Antoine Chaillon

Medicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.4Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Tracing the transmission dynamics of HIV-1 CRF55_01B

Scientific Reports(2020)10.1038/s41598-020-61870-x

Top 15%

1.4DataRank

Top 15%28 citations

Haizhou Liu, Zhenzhen Lu, Antoine Chaillon, Davey M. Smith, Yi Li +2 more

Papers

Driven by 49 papers — median percentile 85. Top paper: “Tracing the transmission dynamics of HIV-1 CRF55_01B”.

Tracing the transmission dynamics of HIV-1 CRF55_01B

Scientific Reports(2020)10.1038/s41598-020-61870-x

Top 15%

1.4DataRank

Top 15%28 citations

Haizhou Liu, Zhenzhen Lu, Antoine Chaillon, Davey M. Smith, Yi Li +2 more

Lessons for Understanding Central Nervous System HIV Reservoirs from the Last Gift Program

Current HIV/AIDS Reports(2022)10.1007/s11904-022-00628-8

N/A

0.736DataRank · unranked

41 citations

Antoine Chaillon, Guochun Jiang, Scott Letendre, Yuyang Tang, Jeff Taylor +5 more

Gene expression and chromatin conformation of microglia in virally suppressed people with HIV

Life Science Alliance(2024)10.26508/lsa.202402736

N/A

0.660DataRank · unranked

25 citations

Sara Gianella, Zhengyu Ouyang, Addison J. Lana, Xiaoxu Yang, S O'Brien +10 more

Phylogenetic Analyses of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) B.1.1.7 Lineage Suggest a Single Origin Followed by Multiple Exportation Events Versus Convergent Evolution

Clinical Infectious Diseases(2021)10.1093/cid/ciab265

N/A

0.494DataRank · unranked

26 citations

Davey M. Smith, Antoine Chaillon

Case Series of Patients with Marburg Virus Disease, Equatorial Guinea, 2023

New England Journal of Medicine(2024)10.1056/nejmc2313181

N/A

0.396DataRank · unranked

13 citations

Candido Ondo Ondo Avomo, Ladislao Ekiri Ngomo Mikue, Domitila Ñadang Fuga Eyemam, Micaela Ayang Nguere, Ilda Elobe Mometolo +20 more

Neutralizing Antibody Responses After Severe Acute Respiratory Syndrome Coronavirus 2 BA.2 and BA.2.12.1 Infection Do Not Neutralize BA.4 and BA.5 and Can Be Blunted by Nirmatrelvir/Ritonavir Treatment

Open Forum Infectious Diseases(2023)10.1093/ofid/ofad154

N/A

0.312DataRank · unranked

7 citations

Alex E. Clark, Aaron F. Garretson, William Bray, Magali Porrachia, AsherLev T Santos +4 more

Can’t Work From Home: Pooled Nucleic Acid Testing of Laboratory Workers During the COVID-19 Pandemic

Open Forum Infectious Diseases(2021)10.1093/ofid/ofab129

N/A

0.292DataRank · unranked

6 citations

Brianna Scott, Laura Layman, Pramod P. Naranatt, Roy Heltsley, Caroline Ignacio +5 more

Viral and Immune Risk Factors of HIV Rebound After Interruption of Antiretroviral Therapy

The Journal of Infectious Diseases(2024)10.1093/infdis/jiae585

N/A

0.247DataRank · unranked

3 citations

Tingting Yu, Ran Wang, Caroline Ignacio, Merle Schanz, Roger D. Kouyos +11 more

Anatomical, subset, and HIV-dependent expression of viral sensors and restriction factors

Cell Reports(2025)10.1016/j.celrep.2024.115202

N/A

0.234DataRank · unranked

3 citations

Jason Neidleman, Xiaoyu Luo, Julie Frouard, Natalie Elphick, Kailin Yin +14 more

Impact of influenza and pneumococcal vaccines on HIV persistence and immune dynamics during suppressive antiretroviral therapy

AIDS(2024)10.1097/qad.0000000000003882

N/A

0.167DataRank · unranked

2 citations

Christy M. Anderson, Antoine Chaillon, Alan Wells, Magali Porrachia, Gemma Caballero +11 more

Sex Differences in Human Immunodeficiency Virus Persistence and Reservoir Size During Aging

Clinical Infectious Diseases(2021)10.1093/cid/ciab873

N/A

0DataRank · unranked

57 citations

Stephen A. Rawlings, Curtis Dobrowolski, Masato Nakazawa, Antoine Chaillon, Matthew C. Strain +10 more

