Jason Gertz

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

4.1Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A human breast cancer-derived xenograft and organoid platform for drug discovery and precision oncology

Nature Cancer(2022)10.1038/s43018-022-00337-6

Top 6%

3.9DataRank

Top 6%400 citations

Maihi Fujita, Andrew Butterfield, Sandra D. Scherer, Matthew H. Bailey, Zhengtao Chu +37 more

Papers

Driven by 42 papers — median percentile 66. Top paper: “A human breast cancer-derived xenograft and organoid platform for drug discovery and precision oncology”.

A human breast cancer-derived xenograft and organoid platform for drug discovery and precision oncology

Nature Cancer(2022)10.1038/s43018-022-00337-6

Top 6%

3.9DataRank

Top 6%400 citations

Maihi Fujita, Andrew Butterfield, Sandra D. Scherer, Matthew H. Bailey, Zhengtao Chu +37 more

ESR1 mutant breast cancers show elevated basal cytokeratins and immune activation

Nature Communications(2022)10.1038/s41467-022-29498-9

N/A

1.9DataRank · unranked

73 citations

Olivia McGinn, Yang Wu, Amir Bahreini, Nolan Priedigkeit, Kai Ding +21 more

Genetic demultiplexing of pooled single-cell RNA-sequencing samples in cancer facilitates effective experimental design

GigaScience(2021)10.1093/gigascience/giab062

N/A

1.5DataRank · unranked

44 citations

Ariel A. Hippen Anderson, Peter F. Hickey, Kristofer C. Berrett, Jason Gertz, Jennifer Anne Doherty +3 more

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

Genome Research(2012)10.1101/gr.136184.111

N/A

1.2DataRank · unranked

2212 citations

Georgi K. Marinov, Anshul Kundaje, Yanxiao Zhang, Florencia Pauli, Serafim Batzoglou +46 more

Architecture of the human regulatory network derived from ENCODE data

Nature(2012)10.1038/nature11245

N/A

1.1DataRank · unranked

1548 citations

Anshul Kundaje, Manoj Hariharan, Stephen G. Landt, Koon-Kiu Yan, Chao Cheng +58 more

ASPSCR1-TFE3 reprograms transcription by organizing enhancer loops around hexameric VCP/p97

Nature Communications(2024)10.1038/s41467-024-45280-5

N/A

0.544DataRank · unranked

11 citations

Li Li, Shiv Prakash Verma, Shuxin Wang, Jared J. Barrott, Mary L. Nelson +33 more

Genetic demultiplexing of pooled single-cell RNA-sequencing samples in cancer facilitates effective experimental design

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.06.371963

N/A

0.479DataRank · unranked

6 citations

Ariel A. Hippen Anderson, Peter F. Hickey, Kristofer C. Berrett, Jason Gertz, Jennifer Anne Doherty +3 more

Comprehensive evaluation and efficient classification of BRCA1 RING domain missense substitutions

The American Journal of Human Genetics(2022)10.1016/j.ajhg.2022.05.004

N/A

0.457DataRank · unranked

20 citations

Andrew Paquette, Kayoko Tao, Russell Bell, Julie L. Boyle, Judith Rosenthal +12 more

FOXA1 Reprogramming Dictates Retinoid X Receptor Response in ESR1 -Mutant Breast Cancer

Molecular Cancer Research(2023)10.1158/1541-7786.mcr-22-0516

N/A

0.360DataRank · unranked

10 citations

Zheqi Li, Abdalla M. Wedn, Allison N. Casey, Daniel D. Brown, Shalini V. Rao +8 more

Estrogen receptor alpha mutations in breast cancer cells cause gene expression changes through constant activity and secondary effects

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.08.032169

N/A

0.312DataRank · unranked

7 citations

Zannel Blanchard, Michelle M. Williams, Kristofer C. Berrett, Zheqi Li, Steffi Oesterreich +3 more

Deconvolution reveals compositional differences in high-grade serous ovarian cancer subtypes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.14.544991

N/A

0.241DataRank · unranked

4 citations

Natalie R. Davidson, Mollie E. Barnard, Lukas M. Weber, Jason Gertz, Jennifer Anne Doherty +3 more

The EstroGene2.0 database for endocrine therapy response and resistance in breast cancer

npj Breast Cancer(2024)10.1038/s41523-024-00709-4

Top 63%

0.216DataRank

Top 63%3 citations

Fangyuan Chen, Li Chen, Jiebin Liu, Danielle Tseng, Fazal Hadi +14 more

Estrogen-induced chromatin looping changes identify a subset of functional regulatory elements

Genome Research(2025)10.1101/gr.279699.124

N/A

0.208DataRank · unranked

3 citations

A. Richey, Jeffery M. Vahrenkamp, Matthew Ginley-Hidinger, Craig M. Rush, Noel Kitchen +3 more

Global expression analysis of endometrial cancer cells in response to progesterone identifies new therapeutic targets

