Yanxiao Zhang

Also affiliated with Institute of Basic Medical Sciences of the Chinese Academy of Medical Sciences, Zhejiang University of Technology

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

51.5Author DataRank

Indexed papers

13in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 13 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Integrative analysis of 111 reference human epigenomes

Nature(2015)10.1038/nature14248

Top 1%

10.0DataRank

Top 1%7189 citations

Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen +93 more

Papers

Driven by 48 papers — median percentile 95. Top paper: “Correction: Corrigendum: Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases”.

Correction: Corrigendum: Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases

Scientific Reports(2016)10.1038/srep19384

N/A

10.4DataRank · unranked

722 citations

Tao Huang, Francesca Petralia, Quan Long, Bin Zhang, Carmen Argmann +129 more

Integrative analysis of 111 reference human epigenomes

Nature(2015)10.1038/nature14248

Top 1%

10.0DataRank

Top 1%7189 citations

Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen +93 more

Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes

Genome Research(2007)10.1101/gr.6593807

N/A

9.1DataRank · unranked

196 citations

Yanxiao Zhang, Leopold Parts, Julius Brennecke, Emily Hodges, Gregory J. Hannon +2 more

Systematic discovery and characterization of regulatory motifs in ENCODE TF binding experiments

Nucleic Acids Research(2013)10.1093/nar/gkt1249

Top 2%

8.9DataRank

Top 2%525 citations

Sharon L. R. Kardia, Yanxiao Zhang

A high-resolution map of human evolutionary constraint using 29 mammals

Nature(2011)10.1038/nature10530

Top 2%

7.6DataRank

Top 2%1227 citations

Genome Institute at Washington University, Manuel Garber, Or Zuk, Alireza Heravi-Moussavi, Wouter Meuleman +49 more

A cis-regulatory map of the Drosophila genome

Nature(2011)10.1038/nature09990

Top 3%

7.0DataRank

Top 3%543 citations

Christopher D. Brown, Christopher Aaron Bristow, Steven W. Miller, Ulrich Wagner, Yanxiao Zhang +40 more

Expanded encyclopaedias of DNA elements in the human and mouse genomes

Nature(2020)10.1038/s41586-020-2493-4

Top 3%

6.4DataRank

Top 3%2615 citations

Federico Abascal, Reyes Acosta, Nicholas J. Addleman, Jessika Adrian, Veena Afzal +501 more

Reliable prediction of regulator targets using 12 Drosophila genomes

Genome Research(2007)10.1101/gr.7090407

N/A

6.4DataRank · unranked

162 citations

Alexander Stark, Sushmita Roy, Sharon L. R. Kardia, Yanxiao Zhang

An atlas of dynamic chromatin landscapes in mouse fetal development

Nature(2020)10.1038/s41586-020-2093-3

Top 5%

4.8DataRank

Top 5%441 citations

Iros Barozzi, Yuan Zhao, Yanxiao Zhang, Hui Huang, Ah Young Lee +38 more

Loss of CHD1 Promotes Heterogeneous Mechanisms of Resistance to AR-Targeted Therapy via Chromatin Dysregulation

Cancer Cell(2020)10.1016/j.ccell.2020.03.001

N/A

3.8DataRank · unranked

166 citations

Chuanli Zhou, Xiaoling Li, Spencer Barnes, Su Deng, Elizabeth Hoover +27 more

Analysis of variation at transcription factor binding sites in Drosophila and humans

Genome Biology(2012)10.1186/gb-2012-13-9-r49

Top 6%

3.8DataRank

Top 6%104 citations

Junaid Akhtar, Yanxiao Zhang, Kathryn Beal, Charles Girardot, Gautier Koscielny +6 more

Topologically associating domain boundaries are required for normal genome function

Communications Biology(2023)10.1038/s42003-023-04819-w

N/A

2.5DataRank · unranked

156 citations

Iros Barozzi, Yiwen Zhu, Rong Hu, Yanxiao Zhang, Bin Li +24 more

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

Science(2010)10.1126/science.1198374

Top 9%

2.4DataRank

Top 9%1089 citations

Sushmita Roy, Jason Ernst, Peter V. Kharchenko, Yanxiao Zhang, Richard S. Sandstrom +172 more

Genome-wide association and multi-omic analyses reveal ACTN2 as a gene linked to heart failure

Nature Communications(2020)10.1038/s41467-020-14843-7

N/A

2.3DataRank · unranked

86 citations

Emmanouil Tampakakis, Yanxiao Zhang, Wei Wang, Adam Auton, Michelle Agee +48 more

Evidence of reduced recombination rate in human regulatory domains

Genome Biology(2017)10.1186/s13059-017-1308-x

N/A

2.1DataRank · unranked

61 citations

Abhishek Sarkar, Yanxiao Zhang, Jason Ernst, Sharon L. R. Kardia, Yaping Liu

Conservation of small RNA pathways in platypus

Genome Research(2008)10.1101/gr.073056.107

N/A

1.9DataRank · unranked

49 citations

Yanxiao Zhang, Ravi Sachidanandam, Carly Smith, Emily Hodges, Zhenyu Xuan +5 more

