İvet Bahar

Also affiliated with Stony Brook University

Biochemistry, Genetics and Molecular BiologyMaterials ScienceNeuroscienceComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.1Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

QuartataWeb: Integrated Chemical–Protein-Pathway Mapping for Polypharmacology and Chemogenomics

Bioinformatics(2020)10.1093/bioinformatics/btaa210

Top 19%

1.1DataRank

Top 19%25 citations

Fen Pei, D. Lansing Taylor, İvet Bahar, Hongchun Li

Papers

Driven by 92 papers — median percentile 81. Top paper: “Redox lipid reprogramming commands susceptibility of macrophages and microglia to ferroptotic death”.

Redox lipid reprogramming commands susceptibility of macrophages and microglia to ferroptotic death

Nature Chemical Biology(2020)10.1038/s41589-019-0462-8

N/A

8.2DataRank · unranked

641 citations

Qin Yang, Haider H. Dar, Yulia Y. Tyurina, Tamil S. Anthonymuthu, Rina Kim +21 more

A monoclonal antibody against staphylococcal enterotoxin B superantigen inhibits SARS-CoV-2 entry in vitro

Structure(2021)10.1016/j.str.2021.04.005

N/A

2.5DataRank · unranked

39 citations

Rebecca A. Porritt, Magali Noval Rivas, James Krieger, Asli Beyza Ozdemir, Gustavo Garcia +5 more

QuartataWeb: Integrated Chemical–Protein-Pathway Mapping for Polypharmacology and Chemogenomics

Bioinformatics(2020)10.1093/bioinformatics/btaa210

Top 19%

1.1DataRank

Top 19%25 citations

Fen Pei, D. Lansing Taylor, İvet Bahar, Hongchun Li

COVID-19–associated multisystem inflammatory syndrome in children (MIS-C): A novel disease that mimics toxic shock syndrome—the superantigen hypothesis

Journal of Allergy and Clinical Immunology(2020)10.1016/j.jaci.2020.10.008

N/A

0.729DataRank · unranked

128 citations

Rebecca A. Porritt, Mary Hongying Cheng, İvet Bahar, Moshe Arditi, Magali Noval Rivas

Rhapsody: predicting the pathogenicity of human missense variants

Bioinformatics(2020)10.1093/bioinformatics/btaa127

N/A

0.708DataRank · unranked

111 citations

Daniel Peñaherrera, Zoltán N. Oltvai, İvet Bahar, Luca Ponzoni

Multisystem Inflammatory Syndrome in Children and Long COVID: The SARS-CoV-2 Viral Superantigen Hypothesis

Frontiers in Immunology(2022)10.3389/fimmu.2022.941009

N/A

0.704DataRank · unranked

108 citations

Rebecca A. Porritt, Mary Hongying Cheng, İvet Bahar, Moshe Arditi, Magali Noval Rivas

Impact of new variants on SARS-CoV-2 infectivity and neutralization: A molecular assessment of the alterations in the spike-host protein interactions

iScience(2022)10.1016/j.isci.2022.103939

N/A

0.598DataRank · unranked

53 citations

James Krieger, Anupam Banerjee, Yufei Xiang, Burak Kaynak, Yi Shi +3 more

HiDeF: identifying persistent structures in multiscale ‘omics data

Genome biology(2021)10.1186/s13059-020-02228-4

N/A

0.593DataRank · unranked

51 citations

She Zhang, Christopher Churas, Dexter Pratt, İvet Bahar, Trey Ideker +1 more

A systems‐level study reveals host‐targeted repurposable drugs against SARS‐CoV‐2 infection

Molecular Systems Biology(2021)10.15252/msb.202110239

N/A

0.538DataRank · unranked

35 citations

Qingya Shi, Fen Pei, Andreas Vogt, Rebecca A. Porritt, Gustavo Garcia +11 more

Mechanisms of Action of Autophagy Modulators Dissected by Quantitative Systems Pharmacology Analysis

International Journal of Molecular Sciences(2020)10.3390/ijms21082855

N/A

0.520DataRank · unranked

31 citations

Fen Pei, Gary A. Silverman, Stephen C. Pak, David H. Perlmutter, Bing Liu +2 more