Dispersal dynamics of SARS-CoV-2 lineages during the first epidemic wave in New York City

PLoS Pathogens(2021)10.1371/journal.ppat.1009571

N/A

0DataRank · unranked

45 citations

Samuel L. Hong, Bram Vrancken, Antoine Chaillon, Mandev S. Gill, Matthew T. Maurano +8 more

Modeling the population‐level impact of opioid agonist treatment on mortality among people accessing treatment between 2001 and 2020 in New South Wales, Australia

Addiction(2021)10.1111/add.15736

N/A

0DataRank · unranked

29 citations

Chrianna Bharat, Jack Stone, Nicola Jones, Louisa Degenhardt, Sarah Larney +6 more

Cost and cost-effectiveness of a real-world HCV treatment program among HIV-infected individuals in Myanmar

BMJ Global Health(2021)10.1136/bmjgh-2020-004181

N/A

0DataRank · unranked

8 citations

Antoine Chaillon, Kyi Pyar Soe, Derek C. Johnson, Jean-Marc Zosso, Andrea Incerti +13 more

Virologic and Immunologic Characterization of Coronavirus Disease 2019 Recrudescence After Nirmatrelvir/Ritonavir Treatment

Clinical Infectious Diseases(2022)10.1093/cid/ciac496

N/A

0DataRank · unranked

63 citations

Alex E. Clark, Antoine Chaillon, Aaron F. Garretson, William Bray, Magali Porrachia +4 more

SARS-CoV-2 Seroconversion in an Adult Horse with Direct Contact to a COVID-19 Individual

Viruses(2022)10.3390/v14051047

N/A

0DataRank · unranked

17 citations

Antoine Chaillon, Caroline Ignacio, Davey M. Smith, Samantha Barnum, Kaila Lawton +3 more

Landscape of Human Immunodeficiency Virus Neutralization Susceptibilities Across Tissue Reservoirs

Clinical Infectious Diseases(2022)10.1093/cid/ciac164

N/A

0DataRank · unranked

9 citations

Timothy E. Schlub, Wen‐Han Yu, Chen Sabrina Tan, Karl Stéfic, Sara Gianella +5 more

Cocirculation and replacement of SARS-CoV-2 variants in crowded settings and marginalized populations along the US-Mexico border

Salud Pública de México(2022)10.21149/13980

N/A

0DataRank · unranked

3 citations

Ietza Bojórquez, Jaime Sepúlveda, Alicia Vera, Gudelia Rangel, Britt Skaathun +6 more

Comparative Dynamics of Delta and Omicron SARS-CoV-2 Variants across and between California and Mexico

Viruses(2022)10.3390/v14071494

N/A

0DataRank · unranked

5 citations

Davey M. Smith, Celia Boukadida, Antoine Chaillon, Sanjay R. Mehta

Virologic and Immunologic Characterization of COVID-19 Recrudescence after Nirmatrelvir/Ritonavir Treatment

Research Square(2022)10.21203/rs.3.rs-1662783/v1

N/A

0DataRank · unranked

41 citations

Alex E. Clark, Antoine Chaillon, Aaron F. Garretson, William Bray, Magali Porrachi +3 more

Brain microglia serve as a persistent HIV reservoir despite durable antiretroviral therapy

Journal of Clinical Investigation(2023)10.1172/jci167417

N/A

0DataRank · unranked

147 citations

Antoine Chaillon, Sara Gianella, Lilly Wong, Dajiang Li, Theresa L. Simermeyer +23 more

Predictors of COVID-19 vaccine uptake among people who inject drugs

Vaccine(2023)10.1016/j.vaccine.2023.01.042

N/A

0DataRank · unranked

29 citations

Daniela Abramovitz, Carlos F. Vera, Irina Artamónova, Thomas L. Patterson, Davey M. Smith +3 more

Brief Report: Comparative Analysis of Pre-existing HIV Drug Resistance Mutations in Proviral DNA Using Next-Generation Sequencing and Routine HIV RNA Genotyping

JAIDS Journal of Acquired Immune Deficiency Syndromes(2023)10.1097/qai.0000000000003195

N/A

0DataRank · unranked

5 citations

Michelle L. D’Antoni, Rima Acosta, Sara Gianella, Susan J. Little, Antoine Chaillon +1 more

A Community-Driven Framework to Prioritize the Use of Donated Human Biological Materials in the Context of HIV Cure-Related Research at the End of Life

Pathogens and Immunity(2023)10.20411/pai.v8i1.583

N/A

0DataRank · unranked

3 citations

Thomas J. Villa, Jeff Taylor, Andy Kaytes, David J. Moore, Susan J. Little +4 more

