Wing Hung Wong

Biochemistry, Genetics and Molecular BiologyMathematicsComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.892Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

HiChIPdb: a comprehensive database of HiChIP regulatory interactions

Nucleic Acids Research(2022)10.1093/nar/gkac859

Top 23%

0.892DataRank

Top 23%34 citations

Qiao Liu, Qijin Yin, Rui Jiang, Wing Hung Wong, Wanwen Zeng

Papers

Driven by 41 papers — median percentile 77. Top paper: “Dynamic chromatin regulatory landscape of human CAR T cell exhaustion”.

Dynamic chromatin regulatory landscape of human CAR T cell exhaustion

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2104758118

N/A

1.9DataRank · unranked

67 citations

Rachel C. Lynn, Jeff M. Granja, Evan Weber, Maxwell R. Mumbach, Yang Zhao +8 more

Single-cell multi-cohort dissection of the schizophrenia transcriptome

Science(2024)10.1126/science.adg5136

N/A

1.3DataRank · unranked

125 citations

Shahin Mohammadi, José Dávila-Velderrain, Sivan Subburaju, Daniel Reed Tso, Makayla Hourihan +196 more

Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses

Proceedings of the National Academy of Sciences(2001)10.1073/pnas.191502998

N/A

1.2DataRank · unranked

2583 citations

William G. Richards, Jane Staunton, Cheng Li, Stefano Monti, Priya Vasa +16 more

HiChIPdb: a comprehensive database of HiChIP regulatory interactions

Nucleic Acids Research(2022)10.1093/nar/gkac859

Top 23%

0.892DataRank

Top 23%34 citations

Qiao Liu, Qijin Yin, Rui Jiang, Wing Hung Wong, Wanwen Zeng

scJoint integrates atlas-scale single-cell RNA-seq and ATAC-seq data with transfer learning

Nature Biotechnology(2022)10.1038/s41587-021-01161-6

N/A

0.776DataRank · unranked

176 citations

Tung-Yu Wu, Sheng Wan, Jean Y. H. Yang, Wing Hung Wong, Y. X. Rachel Wang +1 more

Regulatory analysis of single cell multiome gene expression and chromatin accessibility data with scREG

Genome biology(2022)10.1186/s13059-022-02682-2

N/A

0.564DataRank · unranked

42 citations

Fengge Chang, Fnu Naqing, Jingxue Xin, Qiao Liu, Wing Hung Wong +1 more

Modeling regulatory network topology improves genome-wide analyses of complex human traits

Nature Communications(2021)10.1038/s41467-021-22588-0

N/A

0.561DataRank · unranked

41 citations

Zhana Duren, Wing Hung Wong, Xiang Zhu

Network Effects of the 15q13.3 Microdeletion on the Transcriptome and Epigenome in Human-Induced Neurons

Biological Psychiatry(2020)10.1016/j.biopsych.2020.06.021

N/A

0.477DataRank · unranked

23 citations

Xianglong Zhang, Carolin Purmann, Shining Ma, Anima Shrestha, Kasey Davis +8 more

Leveraging cell-type-specific regulatory networks to interpret genetic variants in abdominal aortic aneurysm

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2115601119

N/A

0.449DataRank · unranked

19 citations

Xi Chen, Xiang Zhu, Philip S. Tsao, Wing Hung Wong, Shining Ma

DeepCAGE: Incorporating Transcription Factors in Genome-Wide Prediction of Chromatin Accessibility

Genomics Proteomics & Bioinformatics(2022)10.1016/j.gpb.2021.08.015

N/A

0.442DataRank · unranked

18 citations

Kui Hua, Xuegong Zhang, Wing Hung Wong, Rui Jiang, Qiao Liu

EpiGePT: a Pretrained Transformer model for epigenomics

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.15.549134

N/A

0.442DataRank · unranked

18 citations

Qiao Liu, Wanwen Zeng, Rui Jiang, Wing Hung Wong, Zijing Gao

Deterministic evolution and stringent selection during pre-neoplasia

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.09.487529

N/A

0.416DataRank · unranked

15 citations

Moritz J. Przybilla, Eran Kotler, Aziz Khan, Hang Xu, Kremena Karagyozova +13 more

Genetic effects of sequence-conserved enhancer-like elements on human complex traits

