🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Haiqi Chen

Columbia University Irving Medical Center

ORCID: 0000-0001-7179-3229

Also affiliated with Southwestern Medical Center, Institute of Food Science and Technology, Zhejiang Lab, ZheJiang Institute For Food and Drug Control, State Key Laboratory of Food Science and Technology, Zhejiang University, The University of Texas Southwestern Medical Center

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

3.0Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Dissecting mammalian spermatogenesis using spatial transcriptomics

Cell Reports(2021)10.1016/j.celrep.2021.109915

Top 7%

3.0DataRank

Top 7%132 citations

Evan Murray, Anubhav Sinha, Anisha Laumas, Jilong Li, Daniel Lesman +8 more

Papers

Driven by 14 papers — median percentile 93. Top paper: “Dissecting mammalian spermatogenesis using spatial transcriptomics”.

Dissecting mammalian spermatogenesis using spatial transcriptomics

Cell Reports(2021)10.1016/j.celrep.2021.109915

Top 7%

3.0DataRank

Top 7%132 citations

Evan Murray, Anubhav Sinha, Anisha Laumas, Jilong Li, Daniel Lesman +8 more

Cell type-specific inference of differential expression in spatial transcriptomics

Nature Methods(2022)10.1038/s41592-022-01575-3

N/A

0.778DataRank · unranked

178 citations

Evan Murray, Vignesh Shanmugam, Simon Zhang, Luli S. Zou, Michael Diao +5 more

High-resolution Slide-seqV2 spatial transcriptomics enables discovery of disease-specific cell neighborhoods and pathways

iScience(2022)10.1016/j.isci.2022.104097

N/A

0.673DataRank · unranked

88 citations

Teia Noel, Qingbo S. Wang, Haiqi Chen, Evan Murray, Ayshwarya Subramanian +12 more

In vivo hypermutation and continuous evolution

Nature Reviews Methods Primers(2022)10.1038/s43586-022-00130-w

N/A

0.612DataRank · unranked

58 citations

Gordon Rix, Amanuella A. Mengiste, Beatriz Álvarez, Daeje Seo, Haiqi Chen +16 more

Dissecting the spermatogonial stem cell niche using spatial transcriptomics

Cell Reports(2023)10.1016/j.celrep.2023.112737

N/A

0.568DataRank · unranked

43 citations

Xin Zhang, Qiqi Cao, Andre L. Caldeira‐Brant, Xiangfan Zhang, Youngmin Song +7 more

Single-Cell Transcriptomics Reveal Disrupted Kidney Filter Cell-Cell Interactions after Early and Selective Podocyte Injury

American Journal Of Pathology(2021)10.1016/j.ajpath.2021.11.004

N/A

0.449DataRank · unranked

19 citations

Jamie L. Marshall, Yiming Zhou, Mónica S. Montesinos, Haiqi Chen, Lan Nguyễn +3 more

Applications of spatial transcriptomics in studying spermatogenesis

Andrology(2025)10.1111/andr.70043

N/A

0.292DataRank · unranked

6 citations

Haiqi Chen, Qianlan Xu

Cross‐continental transmission and host adaptation of Mycobacterium tuberculosis in China unveiled by population history reconstruction and adaptive evolution signal detection

iMetaOmics(2025)10.1002/imo2.70052

N/A

0.241DataRank · unranked

4 citations

Zhuochong Liu, Haiqi Chen, Yuhan Tang, Zhonghua Jiang, Yiyang Zhang +12 more

In vivo hypermutation and continuous evolution

Nature Reviews Methods Primers(2022)10.1038/s43586-022-00119-5

N/A

0DataRank · unranked

141 citations

Gordon Rix, Amanuella A. Mengiste, Beatriz Álvarez, Daeje Seo, Haiqi Chen +16 more

Subcellular Level Spatial Transcriptomics with PHOTON

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.10.612328

N/A

0DataRank · unranked

2 citations

Qianlan Xu, Qiqi Cao, Xin Zhang, Fei Chen, Sarah Mangiameli +2 more

Subcellular level spatial transcriptomics with PHOTON

Nature Communications(2025)10.1038/s41467-025-59801-3

N/A

0DataRank · unranked

5 citations

Qianlan Xu, Qiqi Cao, Xin Zhang, Fei Chen, Sarah Mangiameli +2 more

Helicase-assisted continuous editing for programmable mutagenesis of endogenous genomes

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.01.577593

N/A

0DataRank · unranked

6 citations

Zeyu Chen, George Wythes, Yifan Zhang, Benno C. Orr, Gary Sun +9 more

Photoselective sequencing: microscopically-guided genomic measurements with subcellular resolution

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.12.507600

N/A

0DataRank · unranked

1 citations

Haiqi Chen, Andrew Earl, Julie A. Dobkin, Daniel Lesman, Jason D. Buenrostro +2 more

Helicase-assisted continuous editing for programmable mutagenesis of endogenous genomes

Science(2024)10.1126/science.adn5876

N/A

0DataRank · unranked

34 citations

Zeyu Chen, George Wythes, Yifan Zhang, Benno C. Orr, Gary Sun +11 more