A monoclonal antibody against staphylococcal enterotoxin B superantigen inhibits SARS-CoV-2 entry in vitro

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.24.395079

N/A

0.494DataRank · unranked

26 citations

Rebecca A. Porritt, Magali Noval Rivas, James Krieger, Asli Beyza Ozdemir, Gustavo Garcia +5 more

Anomalous peroxidase activity of cytochrome c is the primary pathogenic target in Barth syndrome

Nature Metabolism(2023)10.1038/s42255-023-00926-4

N/A

0.489DataRank · unranked

25 citations

Yulia Y. Tyurina, Karolina Mikulska‐Ruminska, Deena Damschroder, Eduardo Vieira Neto, Alessia Lasorsa +30 more

Structural and Dynamic Effects of PTEN C-Terminal Tail Phosphorylation

Journal of Chemical Information and Modeling(2022)10.1021/acs.jcim.2c00441

N/A

0.449DataRank · unranked

19 citations

Jennifer E. Dawson, James Krieger, Stetson Thacker, İvet Bahar, Charis Eng +1 more

New insight into the significance of KLF4 PARylation in genome stability, carcinogenesis, and therapy

EMBO Molecular Medicine(2020)10.15252/emmm.202012391

N/A

0.442DataRank · unranked

18 citations

Furong Huang, Indira H. Shrivastava, Rui Zhu, Aiping Luo, Michael O. Hottiger +5 more

Identification of a unique TCR repertoire, consistent with a superantigen selection process in Children with Multi-system Inflammatory Syndrome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.09.372169

N/A

0.434DataRank · unranked

17 citations

Lisa Paschold, Magali Noval Rivas, Mary Hongying Cheng, Lael M. Yonker, Harsha Chandnani +10 more

Structural mechanisms for VMAT2 inhibition by tetrabenazine

eLife(2023)10.7554/elife.91973

N/A

0.406DataRank · unranked

14 citations

Mary Hongying Cheng, İvet Bahar, Jonathan A. Coleman, Michael P. Dalton

A Quantitative Systems Pharmacology Platform Reveals NAFLD Pathophysiological States and Targeting Strategies

Metabolites(2022)10.3390/metabo12060528

N/A

0.402DataRank · unranked

11 citations

Mark T. Miedel, Fen Pei, Johanna K. DiStefano, Richard DeBiasio, Tong Ying Shun +13 more

Synthesis and Structure–Activity Relationships for Glutamate Transporter Allosteric Modulators

Journal of Medicinal Chemistry(2024)10.1021/acs.jmedchem.3c01909

N/A

0.385DataRank · unranked

12 citations

Adi Narayana Reddy Poli, Jitendra Gour, Y. V. V. Srikanth, Nicholas Anastasi, Devipriya Ashok +7 more

Activation and Speciation Mechanisms in Class A GPCRs

Journal of Molecular Biology(2022)10.1016/j.jmb.2022.167690

N/A

0.373DataRank · unranked

11 citations

Pemra Doruker, İvet Bahar, Bentley M. Wingert

Structural basis of CMKLR1 signaling induced by chemerin9

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.09.544295

N/A

0.312DataRank · unranked

7 citations

Tina Weiß, Mary Hongying Cheng, Siqi Chen, Carla Katharina Ambrosius, Anne Sophie Czerniak +6 more

Elastic network modeling of cellular networks unveils sensor and effector genes that control information flow

PLoS Computational Biology(2022)10.1371/journal.pcbi.1010181

N/A

0.312DataRank · unranked

7 citations

She Zhang, İvet Bahar, Anne-Ruxandra Carvunis, Omer Acar

InSty: A ProDy Module for Evaluating Protein Interactions and Stability

Journal of Molecular Biology(2025)10.1016/j.jmb.2025.169009

N/A

0.269DataRank · unranked

5 citations

James Krieger, Anupam Banerjee, Xin Cao, Gary D. Wu, Anthony T. Bogetti +5 more

Hydroxamic Acids as PARP‐1 Inhibitors: Molecular Design and Anticancer Activity of Novel Phenanthridinones

