🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Joshua Gould

Broad Institute

ORCID: 0000-0001-9581-5461

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

5.6Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors

Nature Medicine(2020)10.1038/s41591-020-0844-1

Top 4%

5.6DataRank

Top 4%819 citations

Caroline B. M. Porter, Orr Ashenberg, Julia Waldman, Eugene Drokhlyansky, Isaac Wakiro +45 more

Papers

Driven by 14 papers — median percentile 96. Top paper: “COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets”.

COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets

Nature(2021)10.1038/s41586-021-03570-8

N/A

10.7DataRank · unranked

879 citations

Carly G.K. Ziegler, Graham Heimberg, Rachelly Normand, Yiming Yang, Åsa Segerstolpe +95 more

Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics

Nature Medicine(2021)10.1038/s41591-020-01227-z

N/A

8.2DataRank · unranked

378 citations

Malte D. Luecken, Gökcen Eraslan, Lisa Sikkema, Avinash Waghray, Graham Heimberg +95 more

A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors

Nature Medicine(2020)10.1038/s41591-020-0844-1

Top 4%

5.6DataRank

Top 4%819 citations

Caroline B. M. Porter, Orr Ashenberg, Julia Waldman, Eugene Drokhlyansky, Isaac Wakiro +45 more

A Distinct Transcriptional Program in Human CAR T Cells Bearing the 4-1BB Signaling Domain Revealed by scRNA-Seq

Molecular Therapy(2020)10.1016/j.ymthe.2020.07.023

N/A

3.3DataRank · unranked

111 citations

Rebecca C. Larson, Nemanja Despot Marjanovic, Kirk Gosik, Ana P. Castano, Selena J. Lorrey +17 more

A single-cell and single-nucleus RNA-seq toolbox for fresh and frozen human tumors

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/761429

N/A

2.5DataRank · unranked

68 citations

Orr Ashenberg, Julia Waldman, Eugene Drokhlyansky, Isaac Wakiro, Indresh Singh +44 more

High-density spatial transcriptomics arrays for in situ tissue profiling

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/563338

N/A

1.9DataRank · unranked

25 citations

Johanna Klughammer, Linnea Stenbeck, Fredrik Salmén, Tarmo Äijö, Richard Bonneau +9 more

Multiplexed, image-based pooled screens in primary cells and tissues with PerturbView

Nature Biotechnology(2024)10.1038/s41587-024-02391-0

N/A

1.8DataRank · unranked

54 citations

Ana M. Meireles, Reuben Moncada, Yushu Chen, Ping Wu, Joshua Gould +38 more

Single-nucleus and spatial transcriptomics of archival pancreatic cancer reveals multi-compartment reprogramming after neoadjuvant treatment

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.25.267336

N/A

1.6DataRank · unranked

35 citations

Karthik A. Jagadeesh, Jimmy A. Guo, Hannah I. Hoffman, Payman Yadollahpour, Rahul Mohan +46 more

High-definition spatial transcriptomics for in situ tissue profiling

Nature Methods(2019)10.1038/s41592-019-0548-y

N/A

1.1DataRank · unranked

1196 citations

Gökçen Eraslan, Fredrik Salmén, Johanna Klughammer, Linnea Stenbeck, Denis Schapiro +13 more

Cumulus provides cloud-based data analysis for large-scale single-cell and single-nucleus RNA-seq

Nature Methods(2020)10.1038/s41592-020-0905-x

N/A

0.837DataRank · unranked

264 citations

Joshua Gould, Yiming Yang, Siranush Sarkizova, Marcin Tabaka, Orr Ashenberg +9 more

Highly multiplexed, image-based pooled screens in primary cells and tissues with PerturbView

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.26.573143

N/A

0.641DataRank · unranked

11 citations

Ana M. Meireles, Reuben Moncada, Yushu Chen, Ping Wu, Joshua Gould +31 more

scSVA: an interactive tool for big data visualization and exploration in single-cell omics

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/512582

N/A

0.434DataRank · unranked

17 citations

Joshua Gould, Prisca Liberali, Marcin Tabaka

Structure and transcription of integrated HPV DNA in vulvar carcinomas

npj Genomic Medicine(2024)10.1038/s41525-024-00418-8

N/A

0DataRank · unranked

8 citations

Lauren Turker, Yoke‐Chen Chang, Joshua Gould, Bryan Harmon, Elaine C. Maggi +11 more

Author Correction: Multiplexed, image-based pooled screens in primary cells and tissues with PerturbView

Nature Biotechnology(2025)10.1038/s41587-025-02602-2

N/A

0DataRank · unranked

0 citations

Ana M. Meireles, Reuben Moncada, Yushu Chen, Ping Wu, Joshua Gould +38 more