Ciro Ramírez-Suástegui

Immunology and MicrobiologyBiochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

17.0Author DataRank

Indexed papers

9in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 9 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

An integrated cell atlas of the lung in health and disease

Nature Medicine(2023)10.1038/s41591-023-02327-2

Top 4%

5.0DataRank

Top 4%781 citations

Ciro Ramírez-Suástegui, Tessa E. Gillett, Luke Zappia, Elo Madissoon, Nikolay S. Markov +87 more

Papers

Driven by 36 papers — median percentile 29. Top paper: “An integrated cell atlas of the lung in health and disease”.

An integrated cell atlas of the lung in health and disease

Nature Medicine(2023)10.1038/s41591-023-02327-2

Top 4%

5.0DataRank

Top 4%781 citations

Ciro Ramírez-Suástegui, Tessa E. Gillett, Luke Zappia, Elo Madissoon, Nikolay S. Markov +87 more

Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen

Nature Communications(2019)10.1038/s41467-019-09799-2

Top 4%

5.0DataRank

Top 4%368 citations

Dennis Wang, Mike J. Mason, Bence Szalai, Krishna C. Bulusu, Yuanfang Guan +426 more

PDX-MI: Minimal Information for Patient-Derived Tumor Xenograft Models

Cancer Research(2017)10.1158/0008-5472.can-17-0582

Top 6%

4.0DataRank

Top 6%130 citations

Nathalie Conte, Giorgio Inghirami, Mark A. Murakami, Sebastian Brabetz, Zhiping Gu +57 more

An integrated cell atlas of the human lung in health and disease

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.10.483747

Top 8%

2.8DataRank

Top 8%97 citations

Daniel Strobl, Luke Zappia, Nikolay S. Markov, Laure-Emmanuelle Zaragosi, Marie-Jeanne Arguel +77 more

Primary cilia and SHH signaling impairments in human and mouse models of Parkinson’s disease

Nature Communications(2022)10.1038/s41467-022-32229-9

N/A

1.7DataRank · unranked

69 citations

Malte D. Luecken, Dietrich Trümbach, Sina Hembach, Kristina M. Niedermeier, Nicole Wenck +19 more

Considerations for building and using integrated single-cell atlases

Nature Methods(2024)10.1038/s41592-024-02532-y

N/A

1.0DataRank · unranked

52 citations

Avi Srivastava, Vladimir A. Shitov, Graham Heimberg, Maiia Schulman, Amanda J. Oliver +10 more

Best practices for single-cell analysis across modalities

Nature Reviews Genetics(2023)10.1038/s41576-023-00586-w

N/A

1.0DataRank · unranked

1013 citations

Anna Christina Schaar, Christopher Lance, Anastasia Litinetskaya, Felix Drost, Luke Zappia +34 more

Imbalance of Regulatory and Cytotoxic SARS-CoV-2-Reactive CD4+ T Cells in COVID-19

Cell(2020)10.1016/j.cell.2020.10.001

N/A

0.957DataRank · unranked

588 citations

Ciro Ramírez-Suástegui, Vicente Fajardo, Serena Chee, Anthony Kusnadi, Hayley Simon +10 more

Defining and benchmarking open problems in single-cell analysis

Nature Biotechnology(2025)10.1038/s41587-025-02694-w

N/A

0.937DataRank · unranked

29 citations

Scott Gigante, Daniel B. Burkhardt, Robrecht Cannoodt, Nikolay S. Markov, Luke Zappia +48 more

Feature selection methods affect the performance of scRNA-seq data integration and querying

Nature Methods(2025)10.1038/s41592-025-02624-3

N/A

0.560DataRank · unranked

18 citations

Sabrina Richter, Ciro Ramírez-Suástegui, Raphael Kfuri-Rubens, Larsen Vornholz, Weixu Wang +5 more

An integrated cell atlas of the human lung in health and disease

Research Square(2022)10.21203/rs.3.rs-1438584/v1

Top 71%

0.127DataRank

Top 71%1 citations

Avi Srivastava, Daniel Strobl, Luke Zappia, Elo Madissoon, Nikolay S. Markov +80 more

Source Data files for: Primary cilia and SHH signaling impairments in human and mouse models of Parkinson's disease

Zenodo (CERN European Organization for Nuclear Research)(2022)10.5281/zenodo.6677636

