David Lee

Also affiliated with Cedars-Sinai Medical Center, University of Washington, Washington University in St. Louis, PDL BioPharma (United States), Seattle University, The University of Texas Health Science Center at Houston

MedicineBiochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 30 papers. Top paper: “Circulating monocytes associated with anti-PD-1 resistance in human biliary cancer induce T cell paralysis”.

Circulating monocytes associated with anti-PD-1 resistance in human biliary cancer induce T cell paralysis

Cell Reports(2022)10.1016/j.celrep.2022.111384

N/A

1.1DataRank · unranked

41 citations

Elizabeth McCarthy, Arielle Ilano, Hai Yang, Li Zhang, Kathryn M. Allaire +14 more

Global absence and targeting of protective immune states in severe COVID-19

Nature(2021)10.1038/s41586-021-03234-7

N/A

0.845DataRank · unranked

279 citations

Tristan Courau, Nicholas F. Kuhn, Kenneth H. Hu, Arja Ray, William S. Chen +60 more

XYZeq: Spatially resolved single-cell RNA sequencing reveals expression heterogeneity in the tumor microenvironment

Science Advances(2021)10.1126/sciadv.abg4755

N/A

0.717DataRank · unranked

118 citations

Derek Bogdanoff, Yutong Wang, George C. Hartoularos, Jonathan M. Woo, Cody T. Mowery +14 more

Tracheal aspirate RNA sequencing identifies distinct immunological features of COVID-19 ARDS

Nature Communications(2021)10.1038/s41467-021-25040-5

N/A

0.661DataRank · unranked

81 citations

Stephanie A. Christenson, Ashley Byrne, Eran Mick, Angela Oliveira Pisco, Catherine DeVoe +89 more

SCITO-seq: single-cell combinatorial indexed cytometry sequencing

Nature Methods(2021)10.1038/s41592-021-01222-3

N/A

0.624DataRank · unranked

63 citations

David Lee, Whitney Tamaki, Yang Sun, Anton Ogorodnikov, George C. Hartoularos +8 more

Method of moments framework for differential expression analysis of single-cell RNA sequencing data

Cell(2024)10.1016/j.cell.2024.09.044

N/A

0.561DataRank · unranked

41 citations

Rachel E. Gate, David Lee, Andrew Tolopko, Andrew Lu, Erin Gordon +6 more

Microbial dynamics and pulmonary immune responses in COVID-19 secondary bacterial pneumonia

Nature Communications(2024)10.1038/s41467-024-53566-x

N/A

0.549DataRank · unranked

16 citations

Alexandra Tsitsiklis, Victoria Chu, Hoang Van Phan, Catherine DeVoe, Christina Love +87 more

Global Absence and Targeting of Protective Immune States in Severe COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.28.359935

N/A

0.489DataRank · unranked

25 citations

Tristan Courau, Nicholas F. Kuhn, Kenneth H. Hu, Arja Ray, William S. Chen +34 more

Multiplex generation and single-cell analysis of structural variants in mammalian genomes

Science(2025)10.1126/science.ado5978

N/A

0.470DataRank · unranked

22 citations

Jean‐Benoît Lalanne, Riza M. Daza, Sanjay Kottapalli, Faaiz Quaisar, Jonas Koeppel +5 more

A myeloid program associated with COVID-19 severity is decreased by therapeutic blockade of IL-6 signaling

iScience(2023)10.1016/j.isci.2023.107813

N/A

0.385DataRank · unranked

12 citations

Haridha Shivram, Jason A. Vander Heiden, Christopher C. Overall, Luz D. Orozco, Xia Gao +95 more

Lesion-remote astrocytes govern microglia-mediated white matter repair

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.15.585251

N/A

0.350DataRank · unranked

7 citations

Keshav B. Suresh, Timothy Islam, Ann W. Saustad, Oksana Shelest, Aditya Patil +14 more

Multiplex generation and single cell analysis of structural variants in a mammalian genome

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.22.576756

N/A

0DataRank · unranked

8 citations

Jean‐Benoît Lalanne, Riza M. Daza, Jonas Koeppel, Xiaoyi Li, David Lee +2 more

De Novo Design of Integrin α5β1 Modulating Proteins for Regenerative Medicine

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.21.600123

N/A

0DataRank · unranked

2 citations

Jordi Guillem‐Marti, Saurav Kumar, David Lee, Daniel Cabrerizo‐Aguado, R. Werther +21 more

Combinatorial mapping of E3 ubiquitin ligases to their target substrates

Molecular Cell(2025)10.1016/j.molcel.2025.01.016

N/A

0DataRank · unranked

20 citations

Diego Calderon, David Lee, Melodie Chiu, Shruti Jain, Florence M. Chardon +6 more

