Matthew T. Weirauch

Cincinnati Children's Hospital Medical Center

Also affiliated with University of Cincinnati Medical Center

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

14.0Author DataRank

Indexed papers

6in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 6 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Nature(2007)10.1038/nature05874

Top 1%

12.9DataRank

Top 1%5277 citations

J Stamatoyannopoulos, Simon G. Gregory, T Gingeras, Eoghan Harrington, Zhiping Weng +286 more

Papers

Driven by 92 papers — median percentile 40. Top paper: “Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project”.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Nature(2007)10.1038/nature05874

Top 1%

12.9DataRank

Top 1%5277 citations

J Stamatoyannopoulos, Simon G. Gregory, T Gingeras, Eoghan Harrington, Zhiping Weng +286 more

Mechanisms of stearoyl CoA desaturase inhibitor sensitivity and acquired resistance in cancer

Science Advances(2021)10.1126/sciadv.abd7459

N/A

2.2DataRank · unranked

65 citations

Nupur Dasgupta, Priyanka Arora, Kwangmin Choi, Mruniya V. Gawali, Nishtha Gupta +16 more

Global discovery of lupus genetic risk variant allelic enhancer activity

Nature Communications(2021)10.1038/s41467-021-21854-5

N/A

1.7DataRank · unranked

84 citations

Xiaoting Chen, Carmy Forney, Omer Donmez, Daniel Miller, Sreeja Parameswaran +11 more

The Bioperl Toolkit: Perl Modules for the Life Sciences

Genome Research(2002)10.1101/gr.361602

N/A

1.1DataRank · unranked

1704 citations

David Block, Kris Boulez, Steven E. Brenner, Stephen A. Chervitz, Chris Dagdigian +21 more

Gli3 utilizes Hand2 to synergistically regulate tissue-specific transcriptional networks

eLife(2020)10.7554/elife.56450

N/A

0.881DataRank · unranked

33 citations

Xiaoting Chen, Joseph Salomone, Praneet Chaturvedi, Preston A Schultz, Sai K. Balchand +8 more

Lineage tracing of nuclei in skeletal myofibers uncovers distinct transcripts and interplay between myonuclear populations

Nature Communications(2024)10.1038/s41467-024-53510-z

N/A

0.751DataRank · unranked

20 citations

Casey O. Swoboda, Fabian Montecino Morales, Cristofer Calvo, Michael J. Petrany, Sreeja Parameswaran +5 more

Filaggrin loss-of-function variants are associated with atopic dermatitis phenotypes in a diverse, early-life prospective cohort

JCI Insight(2024)10.1172/jci.insight.178258

N/A

0.655DataRank · unranked

22 citations

Latha Satish, Jocelyn M. Biagini, Hassan Chaı̈b, Wan Chi Chang, Phillip J. Dexheimer +17 more

Type I interferon sensing unlocks dormant adipocyte inflammatory potential

Nature Communications(2020)10.1038/s41467-020-16571-4

N/A

0.654DataRank · unranked

77 citations

Michelle S. M. A. Damen, Maria E. Moreno‐Fernandez, Traci E. Stankiewicz, Monica Cappelletti, Pablo C. Alarcon +10 more

Splicing neoantigen discovery with SNAF reveals shared targets for cancer immunotherapy

Science Translational Medicine(2024)10.1126/scitranslmed.ade2886

N/A

0.641DataRank · unranked

71 citations

Shweta Mahajan, Siyuan Ma, Erin D. Jeffery, Xuan Zhang, Anukana Bhattacharjee +8 more

Olaparib Inhibits Tumor Growth of Hepatoblastoma in Patient‐Derived Xenograft Models

Hepatology(2021)10.1002/hep.31919

N/A

0.477DataRank · unranked

23 citations

Maria Prates Rivas, Delphine Nicolle, Aurore Gorse, Ruhi Gulati, Meenasri Kumbaji +7 more

A resource of RNA-binding protein motifs across eukaryotes reveals evolutionary dynamics and gene-regulatory function