Helvetica Chimica Acta(2023)10.1002/hlca.202300133

N/A

0.269DataRank · unranked

5 citations

Olga Bragina, Ji Young Lee, Ivan Semenyuta, Ivar Järving, В. С. Броварец +4 more

Allosteric mechanism in the distinctive coupling of G q and G s to the parathyroid hormone type 1 receptor

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2426178122

N/A

0.241DataRank · unranked

4 citations

Ji Young Lee, Jonathan Pacheco, Ieva Sutkevičiu̅tė, Anju Krishnan Anitha, Heng Liu +8 more

Resistance to Allosteric Inhibitors

Journal of Molecular Biology(2025)10.1016/j.jmb.2025.169133

N/A

0.241DataRank · unranked

4 citations

Isabelle Kwan, Ariel Leyte-Vidal, Neil P. Shah, İvet Bahar, Markus A. Seeliger +1 more

Llamanade : an open-source computational pipeline for robust nanobody humanization

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.03.455003

N/A

0.165DataRank · unranked

2 citations

Yufei Xiang, İvet Bahar, Yi Shi, Zhe Sang

Potent Neutralization of Omicron and other SARS-CoV-2 Variants of Concern by Biparatopic Human VH Domains

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.18.481058

N/A

0.104DataRank · unranked

1 citations

James W. Saville, Michelle M. Martí, Alexandra Schäfer, Mary Hongying Cheng, Dhiraj Mannar +24 more

Rewiring PTH receptor signaling: Hormone dimerization restores endosomal signaling lost in hypocalcemia-linked PTH mutant

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.110913

N/A

0.104DataRank · unranked

1 citations

Satyaki Saha, Ji Young Lee, Kelly J. Culhane, İvet Bahar, Jean‐Pierre Vilardaga +1 more

Binding and Translocation of Substrate Allosterically Promotes Functional Interactions Within the AlkB–AlkG Electron Transfer Complex

Journal of Molecular Biology(2025)10.1016/j.jmb.2025.169548

N/A

0.104DataRank · unranked

1 citations

Matthew Licht, Mehmed Z. Ertem, John Shanklin, Qun Liu, İvet Bahar +1 more

Structural Mechanisms for VMAT2 inhibition by tetrabenazine

(2023)10.7554/elife.91973.1

N/A

0.104DataRank · unranked

1 citations

Mary Hongying Cheng, İvet Bahar, Jonathan A. Coleman, Michael P. Dalton

Potent and broad neutralization of SARS-CoV-2 variants of concern (VOCs) including omicron sub-lineages BA.1 and BA.2 by biparatopic human VH domains

iScience(2022)10.1016/j.isci.2022.104798

N/A

0DataRank · unranked

2 citations

James W. Saville, Michelle M. Martí, Alexandra Schäfer, Mary Hongying Cheng, Dhiraj Mannar +24 more

Structural and Dynamic Effects of PTEN C-terminal Tail Phosphorylation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.16.488508

N/A

0DataRank · unranked

1 citations

Jennifer E. Dawson, James Krieger, Stetson Thacker, İvet Bahar, Charis Eng +1 more

Editorial: Targeting Membrane Proteins: Structure-Function-Dynamics Relationships

Frontiers in Chemistry(2022)10.3389/fchem.2022.862802

N/A

0DataRank · unranked

0 citations

İvet Bahar, Lei Shi, Josep Font, Claire Colas

Potent and Broad Neutralization of SARS-CoV-2 Variants of Concern (VOCs) including Omicron Sub-lineages BA.1 and BA.2 by Biparatopic Human VH Domains

UNC Libraries(2022)10.17615/nnhx-7h96

N/A

0DataRank · unranked

0 citations

Alexandra Schäfer, Michelle M. Martí, Jana L. Jacobs, Wei Li, Kevin D. McCormick +24 more

Formation of protein adducts with Hydroperoxy-PE electrophilic cleavage products during ferroptosis

Redox Biology(2023)10.1016/j.redox.2023.102758

N/A

0DataRank · unranked

29 citations

Tamil S. Anthonymuthu, Alexandr A. Kapralov, Louis J. Sparvero, Indira H. Shrivastava, Karolina Mikulska‐Ruminska +8 more

