Amir Zarrinpar

Also affiliated with University of California San Diego, La Jolla Bioengineering Institute

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 6%percentile

0.269Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Complete Genome Sequence of an Escherichia coli Strain Isolated from Laboratory Mouse Stool for Use as a Chassis for Transgene Delivery to the Murine Microbiome

Microbiology Resource Announcements(2023)10.1128/mra.01014-22

Top 58%

0.269DataRank

Top 58%5 citations

Baylee J. Russell, R. Alexander Richter, Amir Zarrinpar, Nicole Siguenza

Papers

Driven by 23 papers — median percentile 42. Top paper: “Human Skin, Oral, and Gut Microbiomes Predict Chronological Age”.

Human Skin, Oral, and Gut Microbiomes Predict Chronological Age

mSystems(2020)10.1128/msystems.00630-19

N/A

0.764DataRank · unranked

162 citations

Niina Haiminen, Anna Paola Carrieri, Rebecca Hu, Lingjing Jiang, Laxmi Parida +11 more

Influence of Intermittent Hypoxia/Hypercapnia on Atherosclerosis, Gut Microbiome, and Metabolome

Frontiers in Physiology(2021)10.3389/fphys.2021.663950

N/A

0.533DataRank · unranked

34 citations

Celeste Allaband, Dan Zhou, Orit Poulsen, Cameron Martino, Lingjing Jiang +7 more

Complete Genome Sequence of an Escherichia coli Strain Isolated from Laboratory Mouse Stool for Use as a Chassis for Transgene Delivery to the Murine Microbiome

Microbiology Resource Announcements(2023)10.1128/mra.01014-22

Top 58%

0.269DataRank

Top 58%5 citations

Baylee J. Russell, R. Alexander Richter, Amir Zarrinpar, Nicole Siguenza

Intestinal Transgene Delivery with Native E. coli Chassis Allows Persistent Physiological Changes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.11.468006

N/A

0DataRank · unranked

2 citations

Steven D. Brown, Anand Saran, Irene Mai, Amulya Lingaraju, Nicole Siguenza +12 more

Universal adaptive evolution strategy of probiotic Lactobacillus plantarum to gut selection pressure from humans, mice and zebrafish

Research Square(2021)10.21203/rs.3.rs-106737/v1

N/A

0DataRank · unranked

0 citations

Shuaiming Jiang, Dongxue Huo, Celeste Allaband, Mehrbod Estaki, Victor Cantu +9 more

Diet and feeding pattern modulate diurnal dynamics of the ileal microbiome and transcriptome

Cell Reports(2022)10.1016/j.celrep.2022.111008

N/A

0DataRank · unranked

109 citations

Steven D. Brown, Amulya Lingaraju, Vignesh Sivaganesh, Cameron Martino, Amandine Chaix +10 more

The Gut Microbial Bile Acid Modulation and Its Relevance to Digestive Health and Diseases

Gastroenterology(2023)10.1053/j.gastro.2023.02.022

N/A

0DataRank · unranked

153 citations

Pieter C. Dorrestein, Amir Zarrinpar, Rob Knight, Kelly Fogelson

Obesity, Chronic Stress, and Stress Reduction

Gastroenterology Clinics of North America(2023)10.1016/j.gtc.2023.03.009

N/A

0DataRank · unranked

27 citations

Nicole E. Virzi, Sarah E. Jung, Thomas Rutledge, Amir Zarrinpar, Donald Goens

Live Biotherapeutic Products as Cancer Treatments

Cancer Research(2023)10.1158/0008-5472.can-22-2626

N/A

0DataRank · unranked

22 citations

Amir Zarrinpar, Arianna Brevi

Portosystemic shunt placement reveals blood signatures for the development of hepatic encephalopathy through mass spectrometry

Nature Communications(2023)10.1038/s41467-023-40741-9

N/A

0DataRank · unranked

19 citations

Stephany Flores Ramos, Julia M. Gauglitz, Anne-Marie Fassler, Daniel Petras, Alexander A. Aksenov +10 more

Maximizing the potential of high-throughput next-generation sequencing through precise normalization based on read count distribution

mSystems(2023)10.1128/msystems.00006-23

N/A

0DataRank · unranked

18 citations

Rodolfo A. Salido, Pedro Belda‐Ferre, MacKenzie Bryant, Charles Cowart, Maria D. Tiu +6 more