Nature Biotechnology(2025)10.1038/s41587-025-02733-6

Top 43%

0.439DataRank

Top 43%13 citations

Debashish Ray, Kaitlin U. Laverty, Cyrus L. Tam, Mihai Albu, Hong Zheng +11 more

Prediction of cooperative homeodomain DNA binding sites from high-throughput-SELEX data

Nucleic Acids Research(2023)10.1093/nar/gkad318

N/A

0.434DataRank · unranked

17 citations

Jordan A. Webb, Zhenyu Yuan, David Cheung, Hee‐Woong Lim, Rhett A. Kovall +3 more

Enhancers with cooperative Notch binding sites are more resistant to regulation by the Hairless co-repressor

PLoS Genetics(2021)10.1371/journal.pgen.1009039

N/A

0.425DataRank · unranked

16 citations

Anna Pyo, Natanel Eafergan, Brittany Cain, Lisa M. Gutzwiller, Ofri Axelrod +7 more

CASCADE: high-throughput characterization of regulatory complex binding altered by non-coding variants

Cell Genomics(2022)10.1016/j.xgen.2022.100098

N/A

0.406DataRank · unranked

14 citations

Heather Hook, Rose Zhao, Jessica L. Keenan, Ashley Penvose, Yemi Osayame +7 more

β‐catenin cancer–enhancing genomic regions axis is involved in the development of fibrolamellar hepatocellular carcinoma

Hepatology Communications(2022)10.1002/hep4.2055

N/A

0.345DataRank · unranked

9 citations

Michael E. Johnston, Maria Prates Rivas, Ashley Cast, Meenasri Kumbaji, Margaret A. Hanlon +19 more

Identification of a regulatory pathway governing TRAF1 via an arthritis-associated non-coding variant

Cell Genomics(2023)10.1016/j.xgen.2023.100420

N/A

0.312DataRank · unranked

7 citations

Marta Martínez‐Bonet, Taehyeung Kim, Jeffrey A. Sparks, Kazuyoshi Ishigaki, Xiaoting Chen +21 more

Cross-platform motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors

Communications Biology(2025)10.1038/s42003-025-08909-9

Top 58%

0.269DataRank

Top 58%5 citations

Ivan Kozin, Sergey Abramov, Alexandr Boytsov, Arttu Jolma, Mihai Albu +46 more

VExD: a curated resource for human gene expression alterations following viral infection

G3 Genes Genomes Genetics(2023)10.1093/g3journal/jkad176

Top 61%

0.241DataRank

Top 61%4 citations

Mario Pujato, Krishna M. Roskin, Matthew T. Weirauch, Phillip J. Dexheimer

Macrophage epigenetic memories of early life injury drive neonatal nociceptive priming

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.13.528015

N/A

0.241DataRank · unranked

4 citations

Adewale Oluwaseun Fadaka, Anna M. Warshak, Aditi Paranjpe, Benjamin Weinhaus, Luis F. Queme +10 more

maxATAC: genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.28.478235

N/A

0.208DataRank · unranked

3 citations

Faiz W. Rizvi, Balaji Iyer, Xiaoting Chen, Michael Kotliar, Anthony T. Bejjani +10 more

Human cytomegalovirus infection coopts chromatin organization to diminish TEAD1 transcription factor activity

eLife(2024)10.7554/elife.101578

N/A

0.176DataRank · unranked

2 citations

Sreeja Parameswaran, Matthew J. Beucler, Lee Edsall, Andrew VonHandorf, Audrey Crowther +19 more

TET1 regulates responses to house dust mite by altering chromatin accessibility, DNA methylation, and gene expression in airway epithelial cells

Research Square(2023)10.21203/rs.3.rs-3726852/v1

N/A

0.165DataRank · unranked

2 citations

Sreeja Parameswaran, Lucy P. Cai, Sweeney Elston, Chi Hoa Pham, Artem Barski +3 more

Nutrient starvation activates ECM remodeling gene enhancers associated with inflammatory bowel disease risk in fibroblasts