The Journal of Steroid Biochemistry and Molecular Biology(2023)10.1016/j.jsbmb.2023.106399

N/A

0.165DataRank · unranked

2 citations

A.M. Newtson, Eric J. Devor, Yuping Zhang, Paige K. Malmrose, Jianling Bi +13 more

TXNIP loss expands Myc-dependent transcriptional programs by increasing Myc genomic binding

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.04.502753

N/A

0DataRank · unranked

1 citations

Blake R. Wilde, Mallory L. Thomas, Kristin Murphy, Jeffery M. Vahrenkamp, Megan E. Conway +4 more

Characterization of a novel estrogen- and progesterone-responsive endometrial cancer cell line: HCI-EC-23

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.25.505203

N/A

0DataRank · unranked

0 citations

Zannel Blanchard, Jacob T. Polaski, Kyle S. Osborne, Krystle Osby, Jeffery M. Vahrenkamp +8 more

TXNIP loss expands Myc-dependent transcriptional programs by increasing Myc genomic binding

PLoS Biology(2023)10.1371/journal.pbio.3001778

N/A

0DataRank · unranked

14 citations

Blake R. Wilde, Mallory L. Thomas, Kristin Murphy, Jeffery M. Vahrenkamp, Megan E. Conway +4 more

Oct1 cooperates with the Smad family of transcription factors to promote mesodermal lineage specification

Science Signaling(2023)10.1126/scisignal.add5750

N/A

0DataRank · unranked

10 citations

Yifan Wu, Hosiana Abewe, Zuolian Shen, Erik P. Hughes, Jason Gertz +3 more

Estrogen receptor alpha mutations regulate gene expression and cell growth in breast cancer through microRNAs

NAR Cancer(2023)10.1093/narcan/zcad027

N/A

0DataRank · unranked

2 citations

Jacob T. Polaski, Zannel Blanchard, Kyle S. Osborne, Alana L. Welm, Ryan M. O’Connell +2 more

ASPSCR1-TFE3 reprograms transcription by organizing enhancer loops around hexameric VCP/p97

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.29.560242

N/A

0DataRank · unranked

2 citations

Shiv Prakash Verma, Li Li, Shuxin Wang, Jared J. Barrott, Mary L. Nelson +33 more

Cis -regulatory control of transcriptional timing and noise in response to estrogen

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.14.532457

N/A

0DataRank · unranked

1 citations

Hosiana Abewe, Kyle S. Osborne, A. Richey, Noel Kitchen, Katelyn L. Mortenson +5 more

Data from Steroid Hormone Receptor and Infiltrating Immune Cell Status Reveals Therapeutic Vulnerabilities of ESR1-Mutant Breast Cancer

(2023)10.1158/0008-5472.c.6512428.v1

N/A

0DataRank · unranked

0 citations

Nicole S. Spoelstra, Spencer Arnesen, Kathleen O’Neill, Jessica L. Christenson, Jordan Reese +13 more

Data from Estrogen Receptor Alpha Mutations in Breast Cancer Cells Cause Gene Expression Changes through Constant Activity and Secondary Effects

(2023)10.1158/0008-5472.c.6512589.v1

N/A

0DataRank · unranked

0 citations

Zannel Blanchard, Michelle M. Williams, Kristofer C. Berrett, Zheqi Li, Steffi Oesterreich +3 more

Data from Hotspot ESR1 Mutations Are Multimodal and Contextual Modulators of Breast Cancer Metastasis

(2023)10.1158/0008-5472.c.6513817.v1

N/A

0DataRank · unranked

0 citations

Yang‐Chang Wu, Megan E. Yates, Nilgun Tasdemir, Amir Bahreini, Jian Chen +34 more

Estrogen Receptor Alpha Mutations, Truncations, Heterodimers, and Therapies

Endocrinology(2024)10.1210/endocr/bqae051

N/A

0DataRank · unranked

19 citations

Jason Gertz, Rinath Jeselsohn, Sean W. Fanning, Govinda R Hancock

Cis-regulatory control of transcriptional timing and noise in response to estrogen

Cell Genomics(2024)10.1016/j.xgen.2024.100542

N/A

0DataRank · unranked

8 citations

Hosiana Abewe, Kyle S. Osborne, A. Richey, Noel Kitchen, Katelyn L. Mortenson +5 more

Estrogen-induced chromatin looping changes identify a subset of functional regulatory elements

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.12.598690

N/A

0DataRank · unranked

0 citations

A. Richey, Jeffery M. Vahrenkamp, Matthew Ginley-Hidinger, Craig M. Rush, Noel Kitchen +3 more

Progesterone receptor-dependent downregulation of MHC class I promotes tumor immune evasion and growth in breast cancer

Journal for ImmunoTherapy of Cancer(2025)10.1136/jitc-2024-010179

N/A

0DataRank · unranked

7 citations

Harmony Saunders, Lauryn R. Werner, Xiaopeng Sun, Eilidh I Chowanec, Amanda Heard +16 more