Tuning insulin receptor signaling using de novo-designed agonists

Molecular Cell(2025)10.1016/j.molcel.2025.09.020

N/A

0DataRank · unranked

15 citations

Sarah Cardoso, Kaiyong Cai, Preetham Venkatesh, Albert Hung, Michelle Ng +15 more

De Novo Design of Integrin α5β1 Modulating Proteins to Enhance Biomaterial Properties

Advanced Materials(2025)10.1002/adma.202500872

N/A

0DataRank · unranked

7 citations

Jordi Guillem‐Marti, Saurav Kumar, David Lee, Daniel Cabrerizo‐Aguado, R. Werther +21 more

Lower, more frequent cisplatin dosing minimizes hearing loss in head and neck cancer

JCI Insight(2025)10.1172/jci.insight.196230

N/A

0DataRank · unranked

3 citations

Abu Zaffar Chowdhury, Amanda Bonczkowski, Paul Allen, Maura Campbell, David Lee +11 more

Designed NGF mimetics with reduced nociceptive signatures in neurons

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.14.648806

N/A

0DataRank · unranked

6 citations

Aerin Yang, Damien Detraux, David E. Johnson, Chloe J. Peach, Natasha I. Edman +30 more

Multiplex design and discovery of proximity handles for programmable proteome editing

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.13.681693

N/A

0DataRank · unranked

2 citations

Green Ahn, Melodie Chiu, Yi Fu, Shayan Sadre, Jessica J. Simon +6 more

Functional characterization of Alzheimer’s disease genetic variants in microglia

UNC Libraries(2025)10.17615/jm1j-1y96

N/A

0DataRank · unranked

0 citations

Yang Sun, Xiaoyu Yang, Mirunalini Ravichandran, Han Yang, Jia Wen +22 more

Global Absence and Targeting of Protective Immune States in Severe COVID-19.

Research Square(2020)10.21203/rs.3.rs-97042/v1

N/A

0DataRank · unranked

8 citations

Alexis J. Combes, Tristan Courau, Nicholas F. Kuhn, Kenneth H. Hu, Arja Ray +34 more

Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19

Science Translational Medicine(2021)10.1126/scitranslmed.abh2624

N/A

0DataRank · unranked

239 citations

Sara E. Vazquez, George C. Hartoularos, Paul Bastard, Tianna Grant, Raymund Bueno +40 more

Longitudinal single-cell epitope and RNA-sequencing reveals the immunological impact of type 1 interferon autoantibodies in critical COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.09.434529

N/A

0DataRank · unranked

29 citations

Sara E. Vazquez, George C. Hartoularos, Paul Bastard, Tianna Grant, Raymund Bueno +40 more

Pooled screening of CAR T cells identifies non-native signaling domains for next-generation immunotherapies

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.11.451980

N/A

0DataRank · unranked

5 citations

Camillia S. Azimi, Kendall Kearns, Kiavash Garakani, Julie Garcia, Nisarg Patel +8 more

Multi-modal single-cell sequencing identifies cellular immunophenotypes associated with juvenile dermatomyositis disease activity

medRxiv(2021)10.1101/2021.09.18.21263581

N/A

0DataRank · unranked

4 citations

George C. Hartoularos, Daniel Bunis, Yang Sun, David Lee, Hanna Kim +3 more

Multi-Modal Single-Cell Sequencing Identifies Cellular Immunophenotypes Associated With Juvenile Dermatomyositis Disease Activity

Frontiers in Immunology(2022)10.3389/fimmu.2022.902232

N/A

0DataRank · unranked

27 citations

George C. Hartoularos, Daniel Bunis, Yang Sun, David Lee, Hanna Kim +3 more

A myeloid program associated with COVID-19 severity is decreased by therapeutic blockade of IL-6 signaling

medRxiv(2022)10.1101/2022.11.07.22282049

N/A

0DataRank · unranked

0 citations

Haridha Shivram, Jason A. Vander Heiden, Christopher C. Overall, Luz D. Orozco, Xia Gao +49 more

Functional characterization of Alzheimer’s disease genetic variants in microglia

Nature Genetics(2023)10.1038/s41588-023-01506-8

N/A

0DataRank · unranked

76 citations

Jia Wen, Han Yang, Ian Rees Jones, Xiaodong Zhu, Weifang Liu +22 more

Engineered receptors for soluble cellular communication and disease sensing

Nature(2024)10.1038/s41586-024-08366-0

N/A

0DataRank · unranked

57 citations

Mohamad H. Abedi, Maria J Duran Gonzalez, Adam Chazin-Gray, Annie Lin, Iowis Zhu +10 more

Distinct pulmonary and systemic effects of dexamethasone in severe COVID-19

Nature Communications(2024)10.1038/s41467-024-49756-2

N/A

0DataRank · unranked

19 citations

Ravi K. Patel, Aartik Sarma, K. Mark Ansel, Stephanie A. Christenson, Michael Adkisson +75 more