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.06.611754

N/A

0.165DataRank · unranked

2 citations

Vera Beilinson, Xiaoting Chen, Zi Yang, Joseph A. Wayman, Jasbir Dhaliwal +7 more

Diaci v3.0: chromosome-level assembly, de novo transcriptome, and manual annotation of Diaphorina citri, insect vector of Huanglongbing

GigaScience(2024)10.1093/gigascience/giae109

N/A

0.165DataRank · unranked

2 citations

Prashant S. Hosmani, Mirella Flores-Gonzalez, Marina Mann, Sherry Miller, Matthew T. Weirauch +56 more

GENCODE: Creating a Validated Manually Annotated Geneset for the Whole Human Genome

Nature Precedings(2009)10.1038/npre.2009.3155.1

Top 71%

0.128DataRank

Top 71%1 citations

Giulio Formenti, Rizi Ai, Nicholas J. Dickens, Genome Institute at Washington University, Michael Tress +45 more

After the Infection: A Survey of Pathogens and Non-communicable Human Disease

medRxiv(2023)10.1101/2023.09.14.23295428

Top 72%

0.111DataRank

Top 72%1 citations

Daniel Schnell, Sreeja Parameswaran, Kevin Ernst, Shannon K. O’Connor, Nathan Salomonis +5 more

Genome-wide epigenetic profiling and transcriptome analysis in pediatric Obstructive Sleep Apnea: A focus on Black female children

Heliyon(2024)10.1016/j.heliyon.2024.e40830

N/A

0.104DataRank · unranked

1 citations

Sreeja Parameswaran, Omer A. Donmez, Carmy Forney, Hope Rowden, Charles A. Moore +7 more

Silencing TET1 expression alters the epigenomic landscape and amplifies transcriptomic responses to allergen in airway epithelial cells

Current Zoology(2025)10.1093/eep/dvaf007

N/A

0.104DataRank · unranked

1 citations

Sreeja Parameswaran, Lucy P. Cai, Sweeney Elston, Chi Hoa Pham, Artem Barski +3 more

1502 Genetic predisposition to lupus across ancestries has >300 separable genetic contributions: what we know today

Abstracts(2021)10.1136/lupus-2021-lupus21century.85

N/A

0DataRank · unranked

2 citations

Leah C. Kottyan, Matthew T. Weirauch, Kenneth M. Kaufman, John B. Harley, Viktoryia Laurynenka

1503 High-throughput identification of regulatory functional Snps associated with systemic lupus erythematosus

Abstracts(2021)10.1136/lupus-2021-lupus21century.86

N/A

0DataRank · unranked

0 citations

Marta Martínez‐Bonet, Matthew T. Weirauch, Peter A. Nigrović, Qiang Wang

Gene–environment interactions and their impact on human health

Genes and Immunity(2022)10.1038/s41435-022-00192-6

N/A

0DataRank · unranked

298 citations

Andrew VonHandorf, Kenyatta C. M. F. Viel, Matthew T. Weirauch, Leah C. Kottyan, Samuel J. Virolainen

“Stripe” transcription factors provide accessibility to co-binding partners in mammalian genomes

Molecular Cell(2022)10.1016/j.molcel.2022.06.029

N/A

0DataRank · unranked

73 citations

Supriya V. Vartak, A. Conte, Xiang Wang, David A. Garcia, Evan Stevens +20 more

Multiancestral polygenic risk score for pediatric asthma

Journal of Allergy and Clinical Immunology(2022)10.1016/j.jaci.2022.03.035

N/A

0DataRank · unranked

50 citations

Michael Lape, Edyta Małolepsza, Stanley B. DeVore, Matthew T. Weirauch, Ozan Dikilitas +19 more

Definition of germ layer cell lineage alternative splicing programs reveals a critical role for Quaking in specifying cardiac cell fate

Nucleic Acids Research(2022)10.1093/nar/gkac327

N/A

0DataRank · unranked

20 citations

Naiyou Liu, Ulrich Braunschweig, Karen Larissa Pereira de Castro, Xiaoting Chen, Frederick S. Ditmars +9 more

