Thomas J. Hope

Immunology and MicrobiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 39 papers. Top paper: “Functional landscape of SARS-CoV-2 cellular restriction”.

Functional landscape of SARS-CoV-2 cellular restriction

Molecular Cell(2021)10.1016/j.molcel.2021.04.008

N/A

4.8DataRank · unranked

228 citations

Mary K. Lewinski, Lars Pache, Charlotte A. Stoneham, Xin Yin, Mark E. Becker +29 more

Circulating ACE2-expressing extracellular vesicles block broad strains of SARS-CoV-2

Nature Communications(2022)10.1038/s41467-021-27893-2

N/A

4.1DataRank · unranked

170 citations

Andrew D. Hoffmann, Nurmaa K. Dashzeveg, Kathleen M. McAndrews, Paul J. Mehl, Daphne Cornish +31 more

Recognition of HIV-1 capsid by PQBP1 licenses an innate immune sensing of nascent HIV-1 DNA

Molecular Cell(2022)10.1016/j.molcel.2022.06.010

N/A

0.584DataRank · unranked

48 citations

João I. Mamede, Derrick Lau, Narae Ahn, María Teresa Sánchez-Aparicio, Joshua Temple +16 more

TGF-β blockade drives a transitional effector phenotype in T cells reversing SIV latency and decreasing SIV reservoirs in vivo

Nature Communications(2024)10.1038/s41467-024-45555-x

N/A

0.527DataRank · unranked

15 citations

Deepanwita Bose, Mariluz Araínga, Muhammad R. Haque, Christine M. Fennessey, Rachel A Caddell +14 more

PET/CT targeted tissue sampling reveals virus specific dIgA can alter the distribution and localization of HIV after rectal exposure

PLoS Pathogens(2021)10.1371/journal.ppat.1009632

N/A

0.434DataRank · unranked

17 citations

Sixia Xiao, Ann M. Carias, Michael D. McRaven, Divya N. Thakkar, Mariluz Araínga +14 more

Polyclonal Broadly Neutralizing Antibody Activity Characterized by CD4 Binding Site and V3-Glycan Antibodies in a Subset of HIV-1 Virus Controllers

Frontiers in Immunology(2021)10.3389/fimmu.2021.670561

N/A

0.406DataRank · unranked

8 citations

Robert J. Edwards, Celia C. LaBranche, Katayoun Mansouri, Amanda Eaton, S. Moses Dennison +14 more

Localization of infection in neonatal rhesus macaques after oral viral challenge

PLoS Pathogens(2021)10.1371/journal.ppat.1009855

N/A

0.330DataRank · unranked

8 citations

Michael D. McRaven, Ann M. Carias, Meegan R. Anderson, Edgar Matias, Mariluz Araínga +12 more

Deep Gene Sequence Cluster Analyses of Multi-Virus-Infected Mucosal Tissue Reveal Enhanced Transmission of Acute HIV-1

Journal of Virology(2020)10.1128/jvi.01737-20

N/A

0.312DataRank · unranked

7 citations

Immaculate Nankya, Gabrielle Nickel, Annette N. Ratcliff, Adam Meadows, Nicholas J. Hathaway +11 more

Simian Immunodeficiency Virus Susceptibility, Immunology, and Microbiome in the Female Genital Tract of Adolescent Versus Adult Pigtail Macaques

AIDS Research and Human Retroviruses(2021)10.1089/aid.2020.0271

N/A

0.241DataRank · unranked

4 citations

Charlene Miller, Mariluz Araínga, Courtney A. Broedlow, Laura Noël‐Romas, Luca Schifanella +11 more

Endocervix exhibits greater susceptibility to HIV-1 infection compared to ectocervix following ex vivo exposure to Transmitted/Founder HIV-1 variants

PLoS ONE(2025)10.1371/journal.pone.0334510

N/A

0.104DataRank · unranked

1 citations

Michael D. McRaven, Ramón Lorenzo-Redondo, Teresia Muhomah, Ann M. Carias, Muhammad Shoaib Arif +7 more

Anatomic Distribution of Intravenously Injected IgG Takes Approximately 1 Week to Achieve Stratum Corneum Saturation in Vaginal Tissues

The Journal of Immunology(2021)10.4049/jimmunol.2100253

N/A

0DataRank · unranked

10 citations

Jeffrey R. Schneider, Patrick Madden, Ramón Lorenzo-Redondo, Mariluz Araínga, Amarendra Pegu +7 more

Early Colorectal Responses to HIV-1 and Modulation by Antiretroviral Drugs

Vaccines(2021)10.3390/vaccines9030231

N/A

0DataRank · unranked

10 citations

Michael D. McRaven, Ken Laing, Jayne L. Dennis, Thomas J. Hope, Robin J. Shattock +1 more