Top 78%

0.104DataRank

Top 78%1 citations

Malte D. Luecken, Dietrich Trümbach, Sina Hembach, Kristina M. Niedermeier, Nicole Wenck +19 more

CD4 + follicular helper-like T cells are key players in anti-tumor immunity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.08.898346

N/A

0DataRank · unranked

13 citations

AP Ganesan, Bharat Panwar, Simon Eschweiler, Christopher J. Hanley, Ariel Madrigal +18 more

Severely ill COVID-19 patients display augmented functional properties in SARS-CoV-2-reactive CD8 + T cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.09.194027

N/A

0DataRank · unranked

10 citations

Ciro Ramírez-Suástegui, Vicente Fajardo, Serena Chee, Benjamin J. Meckiff, Hayley Simon +6 more

Severely ill patients with COVID-19 display impaired exhaustion features in SARS-CoV-2–reactive CD8 + T cells

Science Immunology(2021)10.1126/sciimmunol.abe4782

N/A

0DataRank · unranked

251 citations

Ciro Ramírez-Suástegui, Vicente Fajardo, Serena Chee, Benjamin J. Meckiff, Hayley Simon +6 more

Intratumoral follicular regulatory T cells curtail anti-PD-1 treatment efficacy

Nature Immunology(2021)10.1038/s41590-021-00958-6

N/A

0DataRank · unranked

112 citations

James Clarke, Ciro Ramírez-Suástegui, Bharat Panwar, Ariel Madrigal, Serena Chee +12 more

Transcriptomes and metabolism define mouse and human MAIT cell heterogeneity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.20.473182

N/A

0DataRank · unranked

7 citations

Gabriel Ascui, Thomas Riffelmacher, Ashu Chawla, Ciro Ramírez-Suástegui, Viankail Cedillo Castelan +19 more

Single-cell eQTL analysis of activated T cell subsets reveals activation and cell type–dependent effects of disease-risk variants

Science Immunology(2022)10.1126/sciimmunol.abm2508

N/A

0DataRank · unranked

104 citations

Cristian González-Colín, Vicente Fajardo, Job Rocha, Ariel Madrigal, Ciro Ramírez-Suástegui +9 more

Intermittent PI3Kδ inhibition sustains anti-tumour immunity and curbs irAEs

Nature(2022)10.1038/s41586-022-04685-2

N/A

0DataRank · unranked

92 citations

Ciro Ramírez-Suástegui, Yingcong Li, Emma V. King, Lindsey Chudley, Jaya Thomas +37 more

Tumor-infiltrating NK cell subsets associated with the magnitude of T cell response in human lung cancer

Research Square(2022)10.21203/rs.3.rs-1294352/v1

N/A

0DataRank · unranked

0 citations

Ciro Ramírez-Suástegui, James Clarke, Bharat Panwar, Oliver Wood, Serena Chee +7 more

Transcriptomes and metabolism define mouse and human MAIT cell populations

Science Immunology(2023)10.1126/sciimmunol.abn8531

N/A

0DataRank · unranked

48 citations

Gabriel Ascui, Thomas Riffelmacher, Ashu Chawla, Ciro Ramírez-Suástegui, Viankail Cedillo Castelan +20 more

Cytotoxic CD4+ tissue-resident memory T cells are associated with asthma severity

Med(2023)10.1016/j.medj.2023.09.003

N/A

0DataRank · unranked

39 citations

Ciro Ramírez-Suástegui, Heena Mistry, Francisco Emmanuel Castañeda-Castro, Mohammad A. Kyyaly, Hayley Simon +10 more

JAML immunotherapy targets recently activated tumor-infiltrating CD8+ T cells

Cell Reports(2023)10.1016/j.celrep.2023.112040

N/A

0DataRank · unranked

17 citations

Alice Wang, Ciro Ramírez-Suástegui, Adrian von Witzleben, Yingcong Li, Serena Chee +8 more

Stem-like T cells are associated with the pathogenesis of ulcerative colitis in humans

Nature Immunology(2024)10.1038/s41590-024-01860-7

N/A

0DataRank · unranked

34 citations

Ciro Ramírez-Suástegui, Richard Harris, Francisco Emmanuel Castañeda-Castro, Gabriel Ascui, Tamara Pérez-Jeldres +10 more

