Qi Liu

Also affiliated with New York Blood Center, Army Medical University, Affiliated Hospital of Qingdao University, Southwest Hospital

Biochemistry, Genetics and Molecular BiologyMedicineImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 23 papers. Top paper: “Identification and multimodal characterization of a specialized epithelial cell type associated with Crohn’s disease”.

Identification and multimodal characterization of a specialized epithelial cell type associated with Crohn’s disease

Nature Communications(2024)10.1038/s41467-024-51580-7

N/A

1.1DataRank · unranked

49 citations

Alan J. Simmons, Caroline V. Hawkins, Sophie Chiron, Marisol Ramirez‐Solano, Naila Tasneem +34 more

Archetype tasks link intratumoral heterogeneity to plasticity and cancer hallmarks in small cell lung cancer

Cell Systems(2022)10.1016/j.cels.2022.07.006

N/A

0.614DataRank · unranked

59 citations

Geena V. Ildefonso, Caitlin O. McAtee, Patricia Midori Murobushi Ozawa, Abbie S. Ireland, Philip E. Stauffer +21 more

aKNNO: single-cell and spatial transcriptomics clustering with an optimized adaptive k-nearest neighbor graph

Genome biology(2024)10.1186/s13059-024-03339-y

N/A

0.532DataRank · unranked

11 citations

Yu Shyr, Qi Liu, Jia Li

Expanded profiling of WD repeat domain 5 inhibitors reveals actionable strategies for the treatment of hematologic malignancies

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2408889121

N/A

0.385DataRank · unranked

12 citations

Brianna N. Smith, Jing Wang, Kevin B. Teuscher, Brian C. Grieb, Gregory C. Howard +12 more

Coordinated changes in stromal and hematopoietic cells that define the perinatal to juvenile transition in the mouse thymus

Cell Reports(2025)10.1016/j.celrep.2025.116677

N/A

0.165DataRank · unranked

2 citations

Colin E. Moore, Aparna Calindi, Seungwoo Kang, Bryan R. Helm, Jayashree Srinivasan +13 more

stImage: a versatile framework for optimizing spatial transcriptomic analysis through customizable deep histology and location informed integration

Briefings in Bioinformatics(2025)10.1093/bib/bbaf429

N/A

0.165DataRank · unranked

2 citations

Haichun Yang, Ruining Deng, Yuankai Huo, Qi Liu, Yu Shyr +2 more

A distribution-free and analytic method for power and sample size calculation in single-cell differential expression

Bioinformatics(2024)10.1093/bioinformatics/btae540

N/A

0.104DataRank · unranked

1 citations

Qi Liu, Yu Shyr, Chih–Yuan Hsu

Inhibition of autocrine HGF maturation overcomes cetuximab resistance in colorectal cancer

Cellular and Molecular Life Sciences(2024)10.1007/s00018-023-05071-5

N/A

0DataRank · unranked

15 citations

Ramona Graves‐Deal, Zheng Cao, Galina Bogatcheva, Marisol Ramirez, Sarah Harmych +13 more

scKWARN: Kernel-weighted-average robust normalization for single-cell RNA-seq data

Bioinformatics(2024)10.1093/bioinformatics/btae008

N/A

0DataRank · unranked

2 citations

Chih‐Han Chang, Qi Liu, Yu Shyr, Chih–Yuan Hsu

EVPsort: An Atlas of Small ncRNA Profiling and Sorting in Extracellular Vesicles and Particles

Journal of Molecular Biology(2024)10.1016/j.jmb.2024.168571

N/A

0DataRank · unranked

2 citations

Jing Wang, Robert J. Coffey, James G. Patton, Alissa M. Weaver, Yu Shyr +2 more

Mitotic gene regulation by the N-MYC-WDR5-PDPK1 nexus

BMC Genomics(2024)10.1186/s12864-024-10282-6

N/A

0DataRank · unranked

1 citations

Alexandria G. Williams, James R. Evans, Jing Wang, Alissa D. Guarnaccia, Andrea C. Florian +5 more