Erratum: Genome analysis of the platypus reveals unique signatures of evolution

Nature(2008)10.1038/nature07253

N/A

1.6DataRank · unranked

35 citations

LaDeana W. Hillier, Jennifer A. Marshall Graves, Kerstin Lindblad‐Toh, Elaine A. Ostrander, Frank Grützner +115 more

Diverse patterns of genomic targeting by transcriptional regulators in Drosophila melanogaster

Genome Research(2014)10.1101/gr.168807.113

N/A

1.6DataRank · unranked

34 citations

Christopher A. Bristow, Robert K. Arthur, Yanxiao Zhang, Anshul Kundaje, Nicolas Nègre +18 more

Histone modifications at human enhancers reflect global cell-type-specific gene expression

Nature(2009)10.1038/nature07829

N/A

1.2DataRank · unranked

2569 citations

Gary C. Hon, R. David Hawkins, Yanxiao Zhang, Alexander Stark, Lindsey F. Harp +18 more

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

Genome Research(2012)10.1101/gr.136184.111

N/A

1.2DataRank · unranked

2212 citations

Georgi K. Marinov, Anshul Kundaje, Yanxiao Zhang, Florencia Pauli, Serafim Batzoglou +46 more

Comprehensive analysis of single cell ATAC-seq data with SnapATAC

Nature Communications(2021)10.1038/s41467-021-21583-9

N/A

0.930DataRank · unranked

491 citations

Sebastian Preissl, Yang Li, Xiaomeng Hou, Jacinta D. Lucero, Xinxin Wang +11 more

Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation

Nature Neuroscience(2018)10.1038/s41593-018-0079-3

N/A

0.897DataRank · unranked

394 citations

Rongxin Fang, Hui Huang, Yuan Zhao, Ramya Raviram, David U. Gorkin +10 more

Systematic dissection of regulatory motifs in 2000 predicted human enhancers using a massively parallel reporter assay

Genome Research(2013)10.1101/gr.144899.112

N/A

0.885DataRank · unranked

363 citations

Jason Ernst, Alexandre Melnikov, Peter Rogov, Li Wang, Xiaolan Zhang +5 more

Effect of predicted protein-truncating genetic variants on the human transcriptome

Science(2015)10.1126/science.1261877

N/A

0.877DataRank · unranked

345 citations

Matti Pirinen, Donald F. Conrad, Monkol Lek, Emily K. Tsang, Konrad J. Karczewski +206 more

A Comprehensive Map of Insulator Elements for the Drosophila Genome

PLoS Genetics(2010)10.1371/journal.pgen.1000814

N/A

0.877DataRank · unranked

344 citations

Christopher D. Brown, Parantu K. Shah, Yanxiao Zhang, Carolyn A. Morrison, Philipp Kapranov +11 more

Joint profiling of histone modifications and transcriptome in single cells from mouse brain

Nature Methods(2021)10.1038/s41592-021-01060-3

N/A

0.865DataRank · unranked

318 citations

Yanxiao Zhang, Yang Eric Li, Jacinta D. Lucero, M. Margarita Behrens, Bing Ren +1 more

An Epigenetic Signature for Monoallelic Olfactory Receptor Expression

Cell(2011)10.1016/j.cell.2011.03.040

N/A

0.860DataRank · unranked

308 citations

Angela Yen, Bradley M. Colquitt, E. Josephine Clowney, Eirene Markenscoff-Papadimitriou, Zoe A. Evans +8 more

Joint profiling of DNA methylation and chromatin architecture in single cells

Nature Methods(2019)10.1038/s41592-019-0502-z

N/A

0.825DataRank · unranked

243 citations

Yaping Liu, Yanxiao Zhang, Naoki Kubo, Miao Yu, Rongxin Fang +3 more

Comparative analysis of regulatory information and circuits across distant species

Nature(2014)10.1038/nature13668

N/A

0.818DataRank · unranked

232 citations

Carlos L. Araya, Cathleen Brdlik, Philip Cayting, Chao Cheng, Yong Cheng +40 more

Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases

Scientific Reports(2015)10.1038/srep15145

N/A

0.811DataRank · unranked

222 citations

Tao Huang, Francesca Petralia, Quan Long, Bin Zhang, Carmen Argmann +128 more

A single Hox locus in Drosophila produces functional microRNAs from opposite DNA strands

Genes & Development(2008)10.1101/gad.1613108

N/A

0.809DataRank · unranked

219 citations

Natascha Bushati, Calvin H. Jan, Yanxiao Zhang, Emily Hodges, Julius Brennecke +4 more

CTCF mediates dosage- and sequence-context-dependent transcriptional insulation by forming local chromatin domains

Nature Genetics(2021)10.1038/s41588-021-00863-6

N/A

0.798DataRank · unranked

203 citations

Quan Zhu, Adam Jussila, Yuanyuan Han, Bogdan Bintu, Colin Kern +13 more

SnapHiC: a computational pipeline to identify chromatin loops from single-cell Hi-C data