Genome biology(2024)10.1186/s13059-023-03142-1

N/A

0.396DataRank · unranked

13 citations

Shining Ma, Wing Hung Wong, Xiang Zhu

scJoint: transfer learning for data integration of atlas-scale single-cell RNA-seq and ATAC-seq

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2020.12.31.424916

N/A

0.312DataRank · unranked

7 citations

Tung-Yu Wu, Sheng Wan, Jean Y. H. Yang, Wing Hung Wong, Y. X. Rachel Wang +1 more

Resolving the 22q11.2 deletion using CTLR-Seq reveals chromosomal rearrangement mechanisms and individual variance in breakpoints

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2322834121

N/A

0.284DataRank · unranked

5 citations

Carolin Purmann, Hanmin Guo, Gi Won Shin, Yi‐Ling Huang, Reenal Pattni +12 more

Simultaneous deep generative modeling and clustering of single cell genomic data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.17.254730

N/A

0.241DataRank · unranked

4 citations

Shengquan Chen, Rui Jiang, Wing Hung Wong, Qiao Liu

Complete and haplotype-specific sequence assembly of segmental duplication-mediated genome rearrangements using CRISPR-targeted ultra-long read sequencing (CTLR-Seq)

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.23.349621

N/A

0.165DataRank · unranked

2 citations

Gi Won Shin, Stephanie Greer, Lisanne Vervoort, Yi‐Ling Huang, Reenal Pattni +6 more

Modeling combinatorial regulation from single-cell multi-omics provides regulatory units underpinning cell type landscape using cRegulon

Genome biology(2025)10.1186/s13059-025-03680-w

N/A

0.104DataRank · unranked

1 citations

Xi Chen, Zhana Duren, Jingxue Xin, Miao Hao, Qiuyue Yuan +3 more

Collaborative Multilabel Classification

Journal of the American Statistical Association(2021)10.1080/01621459.2021.1961783

N/A

0DataRank · unranked

1 citations

Xiaotong Shen, Hui Jiang, Wing Hung Wong, Yunzhang Zhu

Sc-compReg enables the comparison of gene regulatory networks between conditions using single-cell data

Nature Communications(2021)10.1038/s41467-021-25089-2

N/A

0DataRank · unranked

45 citations

Wenhui Sophia Lu, Joseph G. Arthur, Preyas Shah, Jingxue Xin, Francesca Meschi +5 more

Tyrosine kinase inhibitors induce mitochondrial dysfunction during cardiomyocyte differentiation through alteration of GATA4-mediated networks

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.04.077024

N/A

0DataRank · unranked

1 citations

Haodi Wu, Qing-Jun Luo, Chao Jiang, Zhana Duren, Kevin Van Bortle +22 more

Modeling Regulatory Network Topology Improves Genome-Wide Analyses of Complex Human Traits

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.13.990010

N/A

0DataRank · unranked

3 citations

Zhana Duren, Wing Hung Wong, Xiang Zhu

Unfolding the genotype-to-phenotype black box of cardiovascular diseases through cross-scale modeling

iScience(2022)10.1016/j.isci.2022.104790

N/A

0DataRank · unranked

6 citations

Haochen Li, Shengquan Chen, Tingting Lv, Tianxing Ma, Rui Jiang +4 more

Time course regulatory analysis based on paired expression and chromatin accessibility data

Genome Research(2020)10.1101/gr.257063.119

N/A

0DataRank · unranked

64 citations

Xi Chen, Jingxue Xin, Yong Wang, Wing Hung Wong, Zhana Duren

A microwell platform for high-throughput longitudinal phenotyping and selective retrieval of organoids

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.01.514733

N/A

0DataRank · unranked

1 citations

Wing Hung Wong, Scott A. Longwell, Thy Vu, Kasper Karlsson, Daniel A. Mokhtari +8 more

Comprehensive tissue deconvolution of cell-free DNA by deep learning for disease diagnosis and monitoring

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2305236120

N/A

0DataRank · unranked

76 citations

Weihua Zeng, Xiaohui Ni, Qiao Liu, Wenyuan Li, Mary L. Stackpole +17 more

hReg-CNCC reconstructs a regulatory network in human cranial neural crest cells and annotates variants in a developmental context