Development of an In Vivo Probe to Track SARS-CoV-2 Infection in Rhesus Macaques

Frontiers in Immunology(2021)10.3389/fimmu.2021.810047

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0DataRank · unranked

8 citations

Muhammad Arif, Mark E. Becker, Michael D. McRaven, Ann M. Carias, Ramón Lorenzo-Redondo +17 more

Recommendations for measuring HIV reservoir size in cure-directed clinical trials

Nature Medicine(2020)10.1038/s41591-020-1022-1

N/A

0DataRank · unranked

140 citations

Douglas D. Richman, Robert F. Siliciano, Michel C. Nussenzweig, Bonnie J. Howell, Javier Martínez‐Picado +29 more

Th17 T cells and immature dendritic cells are the preferential initial targets after rectal challenge with an SIV-based replication-defective dual-reporter vector

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.27.441720

N/A

0DataRank · unranked

0 citations

Wesley A. Grimm, N. Greco, Michael D. McRaven, Angela J. Fought, Ronald S. Veazey +2 more

Blockade of TGF-β signaling reactivates HIV-1/SIV reservoirs and immune responses in vivo

JCI Insight(2022)10.1172/jci.insight.162290

N/A

0DataRank · unranked

26 citations

Yanique Thomas, Mariluz Araínga, Crystal Carter, Lisa Shirreff, Muhammad Arif +20 more

Bulk IgG glycosylation predicts COVID-19 severity and vaccine antibody response

Cell Reports(2022)10.1016/j.celrep.2022.111799

N/A

0DataRank · unranked

28 citations

Pavan Bhimalli, Byoung-Kyu Cho, Basil Baby Mattamana, Stéphanie Gambut, Imad Tarhoni +16 more

An immunoPET probe to SARS-CoV-2 reveals early infection of the male genital tract in rhesus macaques

Research Square(2022)10.21203/rs.3.rs-1479315/v1

N/A

0DataRank · unranked

11 citations

Yanique Thomas, Robert V. Blair, Sadia Samer, Mark Doyle, Cecily C. Midkiff +13 more

An immunoPET probe to SARS-CoV-2 reveals early infection of the male genital tract in rhesus macaques

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.25.481974

N/A

0DataRank · unranked

7 citations

Yanique Thomas, Robert V. Blair, Sadia Samer, Mark Doyle, Cecily C. Midkiff +13 more

Contribution of 6mer seed toxicity to HIV-1 induced cytopathicity

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.01.510471

N/A

0DataRank · unranked

3 citations

Harry E. Taylor, Thomas J. Hope, Richard T. D’Aquila, Elizabeth T. Bartom, Judd F. Hultquist +2 more

Blockade of TGF-β signaling reactivates HIV-1/SIV reservoirs and immune responses in vivo

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.13.489595

N/A

0DataRank · unranked

1 citations

Yanique Thomas, Mariluz Araínga, CM Carter, LM Shirreff, MS Arif +20 more

Analysis of the Contribution of 6-mer Seed Toxicity to HIV-1-Induced Cytopathicity

Journal of Virology(2023)10.1128/jvi.00652-23

N/A

0DataRank · unranked

9 citations

Harry E. Taylor, Thomas J. Hope, Richard T. D’Aquila, Elizabeth T. Bartom, Judd F. Hultquist +2 more

Temporal and spatial characterization of HIV/SIV infection at anorectal mucosa using rhesus macaque rectal challenge model

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.22.529624

N/A

0DataRank · unranked

1 citations

Lisette Corbin, N. Greco, Ramón Lorenzo-Redondo, Michael D. McRaven, Ronald S. Veazey +2 more

TGF-β blockade drives a transitional effector phenotype in T cells reversing SIV latency and decreasing SIV reservoirs in vivo

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.05.556422

N/A

0DataRank · unranked

1 citations

Deepanwita Bose, Mariluz Araínga, Muhammad R. Haque, Christine M. Fennessey, Rachel A Caddell +14 more

Live imaging of the airway epithelium reveals that mucociliary clearance modulates SARS-CoV-2 spread

Research Square(2023)10.21203/rs.3.rs-3246773/v1

N/A

0DataRank · unranked

0 citations

Mark E. Becker, Laura Martin‐Sancho, Lacy M. Simons, Michael D. McRaven, Sumit K. Chanda +2 more

Transcytosis as a Mechanism of HIV-1 Entry into Columnar Epithelial Explants of the Female Reproductive Tract

AIDS Research and Human Retroviruses(2024)10.1089/aid.2024.0045

N/A

0DataRank · unranked

4 citations

Meegan R. Anderson, Michael D. McRaven, E.J. Allen, Angela J. Fought, Thomas J. Hope +1 more

PET/CT Targeted Tissue Sampling Reveals Intravenously Administered HGN194 IgG1 Affects HIV Distribution after Rectal Exposure

