🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Jeremy P. Gygi

AbbVie (United States)

ORCID: 0000-0001-8567-7472

Also affiliated with Yale University

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
2.3Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Immune Signatures data resource, a compendium of systems vaccinology datasets

Scientific Data(2022)10.1038/s41597-022-01714-7
Top 23%
0.863DataRank
Top 23%29 citations

Helen E. R. Miller, Evan Henrich, Bram Gerritsen, Matthew P. Mulè, Slim Fourati +34 more

Papers

Driven by 15 papers — median percentile 61. Top paper: “Integrated longitudinal multiomics study identifies immune programs associated with acute COVID-19 severity and mortality”.

Integrated longitudinal multiomics study identifies immune programs associated with acute COVID-19 severity and mortality

Journal of Clinical Investigation(2024)10.1172/jci176640
N/A
0.910DataRank · unranked
32 citations

Cole Maguire, Ravi K. Patel, Pramod Shinde, Anna Konstorum, Casey P. Shannon +38 more

The Immune Signatures data resource, a compendium of systems vaccinology datasets

Scientific Data(2022)10.1038/s41597-022-01714-7
Top 23%
0.863DataRank
Top 23%29 citations

Helen E. R. Miller, Evan Henrich, Bram Gerritsen, Matthew P. Mulè, Slim Fourati +34 more

Multi-omic longitudinal study reveals immune correlates of clinical course among hospitalized COVID-19 patients

Cell Reports Medicine(2023)10.1016/j.xcrm.2023.101079
Top 26%
0.782DataRank
Top 26%53 citations

Slim Fourati, Naresh Doni Jayavelu, Ravi K. Patel, Cole Maguire, Ana C. Chang +95 more

Features of acute COVID-19 associated with post-acute sequelae of SARS-CoV-2 phenotypes: results from the IMPACC study

Nature Communications(2024)10.1038/s41467-023-44090-5
N/A
0.617DataRank · unranked
60 citations

Naresh Doni Jayavelu, Shanshan Liu, Esther Melamed, Carly E. Milliren, Jingjing Qi +95 more

IgM N-glycosylation correlates with COVID-19 severity and rate of complement deposition

Nature Communications(2024)10.1038/s41467-023-44211-0
N/A
0.505DataRank · unranked
28 citations

Kyra Woloszczuk, Jintong Hou, Jennifer Connors, Gina Cusimano, Matthew R. Bell +94 more

A multiomics recovery factor predicts long COVID in the IMPACC study

Journal of Clinical Investigation(2025)10.1172/jci193698
N/A
0.355DataRank · unranked
7 citations

Jessica Maciuch, Jeremy P. Gygi, John F. Moore, Annmarie Hoch, Caitlin Syphurs +51 more

The Immune Signatures Data Resource: A compendium of systems vaccinology datasets

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.05.465336
Top 52%
0.330DataRank
Top 52%8 citations

Helen E. R. Miller, Evan Henrich, Bram Gerritsen, Matthew P. Mulè, Slim Fourati +19 more

A multi-omics systems vaccinology resource to develop and test computational models of immunity

Cell Reports Methods(2024)10.1016/j.crmeth.2024.100731
Top 57%
0.280DataRank
Top 57%5 citations

Ferran Soldevila, Joaquin Reyna, Minori Aoki, Mikkel Mylius Rasmussen, Lisa Willemsen +18 more

Integrated longitudinal multi-omics study identifies immune programs associated with COVID-19 severity and mortality in 1152 hospitalized participants

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.03.565292
N/A
0.269DataRank · unranked
5 citations

Cole Maguire, Ravi K. Patel, Pramod Shinde, Anna Konstorum, Casey P. Shannon +40 more

A supervised Bayesian factor model for the identification of multi-omics signatures

Bioinformatics(2024)10.1093/bioinformatics/btae202
N/A
0DataRank · unranked
10 citations

Anna Konstorum, Shrikant Pawar, E Aron, Steven H. Kleinstein, Leying Guan +1 more

Putting computational models of immunity to the test - an invited challenge to predict B. pertussis vaccination outcomes

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.04.611290
N/A
0DataRank · unranked
1 citations

Lisa Willemsen, Michael C. Anderson, Minori Aoki, Saonli Basu, Julie G. Burel +54 more

Putting computational models of immunity to the test—An invited challenge to predict B.pertussis vaccination responses

PLoS Computational Biology(2025)10.1371/journal.pcbi.1012927
N/A
0DataRank · unranked
1 citations

Lisa Willemsen, Michael C. Anderson, Minori Aoki, Saonli Basu, Julie G. Burel +54 more

A systems vaccinology resource to develop and test computational models of immunity

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.28.555193
N/A
0DataRank · unranked
0 citations

Ferran Soldevila, Joaquin Reyna, Minori Aoki, Mikkel Mylius Rasmussen, Lisa Willemsen +18 more

Machine learning models predict long COVID outcomes based on baseline clinical and immunologic factors

medRxiv(2025)10.1101/2025.02.12.25322164
N/A
0DataRank · unranked
3 citations

Hady Samaha, S. Wimalasena, Annmarie Hoch, Jeremy P. Gygi, Gisela Gabernet +45 more

A supervised Bayesian factor model for the identification of multi-omics signatures

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.25.525545
N/A
0DataRank · unranked
1 citations

Anna Konstorum, Shrikant Pawar, E Aron, Steven H. Kleinstein, Leying Guan +1 more