Epigenetic and transcriptional dysregulation in CD4+ T cells in patients with atopic dermatitis

PLoS Genetics(2022)10.1371/journal.pgen.1009973

N/A

0DataRank · unranked

15 citations

Sreeja Parameswaran, Carmy Forney, Lee Edsall, Daniel Miller, Rebekah Karns +14 more

High-resolution promoter interaction analysis implicates genes involved in the activation of Type 3 Innate Lymphoid Cells in autoimmune disease risk

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.19.512842

N/A

0DataRank · unranked

5 citations

Helen Ray-Jones, Nora Lakes, Rachel A. Brown, Tareian Cazares, Owen Clay +30 more

maxATAC: Genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks

PLoS Computational Biology(2023)10.1371/journal.pcbi.1010863

N/A

0DataRank · unranked

41 citations

Faiz W. Rizvi, Balaji Iyer, Xiaoting Chen, Michael Kotliar, Anthony T. Bejjani +10 more

Effector memory T cells induce innate inflammation by triggering DNA damage and a non-canonical STING pathway in dendritic cells

Cell Reports(2023)10.1016/j.celrep.2023.113180

N/A

0DataRank · unranked

30 citations

Kathrynne A. Warrick, Andrew VonHandorf, Charles N. Vallez, Kiana Kawarizadeh, Irene Saha +6 more

Nuclear RNA catabolism controls endogenous retroviruses, gene expression asymmetry, and dedifferentiation

Molecular Cell(2023)10.1016/j.molcel.2023.10.036

N/A

0DataRank · unranked

20 citations

Yesai Fstkchyan, Jessica Ho, Youngseo Cheon, Roosheel S. Patel, Emma J. DeGrace +41 more

Single cell transcriptomic analysis of HPV16-infected epithelium identifies a keratinocyte subpopulation implicated in cancer

Nature Communications(2023)10.1038/s41467-023-37377-0

N/A

0DataRank · unranked

31 citations

Tafadzwa Chihanga, A Carlile, Robert Jackson, Marion G. Brusadelli, Denis Lee +29 more

A functional mechanism for a non-coding variant near AGTR2 associated with risk for preterm birth

BMC Medicine(2023)10.1186/s12916-023-02973-w

N/A

0DataRank · unranked

1 citations

Robert M. Rossi, Xiaoting Chen, Jing Chen, Jilian Runyon, Mehak Chawla +11 more

Aryl Hydrocarbon Receptor Suppresses Eosinophilic Esophagitis Responses through OVOL1 and SPINK7

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.17.541192

N/A

0DataRank · unranked

3 citations

Andrea M. Klingler, Mark Rochman, Misu Paul, Julie M. Caldwell, Michael Brusilovsky +9 more

Lineage tracing of newly accrued nuclei in skeletal myofibers uncovers distinct transcripts and interplay between nuclear populations

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.24.554609

N/A

0DataRank · unranked

3 citations

Casey O. Swoboda, Michael J. Petrany, Sreeja Parameswaran, Andrew VonHandorf, Matthew T. Weirauch +3 more

High-throughput identification of functional regulatory SNPs in systemic lupus erythematosus

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.16.553538

N/A

0DataRank · unranked

0 citations

Taehyeung Kim, Marta Martínez‐Bonet, Vitor R. C. Aguiar, Sangwan Sim, Jing Cui +10 more

Macrophage memories of early-life injury drive neonatal nociceptive priming

Cell Reports(2024)10.1016/j.celrep.2024.114129

N/A

0DataRank · unranked

21 citations

Adewale Oluwaseun Fadaka, Anna M. Warshak, Aditi Paranjpe, Benjamin Weinhaus, Luis F. Queme +10 more

Systematic identification of genotype-dependent enhancer variants in eosinophilic esophagitis