AIDS Research and Human Retroviruses(2024)10.1089/aid.2024.0019

N/A

0DataRank · unranked

2 citations

Sixia Xiao, Ann M. Carias, Michael D. McRaven, Divya N. Thakkar, Mariluz Araínga +17 more

The Global Impact of Diversifying PrEP Options: Results of an International Discrete Choice Experiment of Existing and Potential PrEP Strategies with Gay and Bisexual Men and Physicians

AIDS Research and Human Retroviruses(2024)10.1089/aid.2023.0120

N/A

0DataRank · unranked

3 citations

Rebecca Giguere, Ewa Bryndza Tfaily, Sara Sutton, Elizabeth J. Horn, Robert J. Schieffer +4 more

Vaginal microbiome dysbiosis and sexually transmitted infections correlate with concentrations of immunoglobulin isotypes in human cervicovaginal mucus: insights into HIV-1 transmission

Frontiers in Immunology(2025)10.3389/fimmu.2025.1627807

N/A

0DataRank · unranked

3 citations

Israel Abook, Marianne Mureithi, Janet Kombo, Print Koi, Joel Musando +7 more

Effective prophylaxis of COVID-19 in rhesus macaques using a combination of two parentally-administered SARS-CoV-2 neutralizing antibodies

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.26.445878

N/A

0DataRank · unranked

3 citations

Nicholas J. Maness, Alyssa C. Fears, Jay Rappaport, Pyone P. Aye, Kasi Russell‐Lodrigue +10 more

Design and Testing of a Cabotegravir Implant for HIV Prevention

Journal of Controlled Release(2020)10.1016/j.jconrel.2020.12.024

N/A

0DataRank · unranked

44 citations

Solange M. Simpson, Jonathan T. Su, Ewa Bryndza-Tfaily, Thomas J. Hope, Ronald S. Veazey +7 more

Visualizing Association of the Retroviral Gag Protein with Unspliced Viral RNA in the Nucleus

mBio(2020)10.1128/mbio.00524-20

N/A

0DataRank · unranked

31 citations

Breanna L. Rice, Eunice C. Chen, Kevin M. Tuffy, Estelle Chiari, Kelly M. Fahrbach +3 more

PET/CT targeted tissue sampling reveals virus specific dIgA can alter the distribution and localization of HIV after rectal exposure

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.23.423870

N/A

0DataRank · unranked

0 citations

Sixia Xiao, Ann M. Carias, Michael D. McRaven, Divya N. Thakkar, Mariluz Araínga +14 more

Tenofovir Alafenamide for HIV Prevention: Review of the Proceedings from the Gates Foundation Long-Acting TAF Product Development Meeting

AIDS Research and Human Retroviruses(2021)10.1089/aid.2021.0028

N/A

0DataRank · unranked

25 citations

Marc M. Baum, Zach R. Demkovich, Frank Diana, Charles Dobard, Paul L. Feldman +15 more

Effective Prophylaxis of COVID-19 in Rhesus Macaques Using a Combination of Two Parenterally-Administered SARS-CoV-2 Neutralizing Antibodies

Frontiers in Cellular and Infection Microbiology(2021)10.3389/fcimb.2021.753444

N/A

0DataRank · unranked

19 citations

Nicholas J. Maness, Alyssa C. Fears, Jay Rappaport, Pyone P. Aye, Kasi Russell‐Lodrigue +10 more

Th17 T Cells and Immature Dendritic Cells Are the Preferential Initial Targets after Rectal Challenge with a Simian Immunodeficiency Virus-Based Replication-Defective Dual-Reporter Vector

Journal of Virology(2021)10.1128/jvi.00707-21

N/A

0DataRank · unranked

15 citations

Wesley A. Grimm, N. Greco, Michael D. McRaven, Angela J. Fought, Ronald S. Veazey +2 more

A New Generation of Functional Tagged Proteins for HIV Fluorescence Imaging

Viruses(2021)10.3390/v13030386

N/A

0DataRank · unranked

14 citations

Joseph P. Griffin, Stéphanie Gambut, Thomas J. Hope, João I. Mamede

Blocking α 4 β 7 integrin delays viral rebound in SHIV SF162P3 -infected macaques treated with anti-HIV broadly neutralizing antibodies

Science Translational Medicine(2021)10.1126/scitranslmed.abf7201

N/A

0DataRank · unranked

17 citations

Mariasole Cigoli, Muhammad Arif, Marissa Fahlberg, Stephanie Maldonado, Giulia Calenda +21 more

Functional Homology for Antibody-Dependent Phagocytosis Across Humans and Rhesus Macaques

Frontiers in Immunology(2021)10.3389/fimmu.2021.678511

N/A

0DataRank · unranked

13 citations

Matthew Zirui Tay, R. Whitney Edwards, Derrick Goodman, Andrew R. Crowley, Robert J. Edwards +19 more