Alexandra–Chloé Villani

Also affiliated with Harvard University, Massachusetts General Hospital, Center for Cancer Research, Massachusetts Institute of Technology

MedicineBiochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.847Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The commitment of the human cell atlas to humanity

Nature Communications(2024)10.1038/s41467-024-54306-x

Top 24%

0.847DataRank

Top 24%20 citations

Kristin G. Ardlie, Fabiana Arzuaga, Gordon A. Awandare, Samirkumar B. Amin, Alexander Bernier +38 more

Papers

Driven by 48 papers — median percentile 76. Top paper: “Viral epitope profiling of COVID-19 patients reveals cross-reactivity and correlates of severity”.

Viral epitope profiling of COVID-19 patients reveals cross-reactivity and correlates of severity

Science(2020)10.1126/science.abd4250

N/A

14.5DataRank · unranked

769 citations

Eric Fujimura, Tomasz Kula, Richard T. Timms, I‐Hsiu Lee, Yumei Leng +95 more

Longitudinal proteomic analysis of severe COVID-19 reveals survival-associated signatures, tissue-specific cell death, and cell-cell interactions

Cell Reports Medicine(2021)10.1016/j.xcrm.2021.100287

N/A

7.8DataRank · unranked

311 citations

Arnav Mehta, Alexis M. Schneider, Kyle R. Kays, Jamey Guess, Matteo Gentili +38 more

SARS-CoV-2 viremia is associated with distinct proteomic pathways and predicts COVID-19 outcomes

Journal of Clinical Investigation(2021)10.1172/jci148635

N/A

4.2DataRank · unranked

122 citations

Alexis M. Schneider, Arnav Mehta, Moshe Sade-Feldman, Kyle R. Kays, Matteo Gentili +25 more

Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of ERAP2 transcripts under balancing selection

Genome Research(2018)10.1101/gr.240390.118

N/A

2.3DataRank · unranked

78 citations

Jenny Chen, Rachel E. Gate, Meena Subramaniam, Tushar Bhangale, Mark N. Lee +18 more

Plasma proteomics reveals tissue-specific cell death and mediators of cell-cell interactions in severe COVID-19 patients

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.02.365536

N/A

2.2DataRank · unranked

49 citations

Arnav Mehta, Alexis M. Schneider, Kyle R. Kays, Jamey Guess, Matteo Gentili +38 more

Longitudinal characterization of circulating neutrophils uncovers phenotypes associated with severity in hospitalized COVID-19 patients

Cell Reports Medicine(2022)10.1016/j.xcrm.2022.100779

N/A

1.7DataRank · unranked

70 citations

Anna Gonye, Samuel S. Freeman, Paulina Kapłonek, Irena Gushterova, Kyle R. Kays +27 more

Landscape of X chromosome inactivation across human tissues

bioRxiv (Cold Spring Harbor Laboratory)(2016)10.1101/073957

N/A

1.6DataRank · unranked

52 citations

Angela Yen, Manuel A. Rivas, Jamie L. Marshall, Rahul Satija, Laura Gauthier +17 more

Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq

Science(2016)10.1126/science.aad0501

N/A

1.3DataRank · unranked

5121 citations

Benjamin Izar, Sanjay M. Prakadan, Marc H. Wadsworth, Daniel Treacy, John J. Trombetta +39 more

Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors

Science(2017)10.1126/science.aah4573

N/A

1.2DataRank · unranked

2459 citations

Rahul Satija, Gary Reynolds, Siranush Sarkizova, Karthik Shekhar, James Fletcher +19 more

Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis

Cell(2019)10.1016/j.cell.2019.06.029

N/A

1.1DataRank · unranked

1412 citations

Moshe Biton, Keri M. Sullivan, Grace Burgin, Daniel B. Graham, Rebecca H. Herbst +28 more

Induction of a regulatory myeloid program in bacterial sepsis and severe COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.02.280180

N/A

0.938DataRank · unranked

16 citations

Michael R. Filbin, Roby P. Bhattacharyya, Abraham Sonny, Arnav Mehta, Kianna Billman +14 more

Erratum: Corrigendum: Landscape of X chromosome inactivation across human tissues