Pre- and Post-Portosystemic Shunt Placement Metabolomics Reveal Molecular Signatures for the Development of Hepatic Encephalopathy

medRxiv(2023)10.1101/2023.01.02.22281374

N/A

0DataRank · unranked

1 citations

Stephany Flores Ramos, Julia M. Gauglitz, Anne‐Marie Carpenter, Daniel Petras, Alexander A. Aksenov +10 more

Time of sample collection is critical for the replicability of microbiome analyses

Nature Metabolism(2024)10.1038/s42255-024-01064-1

N/A

0DataRank · unranked

51 citations

Amulya Lingaraju, Stephany Flores Ramos, Tanya Kumar, Haniyeh Javaheri, Maria D. Tiu +9 more

Engineered bacterial therapeutics for detecting and treating CRC

Trends in cancer(2024)10.1016/j.trecan.2024.04.001

N/A

0DataRank · unranked

11 citations

Arianna Brevi, Joanna Zhang, Arman Pabani, Abhinav Bhushan, Moumita Das +5 more

Live bacterial therapeutics for detection and treatment of colorectal cancer

Nature Reviews Gastroenterology & Hepatology(2024)10.1038/s41575-024-00901-8

N/A

0DataRank · unranked

9 citations

Jeff Hasty, Amir Zarrinpar, Joanna Zhang

Control of Eating Attributes and Weight Loss Outcomes over One Year After Sleeve Gastrectomy

Obesity Surgery(2024)10.1007/s11695-024-07158-9

N/A

0DataRank · unranked

3 citations

Amir Zarrinpar, Cecilia Dalle Ore, Euyhyun Lee, Keila Yazdani-Boset, Santiago Horgan +2 more

Stronger control of eating 3 months after sleeve gastrectomy predicts successful weight loss outcomes at one year

Obesity Pillars(2024)10.1016/j.obpill.2024.100111

N/A

0DataRank · unranked

0 citations

Amir Zarrinpar, Cecilia Dalle Ore, Euyhyun Lee, Keila Yazdani-Boset, Santiago Horgan +2 more

Gut-derived PPAR-γ signaling and risk of bacterial enteric infection: insight from thiazolidinedione users in a US population-based study

medRxiv(2024)10.1101/2024.09.24.24313682

N/A

0DataRank · unranked

0 citations

David C. Kaelber, Victor Nizet, Amir Zarrinpar, Morgan Birabaharan

Metatranscriptomics uncovers diurnal functional shifts in bacterial transgenes with profound metabolic effects

Cell Host & Microbe(2025)10.1016/j.chom.2025.05.024

N/A

0DataRank · unranked

18 citations

Nicole Siguenza, Wuling Zhong, Ipsita Mohanty, Amulya Lingaraju, R. Alexander Richter +12 more

Expression of Fluorescence Reporters and Natural Products in Native Gut Escherichia coli

ACS Synthetic Biology(2025)10.1021/acssynbio.4c00835

N/A

0DataRank · unranked

6 citations

P Ton, David M. Zong, Amir Zarrinpar, Yousong Ding, Dake Liu

Gut Competition Dynamics of Live Bacterial Therapeutics Are Shaped by Microbiome Complexity, Diet, and Therapeutic Transgenes

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.21.634159

N/A

0DataRank · unranked

0 citations

S. E. R. Bailey, Mohammad Sadegi, Hanna Gootin, Maria D. Tiu, Jeffrey D. Price +3 more

Candidate probiotic Lactiplantibacillus plantarum HNU082 rapidly and convergently evolves within human, mice, and zebrafish gut but differentially influences the resident microbiome

Microbiome(2021)10.1186/s40168-021-01102-0

N/A

0DataRank · unranked

63 citations

Shuaiming Jiang, Dongxue Huo, Celeste Allaband, Mehrbod Estaki, Victor Cantu +10 more

Intermittent Hypoxia and Hypercapnia Alter Diurnal Rhythms of Luminal Gut Microbiome and Metabolome

mSystems(2021)10.1128/msystems.00116-21

N/A

0DataRank · unranked

53 citations

Amulya Lingaraju, Cameron Martino, Baylee J. Russell, Anupriya Tripathi, Orit Poulsen +10 more

Amir Zarrinpar

Indexed papers

Top data-sharing exemplar

Papers