John J. Tanner

Materials ScienceBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 29 papers. Top paper: “Structure and function of a flavin-dependent S-monooxygenase from garlic (Allium sativum)”.

Structure and function of a flavin-dependent S-monooxygenase from garlic (Allium sativum)

Journal of Biological Chemistry(2020)10.1074/jbc.ra120.014484

N/A

1.1DataRank · unranked

24 citations

A.C. Campbell, Jonathan P. Schuermann, Nazneen Sultana, Han G. Nam, Sophie Leblanc +3 more

In crystallo screening for proline analog inhibitors of the proline cycle enzyme PYCR1

Journal of Biological Chemistry(2020)10.1074/jbc.ra120.016106

N/A

1.1DataRank · unranked

35 citations

Alexandra Bogner, Anke Vandekeere, Gabriela S. Tam, Sagar M. Patel, Donald Becker +3 more

Impaired folate binding of serine hydroxymethyltransferase 8 from soybean underlies resistance to the soybean cyst nematode

Journal of Biological Chemistry(2020)10.1074/jbc.ra119.012256

N/A

0.908DataRank · unranked

23 citations

Pramod Kaitheri Kandoth, John J. Tanner, Melissa G. Mitchum, Lesa J. Beamer, David A. Korasick

Trapping conformational states of a flavin-dependent N-monooxygenase in crystallo reveals protein and flavin dynamics

Journal of Biological Chemistry(2020)10.1074/jbc.ra120.014750

N/A

0.637DataRank · unranked

18 citations

Kyle M. Stiers, Julia S. Martín del Campo, Ritcha Mehra‐Chaudhary, Pablo Sobrado, John J. Tanner +1 more

Structural analysis of prolines and hydroxyprolines binding to the l-glutamate-γ-semialdehyde dehydrogenase active site of bifunctional proline utilization A

Archives of Biochemistry and Biophysics(2020)10.1016/j.abb.2020.108727

N/A

0.434DataRank · unranked

17 citations

Alexandra Bogner, Yizi Mao, Donald Becker, John J. Tanner, A.C. Campbell

Therapeutic targeting of HYPDH/PRODH2 with N-propargylglycine offers a Hyperoxaluria treatment opportunity

Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease(2023)10.1016/j.bbadis.2023.166848

N/A

0.312DataRank · unranked

7 citations

Ada Tadeo, Gary K. Scott, Fadzai Teramayi, John J. Tanner, Birgit Schilling +3 more

Biochemical, structural, and computational analyses of two new clinically identified missense mutations of ALDH7A1

Chemico-Biological Interactions(2024)10.1016/j.cbi.2024.110993

N/A

0.104DataRank · unranked

1 citations

David P. Buckley, Alessandra Palpacelli, Ida Cursio, Elisabetta Cesaroni, Jianlin Cheng +2 more

Evidence for Proline Catabolic Enzymes in the Metabolism of Thiazolidine Carboxylates

Biochemistry(2021)10.1021/acs.biochem.1c00625

N/A

0DataRank · unranked

3 citations

Javier Seravalli, Thomas G. Smith, Martha Morton, John J. Tanner, Donald Becker +1 more

Probing the function of a ligand-modulated dynamic tunnel in bifunctional proline utilization A (PutA)

Archives of Biochemistry and Biophysics(2021)10.1016/j.abb.2021.109025

N/A

0DataRank · unranked

4 citations

Shelbi Christgen, Insaf Ahmed Qureshi, Donald Becker, John J. Tanner, David A. Korasick

Structure-affinity relationships of reversible proline analog inhibitors targeting proline dehydrogenase

Organic & Biomolecular Chemistry(2022)10.1039/d1ob02328d

N/A

0DataRank · unranked

14 citations

John J. Tanner, Alexandra Bogner

Kinetic and Structural Characterization of a Flavin-Dependent Putrescine N-Hydroxylase from Acinetobacter baumannii

Biochemistry(2022)10.1021/acs.biochem.2c00493

N/A

0DataRank · unranked

9 citations

Alexandra Bogner, John J. Tanner, Pablo Sobrado, Noah S. Lyons

Expression and kinetic characterization of PYCR3

Archives of Biochemistry and Biophysics(2022)10.1016/j.abb.2022.109468

N/A

0DataRank · unranked

6 citations

John J. Tanner, Kaylen Meeks

Structure-based engineering of minimal proline dehydrogenase domains for inhibitor discovery

Protein Engineering Design and Selection(2022)10.1093/protein/gzac016

N/A

0DataRank · unranked

4 citations

Juan Ji, John J. Tanner, Alexandra Bogner

Conformational Preferences of Pyridone Adenine Dinucleotides from Molecular Dynamics Simulations

International Journal of Molecular Sciences(2022)10.3390/ijms231911866

N/A

0DataRank · unranked

4 citations

Marie E. Migaud, John J. Tanner, David P. Buckley

Functional Impact of a Cancer-Related Variant in Human Δ1-Pyrroline-5-Carboxylate Reductase 1