Identification of system-level features in HIV migration within a host

PLoS ONE(2023)10.1371/journal.pone.0291367

N/A

0DataRank · unranked

3 citations

Victor De Gruttola, Sara Gianella, Gemma Caballero, Magali Porrachia, Caroline Ignacio +4 more

HIV-1 Remission after Allogeneic Hematopoietic-Cell Transplantation

New England Journal of Medicine(2024)10.1056/nejmc2312556

N/A

0DataRank · unranked

39 citations

Ahmed Aribi, Angelo A. Cardoso, Sara Gianella, Ketevan Gendzekhadze, Shirley Li +20 more

HIV-1 transmission dynamics among people who inject drugs on the US/Mexico border during the COVID-19 pandemic: a prospective cohort study

The Lancet Regional Health - Americas(2024)10.1016/j.lana.2024.100751

N/A

0DataRank · unranked

9 citations

Steffanie A. Strathdee, Cho‐Hee Shrader, Carrie L. Nacht, Annick Bórquez, Irina Artamónova +8 more

Cannabis Use and Cannabidiol Modulate HIV-Induced Alterations in TREM2 Expression: Implications for Age-Related Neuropathogenesis

Viruses(2024)10.3390/v16101509

N/A

0DataRank · unranked

8 citations

Jacqueline R. Kulbe, Mary Ford, Anna Elizabeth Laird, K.A. Walter, Michael Mante +12 more

Brief Report: Genital Microbiome, Inflammation, and Tenofovir Levels in Transgender Men and Cisgender Women Taking Oral PrEP

JAIDS Journal of Acquired Immune Deficiency Syndromes(2024)10.1097/qai.0000000000003521

N/A

0DataRank · unranked

3 citations

Megha S. Srivatsa, Sara Gianella, Mackenzie L. Cottrell, Kyra Forsyth, Magali Porrachia +7 more

Cytokine trajectory over time in men and women with HIV on long-term ART

AIDS(2024)10.1097/qad.0000000000004033

N/A

0DataRank · unranked

1 citations

Alan Wells, Victor DeGruttola, Miranda L. Lynch, Xinlian Zhang, Wendy Fitzgerald +8 more

Quality of Life in People With HIV at the End of Life: Preliminary Results From the Last Gift Observational Cohort Study

JAIDS Journal of Acquired Immune Deficiency Syndromes(2024)10.1097/qai.0000000000003536

N/A

0DataRank · unranked

2 citations

Gordon Honerkamp Smith, Anish Arora, Adam J. Wells, Stephanie Solso, Cheryl Dullano +11 more

Phylodynamics for Human Immunodeficiency Virus Prevention: A Miami-Dade County Case Study

The Journal of Infectious Diseases(2024)10.1093/infdis/jiae605

N/A

0DataRank · unranked

0 citations

Alan Wells, Colby Cohen, Angela Campbell, Michelle Truong, Susan J. Little +2 more

HIV Integration into the PTEN Gene and Its Tumor Microenvironment Implications for Lung Cancer

Current Oncology(2025)10.3390/curroncol32070389

N/A

0DataRank · unranked

4 citations

Elizabeth F. Rowland, Sara Gianella, Sandip Pravin Patel, Stephanie Solso, Cheryl Dullano +8 more

Quantifying the impact of a large‐scale opioid agonist treatment program on suicide prevention in New South Wales, Australia: A data‐modeling study

Addiction(2025)10.1111/add.70018

N/A

0DataRank · unranked

4 citations

Antoine Chaillon, Natasha K. Martin, Matthew Hickman, N. R. Jones, Michael Farrell +4 more

HIV Reservoir Dynamics and Bacteriome Composition Along the Gut Axis

The Journal of Infectious Diseases(2025)10.1093/infdis/jiaf546

N/A

0DataRank · unranked

4 citations

Davey M. Smith, Noah C. Gaitan, M.M. Awad, Magali Porrachia, Annie Wells +6 more

Microglial reactivity and nodule formation are associated with Synaptodendritic damage in the brains of people with HIV ‐1

Brain Pathology(2025)10.1111/bpa.70064

N/A

0DataRank · unranked

1 citations

Lauren A. Ignatz, Sathish Selvam, Marc C. E. Wagner, Sara Gianella, Antoine Chaillon +8 more

Insights Gained from the Immune Response and Screening of Healthcare Workers After COVID-19 Vaccination

COVID(2025)10.3390/covid5080129

N/A

0DataRank · unranked

0 citations

Jennifer Huynh, Bryan V. Pham, Magali Porrachia, Caroline Ignacio, Sasi Mudumba +4 more