FindAdapt: A python package for fast and accurate adapter detection in small RNA sequencing

PLoS Computational Biology(2024)10.1371/journal.pcbi.1011786

N/A

0DataRank · unranked

7 citations

Jing Wang, Yu Shyr, Qi Liu, Hua-Chang Chen

Data from A Large-Scale Meta-Analysis Reveals Positive Feedback between Macrophages and T Cells That Sensitizes Tumors to Immunotherapy

(2024)10.1158/0008-5472.c.7075693

N/A

0DataRank · unranked

0 citations

Qi Liu, Yu Shyr, Jing Yang

VICTOR: Validation and inspection of cell type annotation through optimal regression

Computational and Structural Biotechnology Journal(2024)10.1016/j.csbj.2024.08.028

N/A

0DataRank · unranked

0 citations

Chih–Yuan Hsu, Qi Liu, Yu Shyr, Chia-Jung Chang

eNRSA: a faster and more powerful approach for nascent transcriptome analysis

GigaScience(2025)10.1093/gigascience/giaf071

N/A

0DataRank · unranked

0 citations

Hua-Chang Chen, Scott W. Hiebert, Quanhu Sheng, William P. Tansey, Yu Shyr +2 more

Beyond Programmed Death-Ligand 1: B7-H6 Emerges as a Potential Immunotherapy Target in SCLC

Journal of Thoracic Oncology(2021)10.1016/j.jtho.2021.03.011

N/A

0DataRank · unranked

33 citations

Sarah M. Groves, Yun-Kai Zhang, Jia Li, Paula I. González-Ericsson, Shamilene Sivagnanam +14 more

Distinct and convergent effects of SF3B1 mutations in human breast cancer

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2505374122

N/A

0DataRank · unranked

0 citations

Christin I. Keeton, Irika R. Sinha, Jonathan P. Ling, Yu Wang, Lauren Ha +17 more

Panobinostat enhances olaparib efficacy by modifying expression of homologous recombination repair and immune transcripts in ovarian cancer

Neoplasia(2021)10.1016/j.neo.2021.12.002

N/A

0DataRank · unranked

29 citations

Vijayalaxmi Gupta, Qi Liu, Fiona E. Yull, Marta A. Crispens, Dineo Khabele +1 more

Structure-based discovery of potent WD repeat domain 5 inhibitors that demonstrate efficacy and safety in preclinical animal models

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2211297120

N/A

0DataRank · unranked

38 citations

Somenath Chowdhury, Kenneth M. Meyers, Jianhua Tian, Jiqing Sai, Mayme Van Meveren +15 more

Dysregulated ligand–receptor interactions from single-cell transcriptomics

Bioinformatics(2022)10.1093/bioinformatics/btac294

N/A

0DataRank · unranked

20 citations

Chih–Yuan Hsu, Jia Li, Yu Shyr, Qi Liu

Scalable and model-free detection of spatial patterns and colocalization

Genome Research(2022)10.1101/gr.276851.122

N/A

0DataRank · unranked

61 citations

Chih–Yuan Hsu, Yu Shyr, Qi Liu

A Large-Scale Meta-Analysis Reveals Positive Feedback between Macrophages and T Cells That Sensitizes Tumors to Immunotherapy

Cancer Research(2023)10.1158/0008-5472.can-23-2006

N/A

0DataRank · unranked

19 citations

Qi Liu, Yu Shyr, Jing Yang

Data from Telomere Content and Risk of Second Malignant Neoplasm in Survivors of Childhood Cancer: A Report from the Childhood Cancer Survivor Study

(2023)10.1158/1078-0432.c.6521438

N/A

0DataRank · unranked

0 citations

Qi Liu, Yutaka Yasui, M. Fatih Okcu, Joseph P. Neglia, Louise C. Strong +4 more