Discovering selective antiferroptotic inhibitors of the 15LOX/PEBP1 complex noninterfering with biosynthesis of lipid mediators

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2218896120

N/A

0DataRank · unranked

27 citations

Karolina Mikulska‐Ruminska, Yulia Y. Tyurina, Diane K. Luci, Adam Yasgar, Svetlana N. Samovich +23 more

Structural basis of G protein–Coupled receptor CMKLR1 activation and signaling induced by a chemerin-derived agonist

PLoS Biology(2023)10.1371/journal.pbio.3002188

N/A

0DataRank · unranked

20 citations

Tina Weiß, Mary Hongying Cheng, Siqi Chen, Carla Katharina Ambrosius, Anne Sophie Czerniak +6 more

Cooperative mechanics of PR65 scaffold underlies the allosteric regulation of the phosphatase PP2A

Structure(2023)10.1016/j.str.2023.02.012

N/A

0DataRank · unranked

17 citations

Zakaria Larbi Dahmani, Pemra Doruker, Anupam Banerjee, Shang-Hua Yang, Reuven Gordon +3 more

Membrane regulation of 15LOX-1/PEBP1 complex prompts the generation of ferroptotic signals, oxygenated PEs

Free Radical Biology and Medicine(2023)10.1016/j.freeradbiomed.2023.09.001

N/A

0DataRank · unranked

17 citations

Alexandr A. Kapralov, Svetlana N. Samovich, Yulia Y. Tyurina, Vladimir A. Tyurin, Andrew P. VanDemark +6 more

Computational biophysics meets cryo‐EM revolution in the search for the functional dynamics of biomolecular systems

Wiley Interdisciplinary Reviews Computational Molecular Science(2023)10.1002/wcms.1689

N/A

0DataRank · unranked

9 citations

Mert Gür, James Krieger, İvet Bahar, Maurício G. S. Costa

Structural Dynamics Predominantly Determine the Adaptability of Proteins to Amino Acid Deletions

International Journal of Molecular Sciences(2023)10.3390/ijms24098450

N/A

0DataRank · unranked

3 citations

İvet Bahar, Anupam Banerjee

Influence of Point Mutations on PR65 Conformational Adaptability: Insights from Nanoaperture Optical Tweezer Experiments and Molecular Simulations

Research Square(2023)10.21203/rs.3.rs-3599809/v1

N/A

0DataRank · unranked

1 citations

Anupam Banerjee, Samuel Mathew, Mohsin M. Naqvi, Sema Zeynep Yilmaz, Maria Zachoropoulou +7 more

Author Response: Structural Mechanisms for VMAT2 inhibition by tetrabenazine

(2023)10.7554/elife.91973.1.sa4

N/A

0DataRank · unranked

0 citations

Mary Hongying Cheng, İvet Bahar, Jonathan A. Coleman, Michael P. Dalton

Strikingly High Activity of 15‐Lipoxygenase Towards Di‐Polyunsaturated Arachidonoyl/Adrenoyl‐Phosphatidylethanolamines Generates Peroxidation Signals of Ferroptotic Cell Death

Angewandte Chemie International Edition(2024)10.1002/anie.202314710

N/A

0DataRank · unranked

52 citations

Karolina Mikulska‐Ruminska, Haider H. Dar, Yulia Y. Tyurina, Vladimir A. Tyurin, Austin B. Souryavong +17 more

Pharmacological suppression of the OTUD4/CD73 proteolytic axis revives antitumor immunity against immune-suppressive breast cancers

Journal of Clinical Investigation(2024)10.1172/jci176390

N/A

0DataRank · unranked

30 citations

Anupam Banerjee, Ping Xie, Andrei A. Ivanov, Amad Uddin, Qiao Jiao +16 more

Absence of ABL1 exon 2-encoded SH3 residues in BCR::ABL1 destabilizes the autoinhibited kinase conformation and confers resistance to asciminib

Leukemia(2024)10.1038/s41375-024-02353-0

N/A

0DataRank · unranked

11 citations

RosaAnna DeFilippis, Ian R Outhwaite, Isabelle Kwan, Ji Young Lee, Carlyn Leavitt +11 more

