Brittany Rife Magalis

Also affiliated with University of Florida, University of Louisville Hospital

Immunology and MicrobiologyBiochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 13 papers. Top paper: “Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable”.

Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2007295117

N/A

0.665DataRank · unranked

83 citations

Sergei L. Kosakovsky Pond, Simone Marini, Brittany Rife Magalis, Anne–Mieke Vandamme, Simon Dellicour +31 more

Contrast-FEL—A Test for Differences in Selective Pressures at Individual Sites among Clades and Sets of Branches

Molecular Biology and Evolution(2020)10.1093/molbev/msaa263

N/A

0.639DataRank · unranked

70 citations

Sadie R Wisotsky, Ananías A. Escalante, Brittany Rife Magalis, Steven Weaver, Sergei L. Kosakovsky Pond

Contrast-FEL – a test for differences in selective pressures at individual sites among clades and sets of branches

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.13.091363

N/A

0.345DataRank · unranked

9 citations

Sadie R Wisotsky, Ananías A. Escalante, Brittany Rife Magalis, Steven Weaver, Sergei L. Kosakovsky Pond

Novel insights on unraveling dynamics of transmission clusters in outbreaks using phylogeny-based methods

Infection Genetics and Evolution(2024)10.1016/j.meegid.2024.105661

N/A

0.208DataRank · unranked

3 citations

Alberto Riva, Simone Marini, Marco Salemi, Mattia Prosperi, Brittany Rife Magalis

Machine Learning Prediction and Phyloanatomic Modeling of Viral Neuroadaptive Signatures in the Macaque Model of HIV-Mediated Neuropathology

Microbiology Spectrum(2023)10.1128/spectrum.03086-22

N/A

0.104DataRank · unranked

1 citations

David A. Ostrov, Marco Salemi, Simone Marini, Brittany Rife Magalis, Andrea S. Ramirez-Mata

Predator-Prey Dynamics of Intra-Host Simian Immunodeficiency Virus Evolution Within the Untreated Host

Frontiers in Immunology(2021)10.3389/fimmu.2021.709962

N/A

0DataRank · unranked

4 citations

Patrick Autissier, Kenneth C. Williams, Xinguang Chen, Cameron J. Browne, Marco Salemi +1 more

Defective HIV DNA genomes provide ancestral relevance critical for phylogenetic inference of reservoir dynamics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.04.490630

N/A

0DataRank · unranked

0 citations

Andrea S Ramirez-Mata, Melanie N. Cash, Jose Estrada, Stephen D. Shank, Adam Browning +5 more

Machine learning prediction and phyloanatomic modeling of viral neuroadaptive signatures in the macaque model of HIV-mediated neuropathology

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.17.496109

N/A

0DataRank · unranked

0 citations

David A. Ostrov, Marco Salemi, Simone Marini, Brittany Rife Magalis, Andrea S. Ramirez-Mata

WITHDRAWN: Defective HIV DNA genomes provide ancestralrelevance critical for phylogenetic inference of reservoir dynamics

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.03.680205

N/A

0DataRank · unranked

0 citations

Andrea S. Ramirez-Mata, Melanie N. Cash, Jose L. Estrada, Stephen D. Shank, A. Browning +5 more

Differing impacts of global and regional responses on SARS-CoV-2 transmission cluster dynamics

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.06.370999

N/A

0DataRank · unranked

7 citations

Andrea S. Ramirez-Mata, Anna Zhukova, Carla Mavian, Simone Marini, Frédéric Lemoine +4 more

Brain tissue transcriptomic analysis of SIV-infected macaques identifies Poly (ADP-ribose) polymerases (PARPs) as potential biomarkers for neuropathogenesis.

(2020)10.21203/rs.3.rs-30629/v1

N/A

0DataRank · unranked

0 citations

Andrea S. Ramirez-Mata, James J. Dollar, David J. Nolan, Shannan N. Rich, Kevin White +9 more

Brain tissue transcriptomic analysis of SIV-infected macaques identifies several altered metabolic pathways linked to neuropathogenesis, and Poly (ADP-ribose) polymerases (PARPs) as potential therapeutic targets

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.21.109140

N/A

0DataRank · unranked

0 citations

Andrea S. Ramirez-Mata, James J. Dollar, David J. Nolan, Kevin White, Shannan N. Rich +9 more

Optimizing viral genome subsampling by genetic diversity and temporal distribution (TARDiS) for phylogenetics

Bioinformatics(2021)10.1093/bioinformatics/btab725

N/A

0DataRank · unranked

17 citations

Carla Mavian, Alberto Riva, Mattia Prosperi, Marco Salemi, Brittany Rife Magalis +1 more