349 The Role of Racial Bias in the Utilization of Bedside Ultrasound in the Emergency Department

Annals of Emergency Medicine(2025)10.1016/j.annemergmed.2025.06.364

N/A

0DataRank · unranked

0 citations

Sreedhatri Kandlakunta, Rhiannon Pilkington, Catrin E. Moore, Radina L. Lilova, Jason Gertz +1 more

Estrogen Receptor Alpha Mutations in Breast Cancer Cells Cause Gene Expression Changes through Constant Activity and Secondary Effects

Cancer Research(2020)10.1158/0008-5472.can-20-1171

N/A

0DataRank · unranked

90 citations

Zannel Blanchard, Michelle M. Williams, Kristofer C. Berrett, Zheqi Li, Steffi Oesterreich +3 more

ETV4 Is Necessary for Estrogen Signaling and Growth in Endometrial Cancer Cells

Cancer Research(2020)10.1158/0008-5472.can-19-1382

N/A

0DataRank · unranked

71 citations

Jeffery M. Vahrenkamp, Kristofer C. Berrett, Kathleen A. Clark, Katrin P. Guillen, Sandra D. Scherer +6 more

Steroid Hormone Receptor and Infiltrating Immune Cell Status Reveals Therapeutic Vulnerabilities of ESR1 -Mutant Breast Cancer

Cancer Research(2020)10.1158/0008-5472.can-20-1200

N/A

0DataRank · unranked

62 citations

Nicole S. Spoelstra, Spencer Arnesen, Kathleen O’Neill, Jessica L. Christenson, Jordan Reese +13 more

XPRESSyourself: Enhancing, standardizing, and automating ribosome profiling computational analyses yields improved insight into data

PLoS Computational Biology(2020)10.1371/journal.pcbi.1007625

N/A

0DataRank · unranked

20 citations

Jonathan R. Belyeu, Jeffrey T. Morgan, Yeyun Ouyang, Alex J. Bott, Aaron R. Quinlan +3 more

Regulatory sharing between estrogen receptor α bound enhancers

Nucleic Acids Research(2020)10.1093/nar/gkaa454

N/A

0DataRank · unranked

15 citations

Matthew Ginley-Hidinger, Kristofer C. Berrett, Ryan M. Layer, Aaron R. Quinlan, Jason Gertz +1 more

ESR1 mutant breast cancers show elevated basal cytokeratins and immune activation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.29.424777

N/A

0DataRank · unranked

4 citations

Yang Wu, Amir Bahreini, Nolan Priedigkeit, Kai Ding, Carol A. Sartorius +15 more

Oct1 cooperates with Smad transcription factors to promote mesodermal lineage specification

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.01.406488

N/A

0DataRank · unranked

1 citations

Yifan Wu, Hosiana Abewe, Zuolian Shen, Erik P. Hughes, Jason Gertz +3 more

Brd4-bound enhancers drive cell-intrinsic sex differences in glioblastoma

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2017148118

N/A

0DataRank · unranked

47 citations

Zongtai Qi, Briana C. Prager, Michael Wilkinson, Lauren Broestl, Kristopher Berrett +8 more

A breast cancer patient-derived xenograft and organoid platform for drug discovery and precision oncology

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.28.433268

N/A

0DataRank · unranked

20 citations

Maihi Fujita, Andrew Butterfield, Sandra D. Scherer, Matthew H. Bailey, Zhengtao Chu +37 more

Hotspot ESR1 mutations are multimodal and contextual drivers of breast cancer metastasis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.10.430701

N/A

0DataRank · unranked

5 citations

Yang Wu, Megan E. Yates, Nilgun Tasdemir, Amir Bahreini, Jian Chen +31 more

Hotspot ESR1 Mutations Are Multimodal and Contextual Modulators of Breast Cancer Metastasis

Cancer Research(2022)10.1158/0008-5472.can-21-2576

N/A

0DataRank · unranked

86 citations

Yang Wu, Megan E. Yates, Nilgun Tasdemir, Amir Bahreini, Jian Chen +34 more

Characterization of HCI-EC-23 a novel estrogen- and progesterone-responsive endometrial cancer cell line

Scientific Reports(2022)10.1038/s41598-022-24211-8

N/A

0DataRank · unranked

4 citations

Zannel Blanchard, Jacob T. Polaski, Kyle S. Osborne, Krystle Osby, Jeffery M. Vahrenkamp +8 more

Allele-specific gene regulation, phenotypes, and therapeutic vulnerabilities in estrogen receptor alpha mutant endometrial cancer

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.13.495977

N/A

0DataRank · unranked

2 citations

Craig M. Rush, Spencer Arnesen, Jeffery M. Vahrenkamp, Adriana C. Rodriguez, Elke A. Jarboe +8 more

Jason Gertz

Indexed papers

Top data-sharing exemplar

Papers