Nature(2018)10.1038/nature25993

N/A

0.905DataRank · unranked

15 citations

Angela Yen, Manuel A. Rivas, Jamie L. Marshall, Rahul Satija, Laura Gauthier +17 more

Author Correction: Systematic comparison of single-cell and single-nucleus RNA-sequencing methods

Nature Biotechnology(2020)10.1038/s41587-020-0534-z

N/A

0.875DataRank · unranked

16 citations

Xian Adiconis, Sean K. Simmons, Monika S. Kowalczyk, Cynthia C. Hession, Nemanja Despot Marjanovic +17 more

The commitment of the human cell atlas to humanity

Nature Communications(2024)10.1038/s41467-024-54306-x

Top 24%

0.847DataRank

Top 24%20 citations

Kristin G. Ardlie, Fabiana Arzuaga, Gordon A. Awandare, Samirkumar B. Amin, Alexander Bernier +38 more

Cumulus provides cloud-based data analysis for large-scale single-cell and single-nucleus RNA-seq

Nature Methods(2020)10.1038/s41592-020-0905-x

N/A

0.837DataRank · unranked

264 citations

Joshua Gould, Yiming Yang, Siranush Sarkizova, Marcin Tabaka, Orr Ashenberg +9 more

Obesity-instructed TREM2 high macrophages identified by comparative analysis of diabetic mouse and human kidney at single cell resolution

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.30.446342

N/A

0.768DataRank · unranked

14 citations

Yiming Zhou, Jamie L. Marshall, Maria Alimova, Fan Zhang, Michal Slyper +23 more

A human model of asthma exacerbation reveals transcriptional programs and cell circuits specific to allergic asthma

Science Immunology(2023)10.1126/sciimmunol.abq6352

N/A

0.743DataRank · unranked

141 citations

Neal P. Smith, Tristan Kooistra, Kamil Slowikowski, Isabela Kernin, Jacques Deguine +15 more

Plasma from patients with bacterial sepsis or severe COVID-19 induces suppressive myeloid cell production from hematopoietic progenitors in vitro

Science Translational Medicine(2021)10.1126/scitranslmed.abe9599

N/A

0.701DataRank · unranked

106 citations

Michael R. Filbin, Roby P. Bhattacharyya, Abraham Sonny, Arnav Mehta, Kianna Billman +13 more

SARS-CoV-2 Viremia is Associated with Distinct Proteomic Pathways and Predicts COVID-19 Outcomes

medRxiv(2021)10.1101/2021.02.24.21252357

N/A

0.700DataRank · unranked

10 citations

Alexis M. Schneider, Arnav Mehta, Moshe Sade-Feldman, Kyle R. Kays, Matteo Gentili +25 more

A single-nucleus and spatial transcriptomic atlas of the COVID-19 liver reveals topological, functional, and regenerative organ disruption in patients

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.27.514070

N/A

0.677DataRank · unranked

16 citations

Dimitra Karagkouni, Nikolaos Kalavros, Johannes C. Melms, Sebastian Niezen, Toni Marie Delorey +63 more

Decreased Absolute Lymphocyte Count and Increased Neutrophil/Lymphocyte Ratio With Immune Checkpoint Inhibitor–Associated Myocarditis

Journal of the American Heart Association(2020)10.1161/jaha.120.018306

N/A

0.646DataRank · unranked

73 citations

Amna Zafar, Leyre Zubiri, Daniel A. Zlotoff, Raza M. Alvi, Charlotte Lee +10 more

Immune Responses in Checkpoint Myocarditis Across Heart, Blood, and Tumor

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.15.557794

N/A

0.607DataRank · unranked

12 citations

Daniel A. Zlotoff, Neal P. Smith, Isabela Kernin, Swetha Ramesh, Leyre Zubiri +31 more

Harnessing the Potential of Multiomics Studies for Precision Medicine in Infectious Disease

Open Forum Infectious Diseases(2021)10.1093/ofid/ofab483

N/A

0.557DataRank · unranked

40 citations

Nima Aghaeepour, Roby P. Bhattacharyya, Clary B. Clish, Brice Gaudillière, Nir Hacohen +13 more

Protocol for bulk RNA sequencing of enriched human neutrophils from whole blood and estimation of sample purity