Cannabis use is associated with alterations in NLRP3 inflammasome related gene expression in monocyte-derived macrophages from people living with HIV

Frontiers in Immunology(2025)10.3389/fimmu.2025.1634203

N/A

0DataRank · unranked

0 citations

Bryant Avalos, Mary Ford, Anna Elizabeth Laird, Ali Boustani, Matthew Spencer +9 more

HIV persists throughout deep tissues with repopulation from multiple anatomical sources

Journal of Clinical Investigation(2020)10.1172/jci134815

N/A

0DataRank · unranked

243 citations

Sara Gianella, Simon Dellicour, Stephen A. Rawlings, Timothy E. Schlub, Michelli F. Oliveira +5 more

Spatial biology discovery approaches to dissect in situ modification of site-specific tissue HIV reservoirs 2542

The Journal of Immunology(2025)10.1093/jimmun/vkaf283.448

N/A

0DataRank · unranked

0 citations

Preeti Moar, Vanessa Gomez-Moreno, Davey M Smith, Antoine Chaillon, Sara Gianella +2 more

Comparative Circulation Dynamics of the Five Main HIV Types in China

Journal of Virology(2020)10.1128/jvi.00683-20

N/A

0DataRank · unranked

62 citations

Bin Zhao, Xingguang Li, Xiaoxu Han, Haizhou Liu, Jin Zhao +8 more

No Evidence of SARS-CoV-2 Seminal Shedding Despite SARS-CoV-2 Persistence in the Upper Respiratory Tract

Open Forum Infectious Diseases(2020)10.1093/ofid/ofaa325

N/A

0DataRank · unranked

40 citations

Caroline Ignacio, Magali Porrachia, Pinyi Du, Davey M. Smith, Antoine Chaillon +1 more

Subclinical Cytomegalovirus and Epstein-Barr Virus Shedding Is Associated with Increasing HIV DNA Molecular Diversity in Peripheral Blood during Suppressive Antiretroviral Therapy

Journal of Virology(2020)10.1128/jvi.00927-20

N/A

0DataRank · unranked

17 citations

Masato Nakazawa, Stephen A. Rawlings, Genevieve Curtin, Gemma Caballero, Brianna Scott +3 more

High Prevalence of HIV-1 Drug Resistance and Dynamics of Transmission Among High-Risk Populations in Port-au-Prince, Haiti

JAIDS Journal of Acquired Immune Deficiency Syndromes(2020)10.1097/qai.0000000000002475

N/A

0DataRank · unranked

4 citations

Jean Wysler Domerçant, Caroline Ignacio, Sara Gianella, Guethina Galbaud, Maureen M. Leonard +3 more

Cost-effectiveness of Antenatal Rescreening Among Pregnant Women for Hepatitis C in the United States

Clinical Infectious Diseases(2020)10.1093/cid/ciaa362

N/A

0DataRank · unranked

14 citations

Adriane Wynn, Tatyana Kushner, Nancy Reau, Natasha K. Martin, Antoine Chaillon

Dynamics and Dispersal of Local Human Immunodeficiency Virus Epidemics Within San Diego and Across the San Diego–Tijuana Border

Clinical Infectious Diseases(2020)10.1093/cid/ciaa1588

N/A

0DataRank · unranked

28 citations

Sanjay R. Mehta, Santiago Ávila‐Ríos, Claudia García‐Morales, Daniela Tapia‐Trejo, Gustavo Reyes‐Terán +10 more

HIV RNA Rebound in Seminal Plasma after Antiretroviral Treatment Interruption

Journal of Virology(2020)10.1128/jvi.00415-20

N/A

0DataRank · unranked

7 citations

Antoine Chaillon, Tae‐Wook Chun, Michael C. Sneller, Caroline Ignacio, Milenka Vargas-Meneses +7 more

What is required for achieving hepatitis C virus elimination in Singapore? A modeling study

Journal of Gastroenterology and Hepatology(2020)10.1111/jgh.15211

N/A

0DataRank · unranked

7 citations

Prem Harichander Thurairajah, John Hsiang, Natasha K. Martin, Antoine Chaillon

Optimizing Screening for HIV

Open Forum Infectious Diseases(2020)10.1093/ofid/ofaa024

N/A

0DataRank · unranked

4 citations

Martin Hoenigl, Lorri Freitas, Haruna S. Feldman, Winston Tilghman, Lawrence Wang +4 more

Antoine Chaillon

Indexed papers

Top data-sharing exemplar

Papers