Michael T. Zimmermann

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 46 papers. Top paper: “Somatic PIK3R1 variation as a cause of vascular malformations and overgrowth”.

Somatic PIK3R1 variation as a cause of vascular malformations and overgrowth

Genetics in Medicine(2021)10.1038/s41436-021-01211-z

N/A

0.614DataRank · unranked

59 citations

Nicole R. Bender, Michael T. Zimmermann, Jonathan W. Heusel, Meagan Corliss, Michael Evenson +17 more

Polymorphisms in STING Affect Human Innate Immune Responses to Poxviruses

Frontiers in Immunology(2020)10.3389/fimmu.2020.567348

N/A

0.505DataRank · unranked

28 citations

Iana H. Haralambieva, Inna G. Ovsyannikova, Emily A. Voigt, Beth R. Larrabee, Daniel J. Schaid +4 more

KrasG12D induces changes in chromatin territories that differentially impact early nuclear reprogramming in pancreatic cells

Genome biology(2021)10.1186/s13059-021-02498-6

N/A

0.434DataRank · unranked

17 citations

Romica Kerketta, Thiago M. de Assuncao, Elise Leverence, Atefeh Zeighami, Guillermo Urrutia +7 more

Structural bioinformatics enhances the interpretation of somatic mutations in KDM6A found in human cancers

Computational and Structural Biotechnology Journal(2022)10.1016/j.csbj.2022.04.028

N/A

0.385DataRank · unranked

12 citations

Timothy J. Stodola, Thiago M. de Assuncao, Elise Leverence, Brian C. Smith, Brian F. Volkman +5 more

Inactivation of the Euchromatic Histone-Lysine N-Methyltransferase 2 Pathway in Pancreatic Epithelial Cells Antagonizes Cancer Initiation and Pancreatitis-Associated Promotion by Altering Growth and Immune Gene Expression Networks

Frontiers in Cell and Developmental Biology(2021)10.3389/fcell.2021.681153

N/A

0.360DataRank · unranked

10 citations

Thiago M. de Assuncao, Angela Mathison, Ann Salmonson, Romica Kerketta, Atefeh Zeighami +9 more

Beyond Structural Bioinformatics for Genomics with Dynamics Characterization of an Expanded KRAS Mutational Landscape

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.28.536249

N/A

0.211DataRank · unranked

2 citations

Neshatul Haque, Jessica B. Wagenknecht, Davin R. Jensen, Guadalupe V. Esparza, Elise Leverence +8 more

Integrative Modeling, Molecular Mechanics, and Molecular Dynamics Evaluation of Genomics Variants in KMT2C (MLL3), a Gene Involved in Kleefstra Syndrome Type 2

The FASEB Journal(2022)10.1096/fasebj.2022.36.s1.r5710

N/A

0.104DataRank · unranked

1 citations

Young‐In Chi, Thiago M. de Assuncao, Angela Mathison, Brian F. Volkman, Brian D. Smith +4 more

Hypomorphic RAG2 Deficiency Promotes Selection of Self-Reactive B Cells

Journal of Clinical Immunology(2025)10.1007/s10875-024-01849-9

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0.104DataRank · unranked

1 citations

Christopher M. Tipton, Yasuhiro Yamazaki, Tingting Zhang, Stacey Rylaarsdam, Jennifer Hom +17 more

Emergent properties of the lysine methylome reveal regulatory roles via protein interactions and histone mimicry

Epigenomics(2024)10.1080/17501911.2024.2435244

N/A

0.104DataRank · unranked

1 citations

Young‐In Chi, Angela Mathison, Michael T. Zimmermann, Gwen Lomberk, Raúl Urrutia +1 more

SASH3variants cause a novel form of X-linked combined immunodeficiency with immune dysregulation

Blood(2021)10.1182/blood.2020008629

N/A

0DataRank · unranked

56 citations

Jenna Bergerson, Tomoki Kawai, Hye Sun Kuehn, David H. McDermott, Irene Cortese +30 more

De novo coding variants in the AGO1 gene cause a neurodevelopmental disorder with intellectual disability

Journal of Medical Genetics(2021)10.1136/jmedgenet-2021-107751

N/A

0DataRank · unranked

30 citations

Margot A. Cousin, Nikita R. Dsouza, Thomas D. Challman, Karen E. Wain, Zöe Powis +67 more

