Scott J. Hultgren

Also affiliated with Washington University in St. Louis

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 6%percentile

0.232Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Complete Genome Sequence of the Uropathogenic Methicillin-Resistant Staphylococcus aureus Strain MRSA-1369

Microbiology Resource Announcements(2022)10.1128/mra.00981-22

Top 62%

0.232DataRank

Top 62%3 citations

Taylor M. Nye, Mari Bonde, Michael G. Caparon, Fredrik Almqvist, Scott J. Hultgren +2 more

Papers

Driven by 32 papers — median percentile 38. Top paper: “Uropathogenic Escherichia coli infection-induced epithelial trained immunity impacts urinary tract disease outcome”.

Uropathogenic Escherichia coli infection-induced epithelial trained immunity impacts urinary tract disease outcome

Nature Microbiology(2023)10.1038/s41564-023-01346-6

N/A

1.7DataRank · unranked

64 citations

Jessica K. Harrison, Benjamin Olson, Hyung Joo Lee, Valerie P. O’Brien, Xiaoyun Xing +14 more

Limited effects of long-term daily cranberry consumption on the gut microbiome in a placebo-controlled study of women with recurrent urinary tract infections

BMC Microbiology(2021)10.1186/s12866-021-02106-4

N/A

1.2DataRank · unranked

31 citations

Wen‐Chi Chou, Abigail L. Manson, Henry L. Schreiber, Bruce J. Walker, Christopher A. Desjardins +10 more

Longitudinal multi-omics analyses link gut microbiome dysbiosis with recurrent urinary tract infections in women

Nature Microbiology(2022)10.1038/s41564-022-01107-x

N/A

0.783DataRank · unranked

184 citations

Henry L. Schreiber, Timothy J. Straub, Lucas R. van Dijk, Ryan A. Bronson, Benjamin Olson +20 more

StrainGE: a toolkit to track and characterize low-abundance strains in complex microbial communities

Genome biology(2022)10.1186/s13059-022-02630-0

N/A

0.710DataRank · unranked

113 citations

Bruce J. Walker, Timothy J. Straub, Colin J. Worby, Alexandra Grote, Henry L. Schreiber +7 more

Distinct Escherichia coli transcriptional profiles in the guts of recurrent UTI sufferers revealed by pangenome hybrid selection

Nature Communications(2024)10.1038/s41467-024-53829-7

N/A

0.414DataRank · unranked

9 citations

Timothy J. Straub, Colin J. Worby, Hayden C. Metsky, Andreas Gnirke, Ryan A. Bronson +13 more

A prospective randomized clinical trial to assess antibiotic pocket irrigation on tissue expander breast reconstruction

Microbiology Spectrum(2023)10.1128/spectrum.01430-23

N/A

0.373DataRank · unranked

11 citations

Blake Hanson, T B Hunter, Shelby R. Simar, Jesus M. Duran Ramirez, Chloe L. P. Obernuefemann +6 more

StrainGE: A toolkit to track and characterize low-abundance strains in complex microbial communities

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.14.431013

N/A

0.360DataRank · unranked

10 citations

Bruce J. Walker, Timothy J. Straub, Colin J. Worby, Alexandra Grote, Henry L. Schreiber +7 more

Structural basis for adhesin secretion by the outer-membrane usher in type 1 pili

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2410594121

N/A

0.292DataRank · unranked

6 citations

Maxwell I. Zimmerman, Brock Summers, Jerome S. Pinkner, Karen Dodson, Scott J. Hultgren +2 more

Gut-bladder axis syndrome associated with recurrent UTIs in humans

medRxiv(2021)10.1101/2021.11.15.21266268

N/A

0.241DataRank · unranked

4 citations

Henry L. Schreiber, Timothy J. Straub, Lucas R. van Dijk, Ryan A. Bronson, Benjamin Olson +19 more

Complete Genome Sequence of the Uropathogenic Methicillin-Resistant Staphylococcus aureus Strain MRSA-1369

