Subina Mehta

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 24 papers. Top paper: “The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update”.

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update

Nucleic Acids Research(2022)10.1093/nar/gkac247

N/A

1.1DataRank · unranked

1384 citations

Enis Afgan, Anton Nekrutenko, Björn Grüning, Daniel Blankenberg, Jeremy Goecks +89 more

The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update

Nucleic Acids Research(2024)10.1093/nar/gkae410

N/A

1.0DataRank · unranked

889 citations

Linelle Ann L Abueg, Enis Afgan, Olivier Allart, Ahmed Awan, Wendi Bacon +95 more

The microbiologist's guide to metaproteomics

iMeta(2025)10.1002/imt2.70031

N/A

0.593DataRank · unranked

51 citations

Jean Armengaud, Dirk Benndorf, J. Alfredo Blakeley‐Ruiz, Madita Brauer, Kai Cheng +27 more

ASaiM-MT: a validated and optimized ASaiM workflow for metatranscriptomics analysis within Galaxy framework

F1000Research(2021)10.12688/f1000research.28608.1

N/A

0.313DataRank · unranked

5 citations

Marie Crane, Emma Leith, Bérénice Batut, Saskia Hiltemann, Magnus Ø Arntzen +8 more

Galaxy Training: A Powerful Framework for Teaching!

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.02.494505

N/A

0DataRank · unranked

2 citations

Helena Rasche, Simon Gladman, Hans-Rudolf Hotz, Delphine Larivière, Daniel Blankenberg +29 more

An optimized workflow for MS-based quantitative proteomics of challenging clinical bronchoalveolar lavage fluid (BALF) samples

Research Square(2022)10.21203/rs.3.rs-2247886/v1

N/A

0DataRank · unranked

2 citations

Monica Kruk, LeeAnn Higgins, Todd W. Markowski, Pratik Jagtap, Subina Mehta +5 more

Galaxy Training: A powerful framework for teaching!

PLoS Computational Biology(2023)10.1371/journal.pcbi.1010752

N/A

0DataRank · unranked

109 citations

Helena Rasche, Simon Gladman, Hans-Rudolf Hotz, Delphine Larivière, Daniel Blankenberg +29 more

An optimized workflow for MS-based quantitative proteomics of challenging clinical bronchoalveolar lavage fluid (BALF) samples

Clinical Proteomics(2023)10.1186/s12014-023-09404-1

N/A

0DataRank · unranked

22 citations

Monica Kruk, LeeAnn Higgins, Todd W. Markowski, Pratik Jagtap, Subina Mehta +5 more

A novel clinical metaproteomics workflow enables bioinformatic analysis of host-microbe dynamics in disease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.21.568121

N/A

0DataRank · unranked

2 citations

Subina Mehta, Reid Wagner, Dechen Bhuming, Andrew T. Rajczewski, Amy P.N. Skubitz +4 more

An integrated metaproteomics workflow for studying host-microbe dynamics in bronchoalveolar lavage samples applied to cystic fibrosis disease

mSystems(2024)10.1128/msystems.00929-23

N/A

0DataRank · unranked

6 citations

Subina Mehta, Kevin Murray, LeeAnn Higgins, Katherine Do, James E. Johnson +8 more

Multi-omics Visualization Platform: An extensible Galaxy plug-in for multi-omics data visualization and exploration

GigaScience(2020)10.1093/gigascience/giaa025

N/A

0DataRank · unranked

22 citations

James E. Johnson, Praveen Kumar, Ray Sajulga, Subina Mehta, Pratik Jagtap +2 more

Novel approach to exploring protease activity and targets in HIV-associated obstructive lung disease using combined proteomic-peptidomic analysis

Respiratory Research(2024)10.1186/s12931-024-02933-9

N/A

0DataRank · unranked

1 citations

Monica Kruk, Eric F. Lock, Ken M. Kunisaki, Alison Morris, Janice M. Leung +7 more

Results from a Multi-Laboratory Ocean Metaproteomic Intercomparison: Effects of LC-MS Acquisition and Data Analysis Procedures