Global hinge sites of proteins as target sites for drug binding

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2414333121

N/A

0DataRank · unranked

11 citations

Mert Gür, İvet Bahar, Haotian Zhang

Allosteric modulation of serotonin and dopamine transporters: New insights from computations and experiments

Current Research in Physiology(2024)10.1016/j.crphys.2024.100125

N/A

0DataRank · unranked

10 citations

Mary Hongying Cheng, Ji Young Lee, Shaili Aggarwal, Ole V. Mortensen, İvet Bahar +1 more

Allo-targeting of the kinase domain: Insights from in silico studies and comparison with experiments

Current Opinion in Structural Biology(2024)10.1016/j.sbi.2023.102770

N/A

0DataRank · unranked

9 citations

Emma Gebauer, Markus A. Seeliger, İvet Bahar, Ji Young Lee

WatFinder: a ProDy tool for protein–water interactions

Bioinformatics(2024)10.1093/bioinformatics/btae516

N/A

0DataRank · unranked

6 citations

Frane Doljanin, Anthony T. Bogetti, Feng Zhang, Thiliban Manivarma, İvet Bahar +2 more

Characterization of hyperactive mutations in the renal potassium channel ROMK uncovers unique effects on channel biogenesis and ion conductance

Molecular Biology of the Cell(2024)10.1091/mbc.e23-12-0494

N/A

0DataRank · unranked

3 citations

Shaohu Sheng, Anupam Banerjee, Christopher J. Guerriero, Jingxin Chen, Xueqi Wang +7 more

Structural mechanisms for VMAT2 inhibition by tetrabenazine

eLife(2024)10.7554/elife.91973.2

N/A

0DataRank · unranked

2 citations

Mary Hongying Cheng, İvet Bahar, Jonathan A. Coleman, Michael P. Dalton

Strikingly High Activity of 15‐Lipoxygenase Towards Di‐Polyunsaturated Arachidonoyl/Adrenoyl‐Phosphatidylethanolamines Generates Peroxidation Signals of Ferroptotic Cell Death

Angewandte Chemie(2024)10.1002/ange.202314710

N/A

0DataRank · unranked

0 citations

Karolina Mikulska‐Ruminska, Haider H. Dar, Yulia Y. Tyurina, Vladimir A. Tyurin, Austin B. Souryavong +17 more

Reviewer #3 (Public Review): Structural mechanisms for VMAT2 inhibition by tetrabenazine

(2024)10.7554/elife.91973.2.sa0

N/A

0DataRank · unranked

0 citations

Mary Hongying Cheng, İvet Bahar, Jonathan A. Coleman, Michael P. Dalton

Genetic regulation and targeted reversal of lysosomal dysfunction and inflammatory sterol metabolism in pulmonary arterial hypertension

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.26.582142

N/A

0DataRank · unranked

0 citations

Mona Alotaibi, Hee-Jung Janice Kim, Yi‐Yin Tai, Ying Tang, Wei Sun +24 more

Genome structural dynamics: insights from Gaussian network analysis of Hi-C data

Briefings in Functional Genomics(2024)10.1093/bfgp/elae014

N/A

0DataRank · unranked

0 citations

She Zhang, İvet Bahar, Anupam Banerjee

Lysosomal dysfunction and inflammatory sterol metabolism in pulmonary arterial hypertension

Science(2025)10.1126/science.adn7277

N/A

0DataRank · unranked

47 citations

Mona Alotaibi, Yi‐Yin Tai, Ying Tang, Hee‐Jung J. Kim, Neil J. Kelly +46 more

MGAT1-Guided complex N-Glycans on CD73 regulate immune evasion in triple-negative breast cancer

Nature Communications(2025)10.1038/s41467-025-58524-9

N/A

0DataRank · unranked

12 citations

Ping Xie, Mary Hongying Cheng, Yueming Zhu, Xin Cui, Joshua Watson +19 more

Allosteric modulation of Class B1 G protein-coupled receptor activation and signaling location in the cell

