Faruck Morcos

Also affiliated with Center for Systems Biology

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 27 papers. Top paper: “Epistatic contributions promote the unification of incompatible models of neutral molecular evolution”.

Epistatic contributions promote the unification of incompatible models of neutral molecular evolution

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.1913071117

N/A

1.9DataRank · unranked

64 citations

Charisse M. Nartey, Monisha Yuvaraj, Faruck Morcos, Jose Alberto de la Paz

In vivo functional phenotypes from a computational epistatic model of evolution

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2308895121

N/A

0.494DataRank · unranked

26 citations

Charisse M. Nartey, Nicolas Mercado, Jose Alberto de la Paz, Tea Huseinbegovic, Faruck Morcos +1 more

Machine learning in biological physics: From biomolecular prediction to design

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2311807121

N/A

0.396DataRank · unranked

13 citations

M. Mateos, José N. Onuchic, Ivan Coluzza, Faruck Morcos, Jonathan Martin

ELIHKSIR Web Server: Evolutionary Links Inferred for Histidine Kinase Sensors Interacting with Response Regulators

Entropy(2021)10.3390/e23020170

N/A

0.241DataRank · unranked

4 citations

Cheyenne Ziegler, Yun Ho Jung, Xianli Jiang, Faruck Morcos, Claude Sinner

A Single Point Mutation Converts a Proton-pumping Rhodopsin into a Turn-on Fluorescent Sensor for Chloride

ChemRxiv(2020)10.26434/chemrxiv.13028192

N/A

0DataRank · unranked

0 citations

Jessica Lee, Hsichuan Chi, Farah Faizuddin, Sameera Abeyrathna, Qin Zhou +4 more

Coevolutionary methods enable robust design of modular repressors by reestablishing intra-protein interactions

Nature Communications(2021)10.1038/s41467-021-25851-6

N/A

0DataRank · unranked

35 citations

Rey P Dimas, Clement T. Y. Chan, Faruck Morcos, Xianli Jiang

A single point mutation converts a proton-pumping rhodopsin into a red-shifted, turn-on fluorescent sensor for chloride

Chemical Science(2021)10.1039/d0sc06061e

N/A

0DataRank · unranked

26 citations

Jessica Lee, Hsichuan Chi, Farah Faizuddin, Sameera Abeyrathna, Qin Zhou +4 more

Divergence in Dimerization and Activity of Primate APOBEC3C

Journal of Molecular Biology(2021)10.1016/j.jmb.2021.167306

N/A

0DataRank · unranked

4 citations

Mark A. Hix, Sana Suhail, Ben Flath, Brock Boysan, D. R. Williams +6 more

Reply to Patel and Kumar: Epistasis not critical to rate distributions but key in heterotachy, overdispersion, and evolutionary Stokes shift

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2100107118

N/A

0DataRank · unranked

0 citations

Faruck Morcos, Jose Alberto de la Paz

Information Theory in Molecular Evolution: From Models to Structures and Dynamics

(2021)10.3390/books978-3-0365-1212-9

N/A

0DataRank · unranked

0 citations

Faruck Morcos

Computational compensatory mutation discovery approach: Predicting a PARP1 variant rescue mutation

Biophysical Journal(2022)10.1016/j.bpj.2022.05.036

N/A

0DataRank · unranked

8 citations

Xianli Jiang, Emmett M. Leddin, Faruck Morcos, G. Andrés Cisneros, Krithika Ravishankar

Coupling a Live Cell Directed Evolution Assay with Coevolutionary Landscapes to Engineer an Improved Fluorescent Rhodopsin Chloride Sensor

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.20.474067

N/A

0DataRank · unranked

2 citations

Qin Zhou, Jasmine N. Tutol, Shelby M. Phelps, Jessica Lee, Paarth Kapadia +3 more

Latent generative landscapes as maps of functional diversity in protein sequence space

Nature Communications(2023)10.1038/s41467-023-37958-z

N/A

0DataRank · unranked

39 citations

Jonathan Martin, Claude Sinner, Faruck Morcos, Cheyenne Ziegler

In vivo functional phenotypes from a computational epistatic model of evolution

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.24.542176

N/A

0DataRank · unranked

3 citations

Charisse M. Nartey, Nicolas Mercado, Alberto de la Paz, Tea Huseinbegovic, Faruck Morcos +1 more

