🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Lucas Seninge

University of California, Santa Cruz

ORCID: 0000-0001-6536-6810
Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 8 papers. Top paper: “UCSC Cell Browser: visualize your single-cell data”.

UCSC Cell Browser: visualize your single-cell data

Bioinformatics(2021)10.1093/bioinformatics/btab503
N/A
6.9DataRank · unranked
284 citations

Aparna Bhaduri, Nikolay S. Markov, Pablo Moreno, Tomasz J. Nowakowski, Irene Papatheodorou +6 more

lincRNA-Cox2 Functions to Regulate Inflammation in Alveolar Macrophages during Acute Lung Injury

The Journal of Immunology(2022)10.4049/jimmunol.2100743
N/A
0.457DataRank · unranked
20 citations

Atesh Worthington, Donna Poscablo, Barbara Shapleigh, Mays Mohammed Salih, Haley Halasz +6 more

UCSC Cell Browser: Visualize Your Single-Cell Data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.30.361162
N/A
0.425DataRank · unranked
16 citations

Aparna Bhaduri, Nikolay S. Markov, Pablo Moreno, Tomasz J. Nowakowski, Irene Papatheodorou +5 more

The manatee variational autoencoder model for predicting gene expression alterations caused by transcription factor perturbations

Scientific Reports(2024)10.1038/s41598-024-62620-z
N/A
0.208DataRank · unranked
3 citations

Lucas Seninge, Ziyuan Wang, Anthony Oro, Joshua M. Stuart, Hongxu Ding +1 more

DNARecords: An extensible sparse format for petabyte scale genomics analysis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.13.503863
N/A
0DataRank · unranked
0 citations

Lucas Seninge, Atray Dixit, Andres Manas

A Spatiotemporal and Machine-Learning Platform Accelerates the Manufacturing of hPSC-derived Esophageal Mucosa

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.24.563664
N/A
0DataRank · unranked
1 citations

Carmel Grace McCullough, Lucas Seninge, Lihao Guo, Woo-Joo Kwon, Yongchun Zhang +12 more

A spatiotemporal and machine-learning platform facilitates the manufacturing of hPSC-derived esophageal mucosa

Developmental Cell(2025)10.1016/j.devcel.2024.12.030
N/A
0DataRank · unranked
6 citations

Carmel Grace McCullough, Lucas Seninge, Lihao Guo, Woo-Joo Kwon, Yongchun Zhang +12 more

VEGA is an interpretable generative model for inferring biological network activity in single-cell transcriptomics

Nature Communications(2021)10.1038/s41467-021-26017-0
N/A
0DataRank · unranked
110 citations

Ioannis N. Anastopoulos, Hongxu Ding, Joshua M. Stuart, Lucas Seninge