Current Opinion in Structural Biology(2025)10.1016/j.sbi.2025.103170

N/A

0DataRank · unranked

2 citations

Satyaki Saha, Ji Young Lee, Lisa J. Clark, İvet Bahar, Jean‐Pierre Vilardaga

Allosteric Autoregulation of Ferroptosis Suppressor Protein 1 Activity by its N-myristoylated Tail

Journal of Molecular Biology(2025)10.1016/j.jmb.2025.169344

N/A

0DataRank · unranked

3 citations

Xiaowei Bogetti, Ji Young Lee, İvet Bahar, Carlos Ventura

Small Molecule Activators of Protein Phosphatase 2A Exert Global Stabilising Effects on the Scaffold PR65

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.24.666388

N/A

0DataRank · unranked

1 citations

Maria Zacharopoulou, Satyaki Saha, Anupam Banerjee, Zeynep Yılmaz, Vanda Šunderlíková +10 more

Small molecule activator of phosphatase PP2A remodels scaffold PR65 structural dynamics to promote holoenzyme assembly

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.26.690749

N/A

0DataRank · unranked

0 citations

Anupam Banerjee, Satyaki Saha, Michael Ohlmeyer, Reuven Gordon, Laura S. Itzhaki +3 more

Hinge sites in the lipid transfer channel modulate function of the yeast bridge-like transfer protein Vps13

Genetics(2025)10.1093/genetics/iyaf267

N/A

0DataRank · unranked

0 citations

Hoang Linh Nguyen, Mary Hongying Cheng, İvet Bahar, Aaron M. Neiman, Jae-Sook Park

Pharmacologic Suppression of B7-H4 Glycosylation Restores Antitumor Immunity in Immune-Cold Breast Cancers

Cancer Discovery(2020)10.1158/2159-8290.cd-20-0402

N/A

0DataRank · unranked

154 citations

Zhuan Zhou, Hongchun Li, Yifan Xue, Xinghua Lu, İvet Bahar +5 more

Superantigenic character of an insert unique to SARS-CoV-2 spike supported by skewed TCR repertoire in patients with hyperinflammation

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2010722117

N/A

0DataRank · unranked

361 citations

She Zhang, Rebecca A. Porritt, Magali Noval Rivas, Lisa Paschold, Edith Willscher +4 more

Adaptability and specificity: how do proteins balance opposing needs to achieve function?

Current Opinion in Structural Biology(2020)10.1016/j.sbi.2020.08.009

N/A

0DataRank · unranked

22 citations

James Krieger, Hongchun Li, İvet Bahar, Bentley M. Wingert

State-dependent sequential allostery exhibited by chaperonin TRiC/CCT revealed by network analysis of Cryo-EM maps

Progress in Biophysics and Molecular Biology(2020)10.1016/j.pbiomolbio.2020.08.006

N/A

0DataRank · unranked

19 citations

James Krieger, Karolina Mikulska‐Ruminska, Burak Kaynak, Carlos Óscar S. Sorzano, Jose-Maria Carazo +3 more

Modulation of Toroidal Proteins Dynamics in Favor of Functional Mechanisms upon Ligand Binding

Biophysical Journal(2020)10.1016/j.bpj.2020.01.046

N/A

0DataRank · unranked

15 citations

Pemra Doruker, Guang Hu, İvet Bahar, Hongchun Li

Complementary computational and experimental evaluation of missense variants in the ROMK potassium channel

PLoS Computational Biology(2020)10.1371/journal.pcbi.1007749

N/A

0DataRank · unranked

11 citations

Nga H. Nguyen, İvet Bahar, Jeffrey L. Brodsky, Luca Ponzoni

EIF3H Orchestrates Hippo Pathway–Mediated Oncogenesis via Catalytic Control of YAP Stability

Cancer Research(2020)10.1158/0008-5472.can-19-3718

N/A

0DataRank · unranked

44 citations

Honghong Zhou, Luca Ponzoni, Aiping Luo, Rui Zhu, Mingjing He +6 more

Towards gaining sight of multiscale events: utilizing network models and normal modes in hybrid methods