Nature Methods(2021)10.1038/s41592-021-01231-2

N/A

0.688DataRank · unranked

97 citations

Armen Abnousi, Yanxiao Zhang, Guoqiang Li, Lindsay Lee, Ziyin Chen +9 more

Single-cell epigenome analysis reveals age-associated decay of heterochromatin domains in excitatory neurons in the mouse brain

Cell Research(2022)10.1038/s41422-022-00719-6

N/A

0.675DataRank · unranked

89 citations

Maria Luisa Amaral, Chenxu Zhu, Steven F. Grieco, Xiaomeng Hou, Lin Lin +6 more

Proteome plasticity in response to persistent environmental change

Molecular Cell(2021)10.1016/j.molcel.2021.06.028

N/A

0.505DataRank · unranked

28 citations

Fan Zheng, Liying Li, Yanxiao Zhang, Catherine E. Chang, Jay R. Unruh +12 more

Integrative analysis of the 3D genome and epigenome in mouse embryonic tissues

Nature Structural & Molecular Biology(2024)10.1038/s41594-024-01431-2

Top 40%

0.482DataRank

Top 40%7 citations

Nathan R. Zemke, Ziyin Chen, Ivan Jurić, Rong Hu, Ramya Raviram +16 more

Simultaneous profiling of DNA methylation and chromatin architecture in mixed populations and in single cells

bioRxiv (Cold Spring Harbor Laboratory)(2018)10.1101/470963

N/A

0.404DataRank · unranked

4 citations

Yaping Liu, Yanxiao Zhang, Rongxin Fang, Sharon L. R. Kardia, Simona Volpi +1 more

SnapHiC-D: a computational pipeline to identify differential chromatin contacts from single cell Hi-C data

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.05.502991

N/A

0.165DataRank · unranked

2 citations

Miao Yu, Xiaoqi Li, Chenxu Zhu, Yanxiao Zhang, Hongyu Yu +4 more

Integrative analysis of the 3D genome and epigenome in mouse embryonic tissues

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.25.489471

Top 78%

0.104DataRank

Top 78%1 citations

Nathan R. Zemke, Ziyin Chen, Ivan Jurić, Rong Hu, Ramya Raviram +15 more

Topologically Associating Domain Boundaries are Commonly Required for Normal Genome Function

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.06.443037

N/A

0DataRank · unranked

10 citations

Iros Barozzi, Yiwen Zhu, Rong Hu, Yanxiao Zhang, Bin Li +20 more

Significant association between host transcriptome‐derived HPV oncogene E6* influence score and carcinogenic pathways, tumor size, and survival in head and neck cancer

Head & Neck(2020)10.1002/hed.26244

N/A

0DataRank · unranked

16 citations

Lada A. Koneva, Yidan Liu, Yanxiao Zhang, Anna E. Arthur, Katie R. Zarins +6 more

Additional file 3: Table S1. of Evidence of reduced recombination rate in human regulatory domains

Figshare(2017)10.6084/m9.figshare.c.3911476_d3

Top 100%

0DataRank

Top 100%0 citations

Abhishek Sarkar, Yanxiao Zhang, Jason Ernst, Sharon L. R. Kardia, Yaping Liu

The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans

UNC Libraries(2020)10.17615/3we9-ae42

Top 100%

0DataRank

Top 100%0 citations

David S. DeLuca, Ayellet V. Segrè, Timothy J. Sullivan, Timothy R. Young, Ellen T. Gelfand +27 more

Cardiac cell type–specific gene regulatory programs and disease risk association

Science Advances(2021)10.1126/sciadv.abf1444

N/A

0DataRank · unranked

146 citations

Olivier Poirion, Fugui Zhu, Justin Buchanan, Kai Zhang, Joshua Chiou +13 more

Additional file 1: Figure S1. of Evidence of reduced recombination rate in human regulatory domains

Figshare(2017)10.6084/m9.figshare.c.3911476_d1

N/A

0DataRank · unranked

0 citations

Abhishek Sarkar, Yanxiao Zhang, Jason Ernst, Sharon L. R. Kardia, Yaping Liu

SnapHiC-D: a computational pipeline to identify differential chromatin contacts from single-cell Hi-C data

Briefings in Bioinformatics(2023)10.1093/bib/bbad315

N/A

0DataRank · unranked

10 citations

Miao Yu, Xiaoqi Li, Chenxu Zhu, Yanxiao Zhang, Hongyu Yu +6 more

A new locus regulating MICALL2 expression was identified for association with executive inhibition in children with attention deficit hyperactivity disorder

UNC Libraries(2024)10.17615/0wm0-qb82

N/A

0DataRank · unranked

0 citations

Dong Liu, Yanxiao Zhang, Baohong Xu, Qing Duan, Qian Cao +13 more

SnapHiC-D: a computational pipeline to identify differential chromatin contacts from single-cell Hi-C data

UNC Libraries(2025)10.17615/0hcp-4r09

N/A

0DataRank · unranked

0 citations

Ziyin Chen, Shreya Mishra, Hongyu Yu, Xiaoqi Li, Miao Yu +6 more

Yanxiao Zhang

Indexed papers

Top data-sharing exemplar

Papers