Intra-tumoral T cells in pediatric brain tumors display clonal expansion and effector properties

Nature Cancer(2024)10.1038/s43018-023-00706-9

N/A

0DataRank · unranked

16 citations

Kevin E. Meza Landeros, Ciro Ramírez-Suástegui, Benjamin Joachim Schmiedel, Edwin Woo, Serena Chee +14 more

Data from PDX-MI: Minimal Information for Patient-Derived Tumor Xenograft Models

(2023)10.1158/0008-5472.c.6510291.v1

Top 100%

0DataRank

Top 100%0 citations

Nathalie Conte, Giorgio Inghirami, Mark A. Murakami, Sebastian Brabetz, Zhiping Gu +59 more

Source Data files for: Primary cilia and SHH signaling impairments in human and mouse models of Parkinson's disease

Zenodo (CERN European Organization for Nuclear Research)(2022)10.5281/zenodo.6677637

Top 100%

0DataRank

Top 100%0 citations

Malte D. Luecken, Dietrich Trümbach, Sina Hembach, Kristina M. Niedermeier, Nicole Wenck +19 more

S1 from PDX-MI: Minimal Information for Patient-Derived Tumor Xenograft Models

Figshare(2024)10.1158/0008-5472.26366795.v1

N/A

0DataRank · unranked

0 citations

Nathalie Conte, Giorgio Inghirami, Mark A. Murakami, Sebastian Brabetz, Zhiping Gu +57 more

S1 from PDX-MI: Minimal Information for Patient-Derived Tumor Xenograft Models

(2024)10.1158/0008-5472.26366795

N/A

0DataRank · unranked

0 citations

Nathalie Conte, Giorgio Inghirami, Mark A. Murakami, Sebastian Brabetz, Zhiping Gu +58 more

S1 from PDX-MI: Minimal Information for Patient-Derived Tumor Xenograft Models

(2023)10.1158/0008-5472.22419099

N/A

0DataRank · unranked

0 citations

Nathalie Conte, Giorgio Inghirami, Mark A. Murakami, Sebastian Brabetz, Zhiping Gu +57 more

S1 from PDX-MI: Minimal Information for Patient-Derived Tumor Xenograft Models

Figshare(2023)10.1158/0008-5472.22419099.v1

N/A

0DataRank · unranked

0 citations

Nathalie Conte, Giorgio Inghirami, Mark A. Murakami, Sebastian Brabetz, Zhiping Gu +58 more

Data from PDX-MI: Minimal Information for Patient-Derived Tumor Xenograft Models

(2024)10.1158/0008-5472.c.6510291

Top 100%

0DataRank

Top 100%0 citations

Nathalie Conte, Giorgio Inghirami, Mark A. Murakami, Sebastian Brabetz, Zhiping Gu +58 more

Supplementary Video S1 from PDX-MI: Minimal Information for Patient-Derived Tumor Xenograft Models

(2024)10.1158/0008-5472.26366789

N/A

0DataRank · unranked

0 citations

Nathalie Conte, Giorgio Inghirami, Mark A. Murakami, Sebastian Brabetz, Zhiping Gu +57 more

S1 from PDX-MI: Minimal Information for Patient-Derived Tumor Xenograft Models

Figshare(2024)10.1158/0008-5472.26326774.v1

N/A

0DataRank · unranked

0 citations

Nathalie Conte, Giorgio Inghirami, Mark A. Murakami, Sebastian Brabetz, Zhiping Gu +57 more

Supplementary Video S1 from PDX-MI: Minimal Information for Patient-Derived Tumor Xenograft Models

Figshare(2024)10.1158/0008-5472.26326771.v1

N/A

0DataRank · unranked

0 citations

Nathalie Conte, Giorgio Inghirami, Mark A. Murakami, Sebastian Brabetz, Zhiping Gu +58 more

Single-cell transcriptomic analysis of allergen-specific T cells in allergy and asthma

Science Immunology(2020)10.1126/sciimmunol.aba6087

N/A

0DataRank · unranked

211 citations

Ciro Ramírez-Suástegui, Benjamin Joachim Schmiedel, Shu Liang, Bjoern Peters, Alessandro Sette +2 more

Ciro Ramírez-Suástegui

Indexed papers

Top data-sharing exemplar

Papers