Current Opinion in Structural Biology(2020)10.1016/j.sbi.2020.05.013

N/A

0DataRank · unranked

42 citations

Pemra Doruker, Ana Lígia Scott, David Pérahia, İvet Bahar, James Krieger

An insertion unique to SARS-CoV-2 exhibits superantigenic character strengthened by recent mutations

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.21.109272

N/A

0DataRank · unranked

58 citations

She Zhang, Rebecca A. Porritt, Moshe Arditi, İvet Bahar, Mary Hongying Cheng

Mechanisms of Action of Autophagy Modulators Dissected by Quantitative Systems Pharmacology Analysis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.25.007344

N/A

0DataRank · unranked

10 citations

Fen Pei, David H. Perlmutter, Bing Liu, İvet Bahar, Qingya Shi

Identifying persistent structures in multiscale ‘omics data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.16.151555

N/A

0DataRank · unranked

0 citations

She Zhang, Christopher Churas, Dexter Pratt, İvet Bahar, Trey Ideker +1 more

ProDy 2.0: increased scale and scope after 10 years of protein dynamics modelling with Python

Bioinformatics(2021)10.1093/bioinformatics/btab187

N/A

0DataRank · unranked

229 citations

James Krieger, Yan Zhang, Cihan Kaya, Burak Kaynak, Karolina Mikulska‐Ruminska +4 more

HLA class I–associated expansion of TRBV11-2 T cells in multisystem inflammatory syndrome in children

Journal of Clinical Investigation(2021)10.1172/jci146614

N/A

0DataRank · unranked

194 citations

Lisa Paschold, Magali Noval Rivas, Mary Hongying Cheng, Lael M. Yonker, Harsha Chandnani +11 more

Spatial bias in cAMP generation determines biological responses to PTH type 1 receptor activation

Science Signaling(2021)10.1126/scisignal.abc5944

N/A

0DataRank · unranked

83 citations

Karina A. Peña, Lisa J. Clark, Christian Santa Maria, Shi Liu, Frédéric Jean‐Alphonse +14 more

ClustENMD: efficient sampling of biomolecular conformational space at atomic resolution

Bioinformatics(2021)10.1093/bioinformatics/btab496

N/A

0DataRank · unranked

29 citations

She Zhang, İvet Bahar, Pemra Doruker, Burak Kaynak

NO● Represses the Oxygenation of Arachidonoyl PE by 15LOX/PEBP1: Mechanism and Role in Ferroptosis

International Journal of Molecular Sciences(2021)10.3390/ijms22105253

N/A

0DataRank · unranked

42 citations

Tamil S. Anthonymuthu, Anastasia Levkina, Indira H. Shrivastava, Alexandr A. Kapralov, Hülya Bayır +3 more

Psychomotor impairments and therapeutic implications revealed by a mutation associated with infantile Parkinsonism-Dystonia

eLife(2021)10.7554/elife.68039

N/A

0DataRank · unranked

23 citations

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IUCrJ(2021)10.1107/s2052252521008903

N/A

0DataRank · unranked

22 citations

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Molecular Pharmacology(2021)10.1124/molpharm.121.000400

N/A

0DataRank · unranked

15 citations

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BMC Bioinformatics(2021)10.1186/s12859-021-03959-2

N/A

0DataRank · unranked

10 citations

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The Journal of Chemical Physics(2021)10.1063/5.0046710

N/A

0DataRank · unranked

10 citations

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Frontiers in Chemistry(2021)10.3389/fchem.2021.753990

N/A

0DataRank · unranked

10 citations

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bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.10.426143

N/A

0DataRank · unranked

70 citations

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bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.09.434693

N/A

0DataRank · unranked

0 citations

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bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.04.446730

N/A

0DataRank · unranked

0 citations

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Redox Biology(2022)10.1016/j.redox.2022.102232

N/A

0DataRank · unranked

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Frontiers in Molecular Biosciences(2022)10.3389/fmolb.2022.832847

N/A

0DataRank · unranked

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Endocrine Reviews(2022)10.1210/endrev/bnac032

N/A

0DataRank · unranked

28 citations

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Current Opinion in Structural Biology(2022)10.1016/j.sbi.2022.102517

N/A

0DataRank · unranked

24 citations

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