The American Journal of Human Genetics(2024)10.1016/j.ajhg.2023.12.008

N/A

0DataRank · unranked

16 citations

Xiaoming Lu, Xiaoting Chen, Sreeja Parameswaran, Lee Edsall, Michael P. Trimarchi +10 more

Non-coding autoimmune risk variant defines role for ICOS in T peripheral helper cell development

Nature Communications(2024)10.1038/s41467-024-46457-8

N/A

0DataRank · unranked

12 citations

Marta Martínez‐Bonet, Qiang Wang, Nicolaj Hackert, Jeffrey A. Sparks, Yuriy Baglaenko +13 more

High-throughput identification of functional regulatory SNPs in systemic lupus erythematosus

Nature Communications(2024)10.1038/s41467-024-50710-5

N/A

0DataRank · unranked

7 citations

Taehyeung Kim, Marta Martínez‐Bonet, Vitor R. C. Aguiar, S.I. Sim, Jing Cui +10 more

Accessible chromatin maps of inflammatory bowel disease intestine nominate cell-type mediators of genetic disease risk

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.09.579678

N/A

0DataRank · unranked

4 citations

Zi Yang, Elizabeth Angerman, Erin Bonkowski, Ingrid Jurickova, Xiaoting Chen +11 more

Human cytomegalovirus infection coopts chromatin organization to diminish TEAD1 transcription factor activity

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.12.588762

N/A

0DataRank · unranked

2 citations

Sreeja Parameswaran, Matthew J. Beucler, Lee Edsall, Andrew VonHandorf, Audrey Crowther +19 more

Cross-platform DNA motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.11.619379

N/A

0DataRank · unranked

1 citations

Ivan Kozin, Sergey Abramov, Alexandr Boytsov, Arttu Jolma, Mihai Albu +29 more

Update on the genetics of allergic diseases

Journal of Allergy and Clinical Immunology(2025)10.1016/j.jaci.2025.03.012

N/A

0DataRank · unranked

20 citations

Sreeja Parameswaran, Ronald Allan M. Panganiban, Gregory Constantine, Matthew T. Weirauch, Leah C. Kottyan +1 more

CisBP-RNA: a web resource for eukaryotic RNA-binding proteins and their motifs

Nucleic Acids Research(2025)10.1093/nar/gkaf1081

N/A

0DataRank · unranked

12 citations

Mihai Albu, Xiaoting Chen, Alexander Sasse, Kaitlin U. Laverty, Debashish Ray +7 more

A survey of pathogenic involvement in non-communicable human diseases

Communications Medicine(2025)10.1038/s43856-025-00956-x

N/A

0DataRank · unranked

6 citations

Dan Schnell, Sreeja Parameswaran, Kevin Ernst, Shannon K. O’Connor, Nathan Salomonis +5 more

Starvation activates ECM-remodeling gene transcription and putative enhancers in fibroblasts despite inducing quiescence

Cell Reports(2025)10.1016/j.celrep.2025.115896

N/A

0DataRank · unranked

6 citations

Vera Beilinson, Xiaoting Chen, Melanie Gucwa, Lee A. Denson, Emily R. Miraldi +3 more

Epigenetic and transcriptional programming of murine eosinophils in the esophagus

Nature Communications(2025)10.1038/s41467-025-65440-5

N/A

0DataRank · unranked

6 citations

Lee Edsall, Ty D. Troutman, Lydia E. Mack, Michael Kotliar, Netali Ben-Baruch Morgenstern +15 more

GDF10 promotes rodent cardiomyocyte maturation during the postnatal period

Journal of Molecular and Cellular Cardiology(2025)10.1016/j.yjmcc.2025.01.010

N/A

0DataRank · unranked

3 citations

Maria L Spaeth, Marissa Granitto, Brittany A. Gonzalez, Matthew T. Weirauch, Leah C. Kottyan +2 more

Cardiomyocyte-expressed TGFβ signals to fibroblasts to program early heart maturation and adult myocyte identity

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.22.677845

N/A

0DataRank · unranked

2 citations

Rajesh K. Kasam, Casey O. Swoboda, Vikram Prasad, Kelly M. Grimes, N. Scott Blair +14 more