Microbiology Resource Announcements(2022)10.1128/mra.00981-22

Top 62%

0.232DataRank

Top 62%3 citations

Taylor M. Nye, Mari Bonde, Michael G. Caparon, Fredrik Almqvist, Scott J. Hultgren +2 more

Distinct Escherichia coli transcriptional profiles in the guts of recurrent UTI sufferers revealed by pangenome hybrid selection

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.29.582780

N/A

0.119DataRank · unranked

1 citations

Timothy J. Straub, Colin J. Worby, Hayden C. Metsky, Andreas Gnirke, Ryan A. Bronson +13 more

Fibrinolytic-deficiencies predispose hosts to septicemia from a catheter-associated UTI.

Research Square(2023)10.21203/rs.3.rs-3263501/v1

N/A

0.104DataRank · unranked

1 citations

Jonathan Molina, Kurt N. Kohler, Christopher Gager, Marissa J. Andersen, Ellsa Wongso +13 more

Secretory leukocyte protease inhibitor protects against severe urinary tract infection in mice

mBio(2024)10.1128/mbio.02554-23

N/A

0DataRank · unranked

11 citations

Michael A. Lint, Dayne Voelker, Nicole M. Gilbert, Christopher P. Tomera, Jesús Santiago-Borges +6 more

Discovery of Orally Bioavailable FmlH Lectin Antagonists as Treatment for Urinary Tract Infections

Journal of Medicinal Chemistry(2024)10.1021/acs.jmedchem.3c02128

N/A

0DataRank · unranked

10 citations

Kevin O. Tamadonfar, Jerome S. Pinkner, Denise A. Sanick, Scott J. Hultgren, James W. Janetka +1 more

Dihydrothiazolo ring-fused 2-pyridone antimicrobial compounds treat Streptococcus pyogenes skin and soft tissue infection

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.02.573960

N/A

0DataRank · unranked

0 citations

Chloe L. P. Obernuefemann, Pardeep Singh, Jerome S. Pinkner, Wei Xu, Taylor M. Nye +5 more

Longitudinal profiling of low-abundance strains in microbiomes with ChronoStrain

Nature Microbiology(2025)10.1038/s41564-025-01983-z

N/A

0DataRank · unranked

5 citations

Colin J. Worby, Sawal Acharya, Lucas R. van Dijk, Daniel Alfonsetti, Zackary Gromko +8 more

Uropathogenic Escherichia coli niche occupancy determines the effects of mucosal vaccine against FimH

Cell Reports(2025)10.1016/j.celrep.2025.116077

N/A

0DataRank · unranked

3 citations

Anne Rosén, Ariel Hernandez-Leyva, Christopher P. Tomera, Michael A. Lint, Alexandra E. Paharik +8 more

The Unique Efg1 Fungal Virulence Regulon in the Catheterized Bladder Environment

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.06.686417

N/A

0DataRank · unranked

3 citations

Nicholas C Gervais, Kurt N. Kohler, Chloe L. P. Obernuefemann, Ilse D. Jacobsen, Rebecca S. Shapiro +5 more

De Novo Design of Miniprotein Inhibitors of Bacterial Adhesins

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.18.670751

N/A

0DataRank · unranked

1 citations

Tuscan R. Thompson, Edward D. B. Lopatto, Pearl Magala, Patrick Erickson, Andrew C. Hunt +24 more

Adaptation of Arginine Synthesis among Uropathogenic Branches of the Escherichia coli Phylogeny Reveals Adjustment to the Urinary Tract Habitat

mBio(2020)10.1128/mbio.02318-20

N/A

0DataRank · unranked

20 citations

Karen Dodson, Vasilios Kalas, Swaine L. Chen, Scott J. Hultgren, Michael E. Hibbing

Metabolic cross-talk promotes persistence of Enterococcus in a model of polymicrobial catheter-associated urinary tract infection

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.19.689321

N/A

0DataRank · unranked

0 citations

Jerome S. Pinkner, Chloe L. P. Obernuefemann, Kent Kleinschmidt, Denise A. Sanick, Suzanne M. Hickerson +5 more