STAR Protocols(2023)10.1016/j.xpro.2023.102125

N/A

0.536DataRank · unranked

16 citations

Thomas J. LaSalle, Samuel S. Freeman, Miguel Reyes, Nir Hacohen, Alexandra–Chloé Villani +2 more

Scaling cross-tissue single-cell annotation models

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.07.561331

N/A

0.469DataRank · unranked

7 citations

David S. Fischer, Evan Biederstedt, Fabian Joachim Theis, Alexandra–Chloé Villani, Felix H. Fischer

Urinary C-X-C-motif ligand 9 (CXCL9) in immune checkpoint inhibitor–associated acute interstitial nephritis

Kidney International(2025)10.1016/j.kint.2025.05.029

N/A

0.434DataRank · unranked

17 citations

Kavita Mistry, Firasat M Alikhan, Sherley M. Mejia, Sagar Sadarangani, Andrew Cao +22 more

SARS-CoV-2 infection elucidates features of pregnancy-specific immunity

Cell Reports(2024)10.1016/j.celrep.2024.114933

N/A

0.419DataRank · unranked

8 citations

Eunha Kim, Rachelly Normand, Guangqing Lu, Lydia L. Shook, Amanda E. Lyall +28 more

A single-nucleus and spatial transcriptomic atlas of the COVID-19 liver reveals topological, functional, and regenerative organ disruption in patients

Genome Biology(2025)10.1186/s13059-025-03499-5

N/A

0.363DataRank · unranked

7 citations

Dimitra Karagkouni, Nikolaos Kalavros, Johannes C. Melms, Sebastian Niezen, Toni Marie Delorey +70 more

Tumor location as a risk factor for severe immune-related adverse events

Journal for ImmunoTherapy of Cancer(2025)10.1136/jitc-2024-011312

N/A

0.312DataRank · unranked

7 citations

Ben Ouyang, Leyre Zubiri, Daniel Leonard, Kamil Slowikowski, Mike Wang +11 more

Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of ERAP2 transcripts under balancing selection

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/188961

N/A

0.305DataRank · unranked

3 citations

Jenny Chen, Rachel E. Gate, Meena Subramaniam, Tushar Bhangale, Mark N. Lee +18 more

Decoding the development of the blood and immune systems during human fetal liver haematopoiesis

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/654210

N/A

0.296DataRank · unranked

5 citations

Rachel A. Botting, Emily Stephenson, Kile Green, Laura Jardine, Emily F. Calderbank +54 more

Single-cell transcriptomic characterization of microscopic colitis

Nature Communications(2025)10.1038/s41467-025-59648-8

N/A

0.208DataRank · unranked

3 citations

Molly F Thomas, Mari Mino–Kenudson, Yuko Kinowaki, Kristin E. Burke, David M. L. Morgan +18 more

Single-cell profiling of human heart and blood in immune checkpoint inhibitor-associated myocarditis.

Journal of Clinical Oncology(2022)10.1200/jco.2022.40.16_suppl.2507

N/A

0.165DataRank · unranked

2 citations

Daniel A. Zlotoff, Neal P. Smith, Swetha Ramesh, Isabela Kernin, Pritha Sen +15 more

Sensory neuronal mTORC1 signaling establishes neuroimmune memory that initiates allergic immunity

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.10.687723

N/A

0.104DataRank · unranked

1 citations

Haibo Yang, Haoting Zhan, Isabela Kernin, Ngoc Anh Le, Dean R Buttaci +14 more

Single-cell RNA sequencing of murine ankle joints over time reveals distinct transcriptional changes following Borrelia burgdorferi infection

iScience(2023)10.1016/j.isci.2023.108217

N/A

0DataRank · unranked

12 citations

Michael J. Walsh, Julie McCarthy, Neal P. Smith, Alice Tirard, Benjamin Y. Arnold +3 more

Gene-based association study of rare variants in children of diverse ancestries implicates TNFRSF21 in the development of allergic asthma

Journal of Allergy and Clinical Immunology(2023)10.1016/j.jaci.2023.10.023

N/A

0DataRank · unranked

10 citations

Jehan Alladina, Neal P. Smith, Cynthia M. Visness, Robert A. Wood, George O'connor +22 more