Multi-trait Analysis of GWAS Expands Eosinophilic Esophagitis Genetic Susceptibility and Polygenic Risk Scores

Research Square(2025)10.21203/rs.3.rs-6630283/v1

N/A

0DataRank · unranked

1 citations

Bahram Namjou, Netali Ben-Baruch Morgenstern, Mark Rochman, Xiaoting Chen, G. A. Osswald +12 more

β-Catenin–Cohesin Ring–CEGRs/ALCDs Axis Activation Contributes to the Development of Hepatoblastoma and Fibrolamellar HCC

Molecular Cancer Research(2025)10.1158/1541-7786.mcr-25-0236

N/A

0DataRank · unranked

0 citations

Ruhi Gulati, Kristi Jennings, Ina Kycia, Alex Bondoc, Greg Tiao +6 more

Genome-wide discovery of multiple sclerosis genetic risk variant allelic regulatory activity

G3 Genes Genomes Genetics(2025)10.1093/g3journal/jkaf192

N/A

0DataRank · unranked

0 citations

Lois Parks, Molly Shook, Carmy Forney, Xiaoting Chen, Lee Edsall +8 more

Massively parallel analysis of genotype-dependent enhancer activity among atopic dermatitis genetic risk variants

Journal of Allergy and Clinical Immunology(2025)10.1016/j.jaci.2025.07.032

N/A

0DataRank · unranked

0 citations

Xiaoming Lu, Xiaoting Chen, Lee Edsall, Marissa Granitto, Samuel J. Virolainen +14 more

Human cytomegalovirus infection coopts chromatin organization to diminish TEAD1 transcription factor activity

eLife(2025)10.7554/elife.101578.2

N/A

0DataRank · unranked

0 citations

Sreeja Parameswaran, Matthew J. Beucler, Lee Edsall, Andrew VonHandorf, Audrey Crowther +19 more

Human cytomegalovirus infection coopts chromatin organization to diminish TEAD1 transcription factor activity

eLife(2025)10.7554/elife.101578.3

N/A

0DataRank · unranked

0 citations

Sreeja Parameswaran, Matthew J. Beucler, Lee Edsall, Andrew VonHandorf, Audrey Crowther +19 more

Convergent DNA methylation abnormalities at enhancers and bivalent promoters in human growth disorders

Epigenetics & Chromatin(2025)10.1186/s13072-025-00650-1

N/A

0DataRank · unranked

0 citations

Yoshiko Takahashi, Jihye Lee, Camille T. Perez, X. CHEN, Yuri Lee +8 more

Meta-analysis of 208370 East Asians identifies 113 susceptibility loci for systemic lupus erythematosus

Annals of the Rheumatic Diseases(2020)10.1136/annrheumdis-2020-219209

N/A

0DataRank · unranked

180 citations

Kwangwoo Kim, Hiroyuki Suetsugu, So‐Young Bang, Leilei Wen, Masaru Koido +82 more

Single-nucleus RNA-seq identifies transcriptional heterogeneity in multinucleated skeletal myofibers

Nature Communications(2020)10.1038/s41467-020-20063-w

N/A

0DataRank · unranked

408 citations

Casey O. Swoboda, Chengyi Sun, Kashish Chetal, Xiaoting Chen, Matthew T. Weirauch +3 more

The genetic etiology of eosinophilic esophagitis

Journal of Allergy and Clinical Immunology(2020)10.1016/j.jaci.2019.11.013

N/A

0DataRank · unranked

93 citations

Sreeja Parameswaran, Matthew T. Weirauch, Marc E. Rothenberg, Lisa J. Martin, Leah C. Kottyan

Human Virus Transcriptional Regulators

Cell(2020)10.1016/j.cell.2020.06.023

N/A

0DataRank · unranked

89 citations

Ted Hong, Sreeja Parameswaran, Kevin Ernst, Ivan Marazzi, Matthew T. Weirauch +2 more

