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Scalable and model-free detection of spatial patterns and colocalization

Genome Research(2022)10.1101/gr.276851.122Source: DataRank Database

Scalable and model-free detection of spatial patterns and colocalization is a research paper published in Genome Research (2022). On theSindex it has a DataRank of 0. It has been cited 61 times.

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Open Access61 citations

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datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (12 grants)OA: bronzeTopics (28)IDs (PubMed, PMC, OpenAlex)

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Context only (not used in score)

Findable (1/2)

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Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (3)

Chih–Yuan Hsu ORCID,Yu Shyr ORCID,Qi Liu ORCID

Live enrichment

PubMed:36223499 PMC:PMC9528978 OpenAlex:https://openalex.org/W4295028214

National Cancer Institute

Grant: U2C CA233291

National Cancer Institute

Grant: U54 CA217450

National Institutes of Health

Grant: P01 AI139449

Cancer Center Support

Grant: P30CA068485

NCI NIH HHS

Grant: P50 CA098131

NCI NIH HHS

Grant: U54 CA274367

NCI NIH HHS

Grant: P01 CA229123

NCI NIH HHS

Grant: P50 CA236733

National Institutes of Health

Grant: 3P30CA068485-23S2

Cancer Center Support Grant

National Institutes of Health

Grant: 1U2CCA233291-01

Integrative Single-Cell Atlas of Host and Microenvironment in Colorectal Neoplastic Transformation

National Institutes of Health

Grant: 5U54CA217450-04

Phenotype Heterogeneity and Dynamics in SCLC

National Institutes of Health

Grant: 5P01AI139449-02

Mechanisms controlling distinct growth and functional characteristics of the perinatal and adult thymus

bronzeLicense: http://creativecommons.org/licenses/by-nc/4.0/This article, published in Genome Research, is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/ (http://creativecommons.org/licenses/by-nc/4.0/) .

journalhttps://genome.cshlp.org/content/32/9/1736.full.pdf

publisherhttps://genome.cshlp.org/content/32/9/1736.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/gr.276851.122

journalhttps://doi.org/10.1101/gr.276851.122

repositoryhttps://pubmed.ncbi.nlm.nih.gov/36223499

Fields of Study

Single-cell and spatial transcriptomicsGene expression and cancer classificationGene Regulatory Network Analysis0301 basic medicine03 medical and health sciences0206 medical engineering02 engineering and technology

MeSH Terms

LigandsGene Expression ProfilingTranscriptome

Keywords

ColocalizationBiologyComputational biologyScalabilityProfiling (computer programming)Spatial analysisSpatial ecologyTranscriptomeData miningBioinformaticsComputer scienceGeneticsNeuroscienceGene expressionGeneGene Expression ProfilingMethodLigands