A host receptor enables type 1 pilus-mediated pathogenesis of Escherichia coli pyelonephritis

PLoS Pathogens(2021)10.1371/journal.ppat.1009314

N/A

0DataRank · unranked

43 citations

Michael R. McAllaster, Arthur S. Kim, Ľubomíra Tóthová, Patrick D. Olson, Jerome S. Pinkner +8 more

Bacterial infection drives trained immunity through epigenetic remodeling of epithelial stem cells

Research Square(2021)10.21203/rs.3.rs-842556/v1

N/A

0DataRank · unranked

0 citations

Seongmi K. Russell, Hyung Joo Lee, Benjamin Olson, Jonathan Livny, Valerie P. O’Brien +9 more

Establishing the role of the gut microbiota in susceptibility to recurrent urinary tract infections

Journal of Clinical Investigation(2022)10.1172/jci158497

N/A

0DataRank · unranked

54 citations

Benjamin Olson, Karen Dodson, Ashlee M. Earl, Scott J. Hultgren, Colin J. Worby

Ring-fused 2-pyridones effective against multidrug-resistant Gram-positive pathogens and synergistic with standard-of-care antibiotics

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2210912119

N/A

0DataRank · unranked

16 citations

Hasan Tükenmez, Pardeep Singh, Ana L. Flores‐Mireles, Chloe L. P. Obernuefemann, Jerome S. Pinkner +9 more

Defining the roles of pyruvate oxidation, TCA cycle, and mannitol metabolism in methicillin resistance Staphylococcus aureus catheter-associated urinary tract infection

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.28.514332

N/A

0DataRank · unranked

0 citations

Sarah Guedry, Chloe L. P. Obernuefemann, Scott J. Hultgren, Jennifer N. Walker, Ritwij Kulkarni +1 more

Defining the Roles of Pyruvate Oxidation, TCA Cycle, and Mannitol Metabolism in Methicillin-Resistant Staphylococcus aureus Catheter-Associated Urinary Tract Infection

Microbiology Spectrum(2023)10.1128/spectrum.05365-22

N/A

0DataRank · unranked

15 citations

Sarah Guedry, Chloe L. P. Obernuefemann, Scott J. Hultgren, Jennifer N. Walker, Ritwij Kulkarni +1 more

Secretory Leukocyte Protease Inhibitor Protects Against Severe Urinary Tract Infection in Mice

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.10.561753

N/A

0DataRank · unranked

1 citations

Michael A. Lint, Dayne Voelker, Nicole M. Gilbert, Christopher P. Tomera, Jesús Santiago-Borges +6 more

Strain tracking with uncertainty quantification

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.25.525531

N/A

0DataRank · unranked

0 citations

Colin J. Worby, Sawal Acharya, Lucas R. van Dijk, Daniel Alfonsetti, Zackary Gromko +8 more

Microbial co-occurrences on catheters from long-term catheterized patients

Nature Communications(2024)10.1038/s41467-023-44095-0

N/A

0DataRank · unranked

73 citations

Zongsen Zou, Chloe L. P. Obernuefemann, Jerome S. Pinkner, Erin Lowry, Kent Kleinschmidt +10 more

Fibrinolytic-deficiencies predispose hosts to septicemia from a catheter-associated UTI

Nature Communications(2024)10.1038/s41467-024-46974-6

N/A

0DataRank · unranked

21 citations

K. Köhler, Christopher Gager, Marissa J. Andersen, Ellsa Wongso, Elizabeth R. Lucas +13 more

Conformational ensembles in Klebsiella pneumoniae FimH impact uropathogenesis

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2409655121

N/A

0DataRank · unranked

19 citations

Jerome S. Pinkner, Denise A. Sanick, Robert Potter, Lily X. Liu, Jesús Bazán Villicaña +9 more

Scott J. Hultgren

Indexed papers

Top data-sharing exemplar

Papers