Molecular mechanisms underlying milk production and viviparity in the cockroach, Diploptera punctata

Insect Biochemistry and Molecular Biology(2020)10.1016/j.ibmb.2020.103333

N/A

0DataRank · unranked

11 citations

Matthew W. Korthauer, Jacob M. Hendershot, Samuel T. Bailey, Matthew T. Weirauch, José M. C. Ribeiro +2 more

Disease-associated KIF3A variants alter gene methylation and expression impacting skin barrier and atopic dermatitis risk

Nature Communications(2020)10.1038/s41467-020-17895-x

N/A

0DataRank · unranked

40 citations

Zhonghua Zhang, Elisabet Johansson, Samriddha Ray, Amrita Jagpal, Brandy Ruff +10 more

Nasal DNA methylation differentiates severe from non‐severe asthma in African‐American children

Allergy(2020)10.1111/all.14655

N/A

0DataRank · unranked

36 citations

Xue Zhang, Xiaoting Chen, Anthony P. Brown, Matthew T. Weirauch, Theresa W. Guilbert +4 more

Comprehensive Review of Steroid-Sensitive Nephrotic Syndrome Genetic Risk Loci and Transcriptional Regulation as a Possible Mechanistic Link to Disease Risk

Kidney International Reports(2020)10.1016/j.ekir.2020.09.048

N/A

0DataRank · unranked

5 citations

Sreeja Parameswaran, Amy Eapen, Xiaoting Chen, John B. Harley, Prasad Devarajan +3 more

Single-nucleus RNA-seq identifies transcriptional heterogeneity in multinucleated skeletal myofibers

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.14.041400

N/A

0DataRank · unranked

31 citations

Casey O. Swoboda, Chengyi Sun, Kashish Chetal, Xiaoting Chen, Matthew T. Weirauch +3 more

Topoisomerase 1 inhibition therapy protects against SARS-CoV-2-induced inflammation and death in animal models

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.01.404483

N/A

0DataRank · unranked

8 citations

Bobo Wing-Yee Mok, Laura Campisi, Tristan X. Jordan, Soner Yildiz, Sreeja Parameswaran +46 more

Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endodermal gene regulatory network

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.19.956565

N/A

0DataRank · unranked

5 citations

Praneet Chaturvedi, Scott A. Rankin, Margaret B. Fish, Marcin Wlizla, Kitt Paraiso +7 more

Genome-wide discovery of SLE genetic risk variant allelic enhancer activity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.20.906701

N/A

0DataRank · unranked

4 citations

Xiaoting Chen, Carmy Forney, Omer Donmez, Daniel Miller, Sreeja Parameswaran +11 more

Meta-analysis of 208,370 East Asians identifies 113 genomic loci and yields new non-immune cell relevant biological insights for systemic lupus erythematosus

medRxiv(2020)10.1101/2020.08.22.20178939

N/A

0DataRank · unranked

1 citations

Kwangwoo Kim, Hiroyuki Suetsugu, So‐Young Bang, Leilei Wen, Masaru Koido +81 more

Epstein-Barr virus nuclear antigen 2 (EBNA2) extensively rewires the human chromatin landscape at autoimmune risk loci

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.15.043612

N/A

0DataRank · unranked

0 citations

Sreeja Parameswaran, Omer Donmez, Daniel Miller, Carmy Forney, Michael Lape +11 more

Enhancers with cooperative Notch binding sites are more resistant to regulation by the Hairless co-repressor

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.12.199422

N/A

0DataRank · unranked

0 citations

Anna Pyo, Natanel Eafergan, Brittany Cain, Lisa M. Gutzwiller, Ofri Axelrod +7 more

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0DataRank · unranked

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Mucosal Immunology(2021)10.1038/s41385-021-00416-4

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BMC Biology(2021)10.1186/s12915-021-00975-9

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52 citations

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0DataRank · unranked

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Nature Communications(2021)10.1038/s41467-020-20765-1

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0DataRank · unranked

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N/A

0DataRank · unranked

0 citations

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N/A

0DataRank · unranked

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