Communications Biology(2021)10.1038/s42003-021-01970-0

N/A

0DataRank · unranked

22 citations

Zhana Duren, Ziyi Xiong, Sijia Wang, Fan Liu, Wing Hung Wong +2 more

Current and future perspectives of single-cell multi-omics technologies in cardiovascular research

Nature Cardiovascular Research(2023)10.1038/s44161-022-00205-7

N/A

0DataRank · unranked

16 citations

Wei Qiang Seow, Angela Zhang, Siyeon Rhee, Wing Hung Wong, William J. Greenleaf +2 more

Coupled Generation

Journal of the American Statistical Association(2020)10.1080/01621459.2020.1844719

N/A

0DataRank · unranked

2 citations

Xiaotong Shen, Wing Hung Wong, Ben Dai

scTIE: data integration and inference of gene regulation using single-cell temporal multimodal data

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.18.541381

N/A

0DataRank · unranked

3 citations

Tung-Yu Wu, Xi Chen, Sheng Wan, Brian Chao, Jingxue Xin +4 more

Data integration and inference of gene regulation using single-cell temporal multimodal data with scTIE

Genome Research(2023)10.1101/gr.277960.123

N/A

0DataRank · unranked

3 citations

Tung-Yu Wu, Xi Chen, Sheng Wan, Brian Chao, Jingxue Xin +4 more

Model-Based Approach to the Joint Analysis of Single-Cell Data on Chromatin Accessibility and Gene Expression

Statistical Science(2020)10.1214/19-sts714

N/A

0DataRank · unranked

20 citations

Mahdi Zamanighomi, Timothy Daley, Shining Ma, Wing Hung Wong, Zhixiang Lin

An encoding generative modeling approach to dimension reduction and covariate adjustment in causal inference with observational studies

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2322376121

N/A

0DataRank · unranked

7 citations

Zhongren Chen, Wing Hung Wong, Qiao Liu

Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation

Nature Communications(2020)10.1038/s41467-020-18638-8

N/A

0DataRank · unranked

118 citations

Hui Zhang, Yaoxi He, Zhana Duren, Caijuan Bai, Lang Chen +13 more

Prioritizing disease-related rare variants by integrating gene expression data

PLoS Genetics(2024)10.1371/journal.pgen.1011412

N/A

0DataRank · unranked

3 citations

Alexander E. Urban, Wing Hung Wong, Hanmin Guo

Prioritizing disease-related rare variants by integrating gene expression data

Research Square(2024)10.21203/rs.3.rs-4355589/v1

N/A

0DataRank · unranked

0 citations

Alexander E. Urban, Wing Hung Wong, Hanmin Guo

Improving polygenic prediction from whole-genome sequencing data by leveraging predicted epigenomic features

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2419202122

N/A

0DataRank · unranked

4 citations

Hanmin Guo, Qiao Liu, Wing Hung Wong, Wanwen Zeng

Human stem cells with in vivo high plasticity generated by cell–cell communication

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2413043122

N/A

0DataRank · unranked

2 citations

Xi Chen, Jingxue Xin, Bowen Liu, Bo Liu, Min Hu +2 more

A microwell platform for high-throughput longitudinal phenotyping and selective retrieval of organoids

Cell Systems(2023)10.1016/j.cels.2023.08.002

N/A

0DataRank · unranked

18 citations

Wing Hung Wong, Scott A. Longwell, Thy Vu, Kasper Karlsson, Daniel A. Mokhtari +8 more

On the identifiability of the isoform deconvolution problem: application to select the proper fragment length in an RNA-seq library

Bioinformatics(2021)10.1093/bioinformatics/btab873

N/A

0DataRank · unranked

1 citations

Xabier Morales, Pegah Tootoonchi Afshar, Wing Hung Wong, Ángel Rubio, Juan A. Ferrer-Bonsoms

MIMIC: an optimization method to identify cell type-specific marker panel for cell sorting

Briefings in Bioinformatics(2021)10.1093/bib/bbab235

N/A

0DataRank · unranked

4 citations

Zhana Duren, Qiuyue Yuan, Henry Li, Andrew P. Hutchins, Wing Hung Wong +2 more

Wing Hung Wong

Indexed papers

Top data-sharing exemplar

Papers