🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

David Botstein

San Francisco VA Medical Center

ORCID: 0000-0001-9499-4883

Also affiliated with Enzo Life Sciences (United States), Calico Life Sciences

Biochemistry, Genetics and Molecular BiologyEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
3.4Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A genome‐scale yeast library with inducible expression of individual genes

Molecular Systems Biology(2021)10.15252/msb.202110207
Top 11%
1.9DataRank
Top 11%74 citations

Griffin Kim, Zhijian Li, Helena Friesen, Gina Turco, Rebecca Y. Wang +10 more

Papers

Driven by 15 papers — median percentile 80. Top paper: “The Role of Heat Shock Transcription Factor 1 in the Genome-wide Regulation of the Mammalian Heat Shock Response”.

The Role of Heat Shock Transcription Factor 1 in the Genome-wide Regulation of the Mammalian Heat Shock Response

Molecular Biology of the Cell(2004)10.1091/mbc.e03-10-0738
N/A
17.8DataRank · unranked
288 citations

John I. Murray, Sara J. Hartman, David Botstein, Richard M. Myers, Nathan D. Trinklein

A genome‐scale yeast library with inducible expression of individual genes

Molecular Systems Biology(2021)10.15252/msb.202110207
Top 11%
1.9DataRank
Top 11%74 citations

Griffin Kim, Zhijian Li, Helena Friesen, Gina Turco, Rebecca Y. Wang +10 more

Gene Ontology: tool for the unification of biology

Nature Genetics(2000)10.1038/75556
N/A
1.6DataRank · unranked
44989 citations

Catherine A. Ball, Judith A. Blake, David Botstein, Heather Butler, J. Michael Cherry +15 more

Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling

Nature(2000)10.1038/35000501
N/A
1.4DataRank · unranked
9923 citations

Michael B. Eisen, R. Eric Davis, Chi Ma, Izidore S. Lossos, Andreas Rosenwald +32 more

Missing value estimation methods for DNA microarrays

Bioinformatics(2001)10.1093/bioinformatics/17.6.520
N/A
1.3DataRank · unranked
4216 citations

Michael Cantor, Gavin Sherlock, Pat Brown, Trevor Hastie, Robert Tibshirani +3 more

Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

Nature Genetics(2003)10.1038/ng1165
N/A
1.1DataRank · unranked
1701 citations

Michael Shapira, Prisca Liberali, David Botstein, Daphne Koller, Nir Friedman +3 more

Gene expression profiling identifies clinically relevant subtypes of prostate cancer

Proceedings of the National Academy of Sciences(2004)10.1073/pnas.0304146101
N/A
1.1DataRank · unranked
1307 citations

Chunde Li, Julian P.T. Higgins, Matt van de Rijn, Eric Bair, Kelli D Montgomery +15 more

Global analysis of the yeast knockout phenome

Science Advances(2023)10.1126/sciadv.adg5702
Top 20%
0.998DataRank
Top 20%32 citations

Christie Chang, Rebecca Y. Wang, Griffin Kim, Emily H. Stoops, Brianna Hughes +12 more

A Bayesian framework for combining heterogeneous data sources for gene function prediction (inSaccharomyces cerevisiae)

Proceedings of the National Academy of Sciences(2003)10.1073/pnas.0832373100
N/A
0.942DataRank · unranked
533 citations

Kara Dolinski, Art B. Owen, Russ B. Altman, David Botstein, Olga G. Troyanskaya

Variation in Gene Expression Patterns in Human Gastric Cancers

Molecular Biology of the Cell(2003)10.1091/mbc.e02-12-0833
N/A
0.865DataRank · unranked
318 citations

Suet Y. Leung, Siu T. Yuen, Kent-Man Chu, Jiafu Ji, Rui Li +11 more

A genome-scale yeast library with inducible expression of individual genes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.30.424776
Top 38%
0.512DataRank
Top 38%9 citations

Griffin Kim, Zhijian Li, Helena Friesen, Gina Turco, Rebecca Y. Wang +10 more

Aip3p/Bud6p, a yeast actin-interacting protein that is involved in morphogenesis and the selection of bipolar budding sites.

UNC Libraries(2020)10.17615/98qf-6c51
N/A
0DataRank · unranked
0 citations

David Botstein, Joseph E. Zahner, John R. Pringle, Jon W. Mulholland, David C. Amberg

Expression of Cytokeratins 17 and 5 Identifies a Group of Breast Carcinomas with Poor Clinical Outcome

UNC Libraries(2020)10.17615/9gqk-0s87
N/A
0DataRank · unranked
0 citations

Charles M. Perou, Phillippe Haas, Holger Dieterich, Markus Zuber, Rob Tibshirani +11 more

RERG Is a Novel ras -related, Estrogen-regulated and Growth-inhibitory Gene in Breast Cancer

UNC Libraries(2021)10.17615/44zm-xv81
N/A
0DataRank · unranked
0 citations

David Botstein, Robert S. Seitz, Chia Ling Gau, Douglas Andres, Fuyuhiko Tamanoi +8 more

Identification of Genes Periodically Expressed in the Human Cell Cycle and Their Expression in Tumors

UNC Libraries(2020)10.17615/awrf-kz95
N/A
0DataRank · unranked
2 citations

John C. Matese, Karen E. Alexander, Myra M. Hurt, John I. Murray, Alok J. Saldanha +6 more