Coevolutionary Information Captures Catalytic Functions and Reveals Divergent Roles of Terpene Synthase Interdomain Connections

Biochemistry(2024)10.1021/acs.biochem.3c00578

N/A

0DataRank · unranked

5 citations

Hyun Jo Koo, Caroline Laurendon, Hana Z. Shaik, Paul E. O’Maille, Joseph P. Noel +2 more

Designing proteins: Mimicking natural protein sequence heterogeneity

The Journal of Chemical Physics(2024)10.1063/5.0232831

N/A

0DataRank · unranked

1 citations

Jonathan Martin, José N. Onuchic, Faruck Morcos, Ivan Coluzza, M. Mateos

Lipid discovery enabled by sequence statistics and machine learning

eLife(2024)10.7554/elife.94929.3

N/A

0DataRank · unranked

1 citations

Jonathan Martin, Aparna Uppuluri, Luke R. Joyce, Yahan Wei, Ziqiang Guan +3 more

Lipid discovery enabled by sequence statistics and machine learning

eLife(2024)10.7554/elife.94929

N/A

0DataRank · unranked

5 citations

Jonathan Martin, Aparna Uppuluri, Luke R. Joyce, Yahan Wei, Ziqiang Guan +3 more

Reviewer #1 (Public Review): Lipid discovery enabled by sequence statistics and machine learning

(2024)10.7554/elife.94929.1.sa2

N/A

0DataRank · unranked

0 citations

Jonathan Martin, Aparna Uppuluri, Luke R. Joyce, Yahan Wei, Ziqiang Guan +3 more

Author response: Lipid discovery enabled by sequence statistics and machine learning

(2024)10.7554/elife.94929.2.sa0

N/A

0DataRank · unranked

0 citations

Jonathan Martin, Aparna Uppuluri, Luke R. Joyce, Yahan Wei, Ziqiang Guan +3 more

Characterizing DNA recognition preferences of transcription factors using global couplings and high-throughput sequencing

Nucleic Acids Research(2025)10.1093/nar/gkaf592

N/A

0DataRank · unranked

1 citations

Jose Alberto de la Paz, Alexander D. Stanowick, Xingcheng Lin, Faruck Morcos, Qin Zhou

Higher-order epistasis drives evolutionary unpredictability toward novel antibiotic resistance

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.08.663783

N/A

0DataRank · unranked

3 citations

Muhammed Sadik Yildiz, Devin Meng, Jose Alberto de la Paz, Sophia Alvarez, Faruck Morcos +3 more

Generative Landscapes and Dynamics to Design Functional Multidomain Artificial Transmembrane Transporters

ACS Central Science(2025)10.1021/acscentsci.5c00708

N/A

0DataRank · unranked

0 citations

Fariha Hossain, Vladimir V. Volobouev, Gabriele Meloni, Hedieh Torabifard, Faruck Morcos +1 more

Cryo-EM structures of plant Augmin reveal coiled-coil assembly, antiparallel dimerization, and NEDD1 binding

Nature Communications(2025)10.1038/s41467-025-66332-4

N/A

0DataRank · unranked

0 citations

Aryan Taheri, Yuh‐Ru Julie Lee, Yuqi Tang, Shubham Mittal, Fei Guo +5 more

KRAS, NRAS, and BRAF mutation prevalence, clinicopathological association, and their application in a predictive model in Mexican patients with metastatic colorectal cancer: A retrospective cohort study

PLoS ONE(2020)10.1371/journal.pone.0235490

N/A

0DataRank · unranked

48 citations

Xianli Jiang, Elena Yareli Gallegos-Gonzalez, Adriana Carolina Cavazos-González, Yenho Chen, Faruck Morcos +2 more

Frustration and Direct-Coupling Analyses to Predict Formation and Function of Adeno-Associated Virus

Biophysical Journal(2020)10.1016/j.bpj.2020.12.018

N/A

0DataRank · unranked

4 citations

Qin Zhou, Kiara Reyes Gamas, Susan Butler, Carlos Bueno, Nicholas P. Schafer +4 more

A Single Point Mutation Converts a Proton-pumping Rhodopsin into a Turn-on Fluorescent Sensor for Chloride

ChemRxiv(2020)10.26434/chemrxiv.13028192.v1

N/A

0DataRank · unranked

0 citations

Jessica Lee, Hsichuan Chi, Farah Faizuddin, Sameera Abeyrathna, Qin Zhou +4 more