ACS Omega(2023)10.1021/acsomega.2c07788

N/A

0DataRank · unranked

2 citations

Kaylen Meeks, Lu Zhang, Javier Seravalli, John J. Tanner, Donald Becker +1 more

Crystal structure of domain of unknown function 507 (DUF507) reveals a new protein fold

Scientific Reports(2023)10.1038/s41598-023-40558-y

N/A

0DataRank · unranked

0 citations

Jianlin Cheng, John J. Tanner, Cole McKay

Novel Fragment Inhibitors of PYCR1 from Docking-Guided X-ray Crystallography

Journal of Chemical Information and Modeling(2024)10.1021/acs.jcim.3c01879

N/A

0DataRank · unranked

12 citations

Juan Ji, Mykola Protopopov, Olga O. Tarkhanova, Yurii S. Moroz, John J. Tanner +1 more

Screening a knowledge‐based library of low molecular weight compounds against the proline biosynthetic enzyme 1‐pyrroline‐5‐carboxylate 1 (PYCR1)

Protein Science(2024)10.1002/pro.5072

N/A

0DataRank · unranked

8 citations

Alexandra Bogner, John J. Tanner, Kaylen Meeks

Noncovalent Inhibition and Covalent Inactivation of Proline Dehydrogenase by Analogs of N-Propargylglycine

Biochemistry(2024)10.1021/acs.biochem.4c00429

N/A

0DataRank · unranked

7 citations

Juan Ji, Alexandra Bogner, Gary K. Scott, Sagar M. Patel, Javier Seravalli +4 more

Crystallographic Fragment Screening of a Bifunctional Proline Catabolic Enzyme Reveals New Inhibitor Templates for Proline Dehydrogenase and L-Glutamate-γ-semialdehyde Dehydrogenase

Molecules(2024)10.3390/molecules29225408

N/A

0DataRank · unranked

3 citations

Alexandra Bogner, Jay C. Nix, John J. Tanner, Kaylen Meeks

Biochemical, structural, and cellular characterization of S-but-3-yn-2-ylglycine as a mechanism-based covalent inactivator of the flavoenzyme proline dehydrogenase

Archives of Biochemistry and Biophysics(2025)10.1016/j.abb.2025.110319

N/A

0DataRank · unranked

6 citations

Juan Ji, Gary K. Scott, A.C. Campbell, Jay C. Nix, Ada Tadeo +4 more

Bioinformatics Methods for Mass Spectrometry-Based Proteomics Data Analysis

International Journal of Molecular Sciences(2020)10.3390/ijms21082873

N/A

0DataRank · unranked

280 citations

Jie Hou, John J. Tanner, Jianlin Cheng, Chen Chen

Visualization of covalent intermediates and conformational states of proline utilization A by X-ray crystallography and molecular dynamics simulations

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.110532

N/A

0DataRank · unranked

0 citations

Donald Becker, John J. Tanner, David P. Buckley

DeepCryoPicker: fully automated deep neural network for single protein particle picking in cryo-EM

BMC Bioinformatics(2020)10.1186/s12859-020-03809-7

N/A

0DataRank · unranked

71 citations

Anes Ouadou, Highsmith Max, Ye Duan, John J. Tanner, Jianlin Cheng +1 more

Impact of missense mutations in the ALDH7A1 gene on enzyme structure and catalytic function

Biochimie(2020)10.1016/j.biochi.2020.09.016

N/A

0DataRank · unranked

13 citations

John J. Tanner, David A. Korasick

Inhibition, crystal structures, and in-solution oligomeric structure of aldehyde dehydrogenase 9A1

Archives of Biochemistry and Biophysics(2020)10.1016/j.abb.2020.108477

N/A

0DataRank · unranked

24 citations

David A. Korasick, Insaf Ahmed Qureshi, A.C. Campbell, Kent S. Gates, John J. Tanner +1 more

Structural basis for the stereospecific inhibition of the dual proline/hydroxyproline catabolic enzyme ALDH4A1 by trans‐4‐hydroxy‐L‐proline

Protein Science(2021)10.1002/pro.4131

N/A

0DataRank · unranked

13 citations

Kyle M. Stiers, Cole M. McKay, Donald Becker, John J. Tanner, Alexandra Bogner

Disease variants of human Δ1-pyrroline-5-carboxylate reductase 2 (PYCR2)

Archives of Biochemistry and Biophysics(2021)10.1016/j.abb.2021.108852

N/A

0DataRank · unranked

15 citations

Javier Seravalli, Xinwen Liang, John J. Tanner, Donald Becker, Sagar M. Patel

N-Propargylglycine: a unique suicide inhibitor of proline dehydrogenase with anticancer activity and brain-enhancing mitohormesis properties

Amino Acids(2021)10.1007/s00726-021-03012-9

N/A

0DataRank · unranked

14 citations

Sophia Mahoney, Madeleine Scott, Ashley Loureiro, Alejandro Lopez‐Ramirez, John J. Tanner +3 more