Enhanced interpretation of 935 hotspot and non-hotspot RAS variants using evidence-based structural bioinformatics

Computational and Structural Biotechnology Journal(2021)10.1016/j.csbj.2021.12.007

N/A

0DataRank · unranked

10 citations

Nikita R. Dsouza, Angela Mathison, Elise Leverence, Raúl Urrutia, Michael T. Zimmermann +1 more

Computational modeling reveals key molecular properties and dynamic behavior of disruptor of telomeric silencing 1‐like ( DOT1L ) and partnering complexes involved in leukemogenesis

Proteins Structure Function and Bioinformatics(2021)10.1002/prot.26219

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0DataRank · unranked

5 citations

Young‐In Chi, Thiago M. de Assuncao, Elise Leverence, Swarnendu Tripathi, Nikita R. Dsouza +7 more

Defining the Mutational Landscape That Affects the Histone Demethylase KDM6A/UTX in Human Cancer

The FASEB Journal(2022)10.1096/fasebj.2022.36.s1.r5656

N/A

0DataRank · unranked

0 citations

Timothy J. Stodola, Thiago M. de Assuncao, Brian F. Volkman, Brian D. Smith, Angela Mathison +4 more

Epigenomic mechanisms used by KrasG12D to regulate inflammatory gene clusters in epithelial pancreatic cancer cells, which are critical for reprogramming the tumor microenvironment

The FASEB Journal(2022)10.1096/fasebj.2022.36.s1.r5762

N/A

0DataRank · unranked

0 citations

Jenica Abrudan, Guillermo Urrutia, Thiago M. de Assuncao, Angela Mathison, Michael T. Zimmermann +3 more

Transcriptional Landscape Established by the Euchromatic Histone‐lysine N‐methyltransferase Pathway During Pancreas Ontogenesis and Pancreatitis

The FASEB Journal(2022)10.1096/fasebj.2022.36.s1.r5543

N/A

0DataRank · unranked

0 citations

Ann Salmonson, Guillermo Urrutia, Thiago M. de Assuncao, Michael T. Zimmermann, Angela Mathison +2 more

To ChIP, or to CUT, that is the question: Comparative Evaluation of NextGen Methodologies for Studying the genome‐wide distribution of Histone H3 Lysine 9 di‐methyl mark in pancreatic cells

The FASEB Journal(2022)10.1096/fasebj.2022.36.s1.r5476

N/A

0DataRank · unranked

0 citations

Jenica Abrudan, Meijun Du, Thiago M. de Assuncao, Angela Mathison, Michael T. Zimmermann +3 more

The splanchnic mesenchyme is the tissue of origin for pancreatic fibroblasts during homeostasis and tumorigenesis

Nature Communications(2023)10.1038/s41467-022-34464-6

N/A

0DataRank · unranked

355 citations

Yongxia Wu, Kun Fang, Sean Sweeney, Ulyss K. Roesner, Melodie Parrish +14 more

Bi-allelic variants in HMGCR cause an autosomal-recessive progressive limb-girdle muscular dystrophy

The American Journal of Human Genetics(2023)10.1016/j.ajhg.2023.04.006

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0DataRank · unranked

37 citations

Tanya L. Schwab, Sarah K. Macklin‐Mantia, A. Reghan Foley, Filippo Pinto e Vairo, Davut Pehli̇van +25 more

RAG genomic variation causes autoimmune diseases through specific structure-based mechanisms of enzyme dysregulation

iScience(2023)10.1016/j.isci.2023.108040

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0DataRank · unranked

9 citations

Tomoki Kawai, Brian D. Ratnasinghe, Jessica B. Wagenknecht, Raúl Urrutia, Luigi D. Notarangelo +2 more

Beyond structural bioinformatics for genomics with dynamics characterization of an expanded KRAS mutational landscape

Computational and Structural Biotechnology Journal(2023)10.1016/j.csbj.2023.10.003

N/A

0DataRank · unranked

8 citations

Neshatul Haque, Jessica B. Wagenknecht, Davin R. Jensen, Guadalupe Esparza, Elise Leverence +8 more

Deep computational phenotyping of genomic variants impacting the SET domain of KMT2C reveal molecular mechanisms for their dysfunction

Frontiers in Genetics(2023)10.3389/fgene.2023.1291307

N/A

0DataRank · unranked

6 citations

Young‐In Chi, Jose Lizarraga Mazaba, Neshatul Haque, Jessica B. Wagenknecht, Brian C. Smith +6 more