IL-32 Supports the Survival of Malignant T Cells in Cutaneous T-cell Lymphoma

Journal of Investigative Dermatology(2022)10.1016/j.jid.2022.01.009

N/A

0DataRank · unranked

7 citations

Neal P. Smith, S. Essien, Jessica E. Teague, Pablo Vieyra-Garcia, Ahmed Gehad +11 more

A γδ T cell–IL-3 axis controls allergic responses through sensory neurons

Nature(2024)10.1038/s41586-024-07869-0

N/A

0DataRank · unranked

39 citations

Isabela Kernin, Peri Matatia, Xiangsunze Zeng, David A. Yarmolinsky, Han Cai +15 more

The Known Unknowns of the Immune Response to Coccidioides

Journal of Fungi(2021)10.3390/jof7050377

N/A

0DataRank · unranked

19 citations

George R. Thompson, Alexandra–Chloé Villani, Bo Li, Michael K. Mansour, Marcel Wuethrich +4 more

Antigen Presenting Cells Link the Female Genital Tract Microbiome to Mucosal Inflammation, With Hormonal Contraception as an Additional Modulator of Inflammatory Signatures

Frontiers in Cellular and Infection Microbiology(2021)10.3389/fcimb.2021.733619

N/A

0DataRank · unranked

25 citations

M Fărcăşanu, Seth M. Bloom, Nondumiso Xulu, Jiawu Xu, Barry L. Hykes +15 more

The positive effect of immune checkpoint inhibitor-induced thyroiditis on overall survival accounting for immortal time bias: a retrospective cohort study of 6596 patients

Annals of Oncology(2021)10.1016/j.annonc.2021.05.357

N/A

0DataRank · unranked

41 citations

Donald F. Chute, Ian A. Strohbehn, Sophia Zhao, Michelle Rengarajan, Alexander T. Faje +13 more

Airway basal stem cells are necessary for the maintenance of functional intraepithelial airway macrophages

Cell Reports(2025)10.1016/j.celrep.2025.115860

N/A

0DataRank · unranked

7 citations

Borja Sáez, Marly I. Roche, Alejandro Egea-Zorrilla, Dongzhu Li, Dilanjan Anketell +31 more

A multimodal atlas of COVID-19 severity identifies hallmarks of dysregulated immunity

medRxiv(2025)10.1101/2025.09.19.25334095

N/A

0DataRank · unranked

0 citations

Pritha Sen, Christopher V. Cosgriff, Jessica Tantivit, Thomas Eisenhaure, Thomas J. LaSalle +61 more

Diverse modes of T cell receptor sequence convergence define unique functional and cellular phenotypes

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.31.657155

N/A

0DataRank · unranked

2 citations

Kasi Vegesana, William D. Hazelton, Anastasia A. Minervina, Sebastiaan Valkiers, Kamil Slowikowski +6 more

Immune-parenchymal multicellular niches are shared across distinct thyroid autoimmune diseases

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.03.30.646176

N/A

0DataRank · unranked

0 citations

Rachelly Normand, Hoang Anh Tran, Linda T. Nieman, Benjamin F. Arnold, Michael J. Calcaterra +13 more

Distinct phenotypes and repertoires of bronchoalveolar and airway mucosal T cells in health and allergic asthma

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.08.652962

N/A

0DataRank · unranked

0 citations

Neal P. Smith, Amandine Selle, Roya Best, Sidney Martin, Elizabeth Tuttle +5 more

Germline variants associated with immunotherapy-related adverse events

medRxiv(2022)10.1101/2022.04.10.22273627

N/A

0DataRank · unranked

0 citations

Sarah Abou Alaiwi, Wenxin Xu, Vivek Naranbhai, Amin H. Nassar, Ziad Bakouny +26 more

371 Lymphotoxin-driven cancer cell eradication by tumoricidal CD8+ TIL

Regular and Young Investigator Award Abstracts(2025)10.1136/jitc-2025-sitc2025.0371

N/A

0DataRank · unranked

0 citations

Aiping Jiang, Aonkon Dey, Joseph Dean, Jonathan Perera, Genevieve M. Boland +9 more

Alexandra–Chloé Villani

Indexed papers

Top data-sharing exemplar

Papers