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Protocol for bulk RNA sequencing of enriched human neutrophils from whole blood and estimation of sample purity

STAR Protocols(2023)10.1016/j.xpro.2023.102125Source: DataRank Database

Protocol for bulk RNA sequencing of enriched human neutrophils from whole blood and estimation of sample purity is a research paper published in STAR Protocols (2023). On theSindex it has a DataRank of 0.536. It has been cited 16 times, with 5 citing works in its 1-hop citation network.

N/A

0.536DataRank · unranked

Scored on demand from live citation data

Open Access16 citations · 5 citing works in its network

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Linked data & code

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DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (28 grants)OA: goldTopics (27)IDs (PubMed, PMC)Annotations (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 79%Citation Network 21%

Base Score Contribution

0.425

From this paper's citation signal

Citation Network Contribution

0.111

From 4 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 5 citers.

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Authors (7)

Thomas J. LaSalle ORCID,Samuel S. Freeman ORCID,Miguel Reyes ORCID,Nir Hacohen ORCID,Alexandra–Chloé Villani ORCID

Live enrichment

PubMed:36853705 PMC:PMC9946790

Massachusetts General Hospital

Grant: 2020-216954

Klarman Family Foundation

Grant: T32GM007753

National Institute of Allergy and Infectious Diseases

Grant: R01AI146785

National Institute of Allergy and Infectious Diseases

Grant: 3R37AI080289-11S1

Defining humoral correlates of immunity against COVID-19

National Institutes of Health

Grant: CIVIC75N93019C00052

National Institutes of Health

Grant: T32 GM007592

National Institutes of Health

Grant: U19AI135995-02

National Institutes of Health

Grant: U19AI42790-01

National Cancer Institute

Grant: 1U01CA260476-01

Immunologic Signatures of SARS-CoV-2 Vaccination and Disease

NIAID NIH HHS

Grant: 75N93019C00052

NCI NIH HHS

Grant: U01 CA260476

NIAID NIH HHS

Grant: R37 AI080289

NIAID NIH HHS

Grant: R01 AI042790

NIAID NIH HHS

Grant: U19 AI135995

NHGRI NIH HHS

Grant: T32 HG002295

National Institutes of Health

Grant: 3U19AI135995-04S3

Consortium for Viral Systems Biology (CViSB)

National Institutes of Health

Grant: 3T32GM007753-41S1

Medical Scientist Training Program

National Institutes of Health

Grant: 7R01AI042790-05

CHLAMYDIA PNEUMONIAE AND MACROPHAGES IN ATHEROSCLEROSIS

National Institutes of Health

Grant: 3R01AI146785-02S1

SARS-CoV-2 Variant Testing

National Institutes of Health

Grant: 5T32GM007592-40

Research Training for Anesthetists

American Lung Association

Bristol-Myers Squibb

Massachusetts Consortium on Pathogen Readiness

Massachusetts Institute of Technology

Chan Zuckerberg Initiative

Harvard University

Manton Foundation

National Institute of General Medical Sciences

goldLicense: CC BY NC ND

publisherhttps://api.elsevier.com/content/article/PII:S2666166723000837?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S2666166723000837?httpAccept=text/plain

Unpaywallhttps://doi.org/10.1016/j.xpro.2023.102125

Europe_PMChttps://europepmc.org/articles/PMC9946790

Europe_PMChttps://europepmc.org/articles/PMC9946790?pdf=render

Fields of Study

0301 basic medicine0206 medical engineering02 engineering and technology03 medical and health sciences

MeSH Terms

LeukocytesNeutrophilsHumansSepsisSequence Analysis, RNABase Sequence

Keywords

Molecular biologyCell biologySequence analysisSingle cellBioinformaticscell isolationimmunologyRnaseqScience (General)Base SequenceNeutrophilsSequence Analysis, RNAQ1-390SepsisProtocolLeukocytesHumans