(2024)10.5194/egusphere-2023-3148

N/A

0DataRank · unranked

4 citations

Jaclyn K. Saunders, Matthew R. McIlvin, Erin M. Bertrand, J. A. Breier, Margaret Mars Brisbin +36 more

Microbiology Galaxy Lab: The first community-driven gateway for reproducible and FAIR analysis of microbial data

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.23.629682

N/A

0DataRank · unranked

2 citations

Nikolaos Pechlivanis, Nikolaos Strepis, Pierre Amato, Matthias Bernt, Anshu Bhardwaj +31 more

Comment on egusphere-2023-3148

(2024)10.5194/egusphere-2023-3148-rc1

N/A

0DataRank · unranked

0 citations

Jaclyn K. Saunders, Matthew R. McIlvin, Erin M. Bertrand, J. A. Breier, Margaret Mars Brisbin +36 more

Novel Approach to Exploring Protease Activity and Targets in HIV-associated Obstructive Lung Disease using Combined Proteomic-Peptidomic Analysis

Research Square(2024)10.21203/rs.3.rs-4433194/v1

N/A

0DataRank · unranked

0 citations

Monica Kruk, Eric F. Lock, Ken M. Kunisaki, Alison Morris, Janice M. Leung +7 more

The Microbiologist’s Guide to Metaproteomics

ChemRxiv(2025)10.26434/chemrxiv-2025-rh2q9

N/A

0DataRank · unranked

4 citations

Jean Armengaud, Dirk Benndorf, J. Blakeley-Ruiz, Madita Brauer, Kai Cheng +24 more

A modular, immunopeptidogenomic (iPepGen) analysis pipeline for discovery, verification, and prioritization of cancer peptide neoantigen candidates

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.07.647596

N/A

0DataRank · unranked

0 citations

Reid Wagner, Katherine Do, James E. Johnson, Fengchao Yu, Tyler Jubenville +8 more

Comparative Performance of Scribe and Database Search Engines in Metaproteomic Profiling of a Ground-Truth Microbiome Dataset

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.15.654320

N/A

0DataRank · unranked

0 citations

Subina Mehta, Reid Wagner, Wassim Gabriel, James E. Johnson, Katherine Do +7 more

Comparative performance of Scribe and database search engines in metaproteomic profiling of a ground-truth microbiome dataset

Journal of Proteomics(2025)10.1016/j.jprot.2025.105549

N/A

0DataRank · unranked

0 citations

Subina Mehta, Reid Wagner, Wassim Gabriel, James E. Johnson, Katherine Do +7 more

A novel clinical metaproteomics workflow enables bioinformatic analysis of host-microbe dynamics in disease

mSphere(2024)10.1128/msphere.00793-23

N/A

0DataRank · unranked

7 citations

Subina Mehta, Reid Wagner, Dechen Bhuming, Andrew T. Rajczewski, Amy P.N. Skubitz +4 more

A rigorous evaluation of optimal peptide targets for MS-based clinical diagnostics of Coronavirus Disease 2019 (COVID-19)

Clinical Proteomics(2021)10.1186/s12014-021-09321-1

N/A

0DataRank · unranked

10 citations

Subina Mehta, Dinh Duy An Nguyen, Björn Grüning, James E. Johnson, Thomas McGowan +3 more

A rigorous evaluation of optimal peptide targets for MS-based clinical diagnostics of Coronavirus Disease 2019 (COVID-19)

medRxiv(2021)10.1101/2021.02.09.21251427

N/A

0DataRank · unranked

0 citations

Subina Mehta, Dinh Duy An Nguyen, Björn Grüning, James E. Johnson, Thomas McGowan +3 more

Quantitative Proteogenomic Characterization of Inflamed Murine Colon Tissue Using an Integrated Discovery, Verification, and Validation Proteogenomic Workflow

Proteomes(2022)10.3390/proteomes10020011

N/A

0DataRank · unranked

2 citations

Qiyuan Han, Subina Mehta, Praveen Kumar, Pratik Jagtap, Charles G. Knutson +4 more