A multi-layered computational structural genomics approach enhances domain-specific interpretation of Kleefstra syndrome variants in EHMT1

Computational and Structural Biotechnology Journal(2023)10.1016/j.csbj.2023.10.022

N/A

0DataRank · unranked

2 citations

Salomão Dória Jorge, Davin R. Jensen, Brian C. Smith, Brian F. Volkman, Angela Mathison +4 more

Writers and readers of H3K9me2 form distinct protein networks during the cell cycle that include candidates for H3K9 mimicry

Bioscience Reports(2023)10.1042/bsr20231093

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0DataRank · unranked

1 citations

Thiago M. de Assuncao, Salomão Dória Jorge, Young‐In Chi, M. Cristine Charlesworth, Benjamin J. Madden +5 more

Overlapping and Distinct Functions of an Extended Repertoire of KRAS Mutations

Research Square(2023)10.21203/rs.3.rs-2883088/v1

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0DataRank · unranked

0 citations

Angela Mathison, Xuan Li, Elise Leverence, Davin R. Jensen, Guadalupe Esparza +6 more

A Multi-Layered Computational Structural Genomics Approach Enhances Domain-Specific Interpretation of Kleefstra Syndrome Variants in EHMT1

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.06.556558

N/A

0DataRank · unranked

0 citations

Salomão Dória Jorge, Davin R. Jensen, Brian C. Smith, Brian F. Volkman, Angela Mathison +4 more

Cancer-associated polybromo-1 bromodomain 4 missense variants variably impact bromodomain ligand binding and cell growth suppression

Journal of Biological Chemistry(2024)10.1016/j.jbc.2024.107146

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0DataRank · unranked

8 citations

Christopher G. Goetz, Guanming Jiao, Raymundo Nuñez, Michael D. Olp, Alisha Dhiman +6 more

Type I interferon signaling promotes radioresistance in head and neck cancer

Translational Cancer Research(2024)10.21037/tcr-23-2104

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0DataRank · unranked

7 citations

Musaddiq Awan, Anne Frei, Becky Massey, Jennifer Bruening, Monica Shukla +7 more

Ehmt2 inactivation in pancreatic epithelial cells shapes the transcriptional landscape and inflammation response of the whole pancreas

Frontiers in Genetics(2024)10.3389/fgene.2024.1412767

N/A

0DataRank · unranked

3 citations

Angela Mathison, Thiago M. de Assuncao, Anju Thomas, Atefeh Zeighami, Ann Salmonson +11 more

Mutant KRAS inhibitors enter the scene of precision therapeutics for pancreatic cancer

Journal of Gastrointestinal Oncology(2024)10.21037/jgo-24-326

N/A

0DataRank · unranked

2 citations

Gwen Lomberk, Angela Mathison, Michael T. Zimmermann, Raúl Urrutia, Gareth Pollin

Changes in Daily Apparent Diffusion Coefficient on Fully Quantitative Magnetic Resonance Imaging Correlate With Established Genomic Pathways of Radiation Sensitivity and Reveal Novel Biologic Associations

International Journal of Radiation Oncology*Biology*Physics(2024)10.1016/j.ijrobp.2024.03.042

N/A

0DataRank · unranked

1 citations

Angela Mathison, Elias DeVoe, Michael Tschannen, Jaime Wendt-Andrae, Michael Straza +13 more

EHMT2 Inactivation in Pancreatic Epithelial Cells Shapes the Transcriptional Landscape and Inflammation Response of the Whole Pancreas

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.14.584700

N/A

0DataRank · unranked

0 citations

Angela Mathison, Thiago M. de Assuncao, Anju Thomas, L. Zeighami, Ann Salmonson +10 more

An Analytical Approach that Combines Knowledge from Germline and Somatic Mutations Enhances Tumor Genomic Reanalyses in Precision Oncology

Journal of Computational Biology(2024)10.1089/cmb.2023.0461

N/A

0DataRank · unranked

0 citations

Honey V. Reddi, Bradley Taylor, Samantha Stachowiak, Jennifer L. Geurts, Ben George +4 more

Tissue-specific co-expression patterns of BAF complex genes across human endocrine and non-endocrine tissues

