🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Lindsey Doyle

Fred Hutch Cancer Center

ORCID: 0000-0002-0008-473X
Environmental ScienceEarth and Planetary SciencesComputer ScienceBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 10 papers. Top paper: “Identification and characterization of the WYL BrxR protein and its gene as separable regulatory elements of a BREX phage restriction system”.

Identification and characterization of the WYL BrxR protein and its gene as separable regulatory elements of a BREX phage restriction system

Nucleic Acids Research(2022)10.1093/nar/gkac311
N/A
0.604DataRank · unranked
55 citations

Deanna Hausman, Juliana C. Young, Lindsey Doyle, Kerilyn M. Higashi, Natalia C. Ubilla‐Rodriguez +7 more

Structure, substrate binding and activity of a unique AAA+ protein: the BrxL phage restriction factor

Nucleic Acids Research(2023)10.1093/nar/gkad083
N/A
0.489DataRank · unranked
25 citations

Lindsey Doyle, R. Werther, Abigail A Westburg, Daniel P Bies, Stephanie I Walter +5 more

The structural basis of mRNA recognition and binding by yeast pseudouridine synthase PUS1

PLoS ONE(2023)10.1371/journal.pone.0291267
N/A
0.330DataRank · unranked
8 citations

Lindsey Doyle, Eric J. Wolf, Nan Dai, Ivan R Corrêa, Erbay Yigit +2 more

PglZ from Type I BREX phage defence systems is a metal-dependent nuclease that forms a sub-complex with BrxB

Nucleic Acids Research(2025)10.1093/nar/gkaf540
N/A
0.292DataRank · unranked
6 citations

Lindsey Doyle, Maria Puiu, Abigail Kelly, Andrew Nelson, Alex Kaiser +7 more

Computational design of sequence-specific DNA-binding proteins

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.20.558720
N/A
0DataRank · unranked
28 citations

Robert Pecoraro, Ryan McHugh, Lindsey Doyle, Wei Chen, Olivier Boivin +15 more

Computational design of sequence-specific DNA-binding proteins

Nature Structural & Molecular Biology(2025)10.1038/s41594-025-01669-4
N/A
0DataRank · unranked
23 citations

Robert Pecoraro, Ryan McHugh, Lindsey Doyle, Wei Chen, Olivier Boivin +15 more

De novo design of knotted tandem repeat proteins

Nature Communications(2023)10.1038/s41467-023-42388-y
N/A
0DataRank · unranked
25 citations

Brittany Takushi, Ryan D. Kibler, Lukas F. Milles, Carolina T. Orozco, Jonathan D. Jones +4 more

Design of functionalised circular tandem repeat proteins with longer repeat topologies and enhanced subunit contact surfaces

Communications Biology(2021)10.1038/s42003-021-02766-y
N/A
0DataRank · unranked
10 citations

Lindsey Doyle, Betty Shen, Mesfin Gewe, Brittany Takushi, Madison Kennedy +5 more

Identification and characterization of the WYL BrxR protein and its gene as separable regulatory elements of a BREX phage restriction system

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.19.473356
N/A
0DataRank · unranked
3 citations

Deanna Hausman, Juliana C. Young, Lindsey Doyle, Kerilyn M. Higashi, Natalia C. Ubilla-Rodriquez +7 more

Incorporation of sensing modalities into de novo designed fluorescence-activating proteins

Nature Communications(2021)10.1038/s41467-020-18911-w
N/A
0DataRank · unranked
51 citations

Lindsey Doyle, Justin Daho Lee, Michael Rappleye, Lauren Gagnon, Min Yen Lee +14 more