Endocrine Connections(2025)10.1530/ec-25-0433

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0DataRank · unranked

1 citations

Neshatul Haque, Jessica B. Wagenknecht, Michael T. Zimmermann, Xiaowei Dong

Advancing deep variant phenotyping of mitochondrial enzyme complexes for precision medicine in allogeneic hematopoietic stem-cell transplantation

Transplantation Reports(2025)10.1016/j.tpr.2025.100171

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0DataRank · unranked

0 citations

Michael T. Zimmermann, Neshatul Haque, Shahram Arsang‐Jang, Wael Saber, Xiaowu Gai +2 more

An Integrative Multitiered Computational Analysis for Better Understanding the Structure and Function of 85 Miniproteins

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.31.635936

N/A

0DataRank · unranked

0 citations

Gareth Pollin, Jessica B. Wagenknecht, Raúl Urrutia, Michael T. Zimmermann, Reethika Veluri

POLD1 Deficiency Reveals a Role for POLD1 in DNA Repair and T and B Cell Development

Journal of Clinical Immunology(2020)10.1007/s10875-020-00903-6

N/A

0DataRank · unranked

20 citations

Ottavia M. Delmonte, Vanessa Bundy, Marita Bosticardo, Michael T. Zimmermann, Nikita R. Dsouza +12 more

An integrative multitiered computational analysis for better understanding the structure and function of 85 miniproteins

NAR Genomics and Bioinformatics(2025)10.1093/nargab/lqaf178

N/A

0DataRank · unranked

0 citations

Gareth Pollin, Jessica B. Wagenknecht, Raúl Urrutia, Michael T. Zimmermann, Reethika Veluri

Interaction between Mas1 and AT1RA contributes to enhancement of skeletal muscle angiogenesis by angiotensin-(1-7) in Dahl salt-sensitive rats

PLoS ONE(2020)10.1371/journal.pone.0232067

N/A

0DataRank · unranked

11 citations

Aron M. Geurts, Brian Hoffmann, Marc Casati, Timothy J. Stodola, Nikita R. Dsouza +4 more

Structural bioinformatics enhances mechanistic interpretation of genomic variation, demonstrated through the analyses of 935 distinct RAS family mutations

Bioinformatics(2020)10.1093/bioinformatics/btaa972

N/A

0DataRank · unranked

12 citations

Nikita R. Dsouza, Raúl Urrutia, Michael T. Zimmermann, Swarnendu Tripathi

Impairment of the mitochondrial one-carbon metabolism enzyme SHMT2 causes a novel brain and heart developmental syndrome

Acta Neuropathologica(2020)10.1007/s00401-020-02223-w

N/A

0DataRank · unranked

46 citations

Edgard Verdura, Natalia Juliá‐Palacios, Eric N. Anderson, Leire Goicoechea, Laura Planas‐Serra +33 more

A homozygous missense variant in UBE2T is associated with a mild Fanconi anemia phenotype

Haematologica(2020)10.3324/haematol.2020.259275

N/A

0DataRank · unranked

5 citations

Francis P. Lach, Kimberly A. Rickman, Alejandro Ferrer, Abhishek A. Mangaonkar, Tanya L. Schwab +10 more

Discovery, expression, cellular localization, and molecular properties of a novel, alternative spliced HP1γ isoform, lacking the chromoshadow domain

PLoS ONE(2020)10.1371/journal.pone.0217452

N/A

0DataRank · unranked

7 citations

Thiago M. de Assuncao, Nikita R. Dsouza, Monique Williams, Michael T. Zimmermann, Raúl Urrutia +2 more

Pathogenic SPTBN1 variants cause a novel autosomal dominant neurodevelopmental syndrome

medRxiv(2020)10.1101/2020.08.31.20184481

N/A

0DataRank · unranked

3 citations

Keith A. Breau, Blake A. Creighton, Rebecca C. Spillmann, Erin Torti, Sruthi Dontu +63 more

Polymorphisms in STING affect human innate immune responses to poxviruses

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.28.121657

N/A

0DataRank · unranked

2 citations

Iana H. Haralambieva, Inna G. Ovsyannikova, Emily A. Voigt, Beth R. Larrabee, Daniel J. Schaid +4 more

Pathogenic SPTBN1 variants cause an autosomal dominant neurodevelopmental syndrome

Nature Genetics(2021)10.1038/s41588-021-00886-z

N/A

0DataRank · unranked

108 citations

Blake A. Creighton, Keith A. Breau, Rebecca C. Spillmann, Erin Torti, Sruthi Dontu +70 more