Bas van Steensel

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 28 papers. Top paper: “Local rewiring of genome–nuclear lamina interactions by transcription”.

Local rewiring of genome–nuclear lamina interactions by transcription

The EMBO Journal(2020)10.15252/embj.2019103159

N/A

2.0DataRank · unranked

103 citations

Peiyao A Zhao, Tom van Schaik, Christ Leemans, Jiao Sima, Daniel Peric‐Hupkes +3 more

Constitutive nuclear lamina–genome interactions are highly conserved and associated with A/T-rich sequence

Genome Research(2012)10.1101/gr.141028.112

N/A

0.929DataRank · unranked

487 citations

Daan Peric-Hupkes, Jop Kind, Jean-Bernard Beaudry, Ludo Pagie, Sharon L. R. Kardia +7 more

Dynamic chromosomal interactions and control of heterochromatin positioning by Ki‐67

EMBO Reports(2022)10.15252/embr.202255782

N/A

0.851DataRank · unranked

39 citations

Stefano Giustino Manzo, Athanasios E Vouzas, Ning Qing Liu, Hans Teunissen, Elzo de Wit +3 more

Major nuclear locales define nuclear genome organization and function beyond A and B compartments

eLife(2024)10.7554/elife.99116

N/A

0.491DataRank · unranked

14 citations

Tom van Schaik, Yuchuan Wang, Pradeep Kumar, Liguo Zhang, Yang Zhang +8 more

Optimized reporters for multiplexed detection of transcription factor activity

Cell Systems(2024)10.1016/j.cels.2024.11.003

N/A

0.374DataRank · unranked

8 citations

Teodora Filipovska, Chaitanya Rastogi, Bas van Steensel, Max Trauernicht

SPIN reveals genome-wide landscape of nuclear compartmentalization

Genome biology(2021)10.1186/s13059-020-02253-3

N/A

0DataRank · unranked

134 citations

Yang Zhang, Ruochi Zhang, Tom van Schaik, Liguo Zhang, Takayo Sasaki +7 more

CTCF and cohesin promote focal detachment of DNA from the nuclear lamina

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.13.460079

N/A

0DataRank · unranked

9 citations

Ning Qing Liu, Stefano Giustino Manzo, Daan Peric‐Hupkes, Elzo de Wit, Bas van Steensel +1 more

Perturbations in 3D genome organization can promote acquired drug resistance

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.02.429315

N/A

0DataRank · unranked

7 citations

Daan Peric Hupkes, Ning Qing Liu, Anoek Friskes, Stacey E. P. Joosten, Hans Teunissen +7 more

Dynamic chromosomal interactions and control of heterochromatin positioning by Ki-67

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.20.465140

N/A

0DataRank · unranked

3 citations

Stefano Giustino Manzo, Athanasios E Vouzas, Ning Qing Liu, Hans Teunissen, Elzo de Wit +3 more

CTCF and cohesin promote focal detachment of DNA from the nuclear lamina

Genome biology(2022)10.1186/s13059-022-02754-3

N/A

0DataRank · unranked

30 citations

Ning Qing Liu, Stefano Giustino Manzo, Daan Peric‐Hupkes, Elzo de Wit, Bas van Steensel +1 more

Genome-Wide Mapping and Microscopy Visualization of Protein–DNA Interactions by pA-DamID

Methods in molecular biology(2022)10.1007/978-1-0716-2140-0_12

N/A

0DataRank · unranked

7 citations

Stefano Giustino Manzo, Bas van Steensel, Tom van Schaik

Protocol: A Multiplexed Reporter Assay to Study Effects of Chromatin Context on DNA Double-Strand Break Repair

Frontiers in Genetics(2022)10.3389/fgene.2021.785947

N/A

0DataRank · unranked

7 citations

Christ Leemans, Eva K. Brinkman, Tom van Schaik, Bas van Steensel, Ruben Schep

Transgenerational transcriptional heterogeneity from cytoplasmic chromatin

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.12.475869

N/A

0DataRank · unranked

10 citations

Nikos A. Mynhier, Shiwei Liu, Etai Jacob, Ema Stokasimov, Bas van Steensel +3 more

Widespread chromatin context-dependencies of DNA double-strand break repair proteins

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.07.511243

N/A

0DataRank · unranked

5 citations

Anna G. Manjón, Ben Morris, Ruben Schep, Christ Leemans, Mathijs A. Sanders +4 more

Heritable transcriptional defects from aberrations of nuclear architecture

Nature(2023)10.1038/s41586-023-06157-7

N/A

0DataRank · unranked

87 citations

Nikos A. Mynhier, Shiwei Liu, Gregory J. Brunette, Ema Stokasimov, Etai Jacob +7 more

Perturbations in 3D genome organization can promote acquired drug resistance

Cell Reports(2023)10.1016/j.celrep.2023.113124

N/A

0DataRank · unranked

20 citations

Stefano Giustino Manzo, Stefan Preković, Leon Potgeter, Tom van Schaik, Ning Qing Liu +13 more

Optimisation of TP53 reporters by systematic dissection of synthetic TP53 response elements

Nucleic Acids Research(2023)10.1093/nar/gkad718

N/A

0DataRank · unranked

10 citations

Chaitanya Rastogi, Stefano Giustino Manzo, Harmen J. Bussemaker, Bas van Steensel, Max Trauernicht

Defining the fine structure of promoter activity on a genome-wide scale with CISSECTOR

Nucleic Acids Research(2023)10.1093/nar/gkad232

N/A

0DataRank · unranked

3 citations

Christ Leemans, Joris van Arensbergen, Bas van Steensel, Harmen J. Bussemaker, Vincent Fitzpatrick

Nucleolus and centromere TSA-Seq reveals variable localization of heterochromatin in different cell types

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.29.564613

N/A

0DataRank · unranked

4 citations

Omid Gholamalamdari, Yang Zhang, Liguo Zhang, Anastassiia Vertii, Tom van Schaik +8 more

Beyond A and B Compartments: how major nuclear locales define nuclear genome organization and function

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.23.590809

N/A

0DataRank · unranked

3 citations

Tom van Schaik, Yuchuan Wang, Pradeep Kumar, Liguo Zhang, Yang Zhang +8 more

Optimized reporters for multiplexed detection of transcription factor activity

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.26.605239

N/A

0DataRank · unranked

1 citations

Teodora Filipovska, Chaitanya Rastogi, Bas van Steensel, Max Trauernicht

Major nuclear locales define nuclear genome organization and function beyond A and B compartments

eLife(2025)10.7554/elife.99116.4

N/A

0DataRank · unranked

11 citations

Tom van Schaik, Yuchuan Wang, Pradeep Kumar, Liguo Zhang, Yang Zhang +8 more

Transcription can be sufficient, but is not necessary, to advance replication timing

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.04.636516

N/A

0DataRank · unranked

4 citations

Takayo Sasaki, Juan Carlos Rivera-Mulia, Jesse L. Turner, Amber N. Brown, Karen E. Alexander +4 more

Author response: Beyond A and B Compartments: how major nuclear locales define nuclear genome organization and function

(2025)10.7554/elife.99116.2.sa0

N/A

0DataRank · unranked

0 citations

Tom van Schaik, Yuchuan Wang, Pradeep Kumar, Liguo Zhang, Yang Zhang +8 more

Cell cycle dynamics of lamina‐associated DNA

EMBO Reports(2020)10.15252/embr.202050636

N/A

0DataRank · unranked

143 citations

Mabel Vos, Daan Peric‐Hupkes, Patrick H. N. Celie, Bas van Steensel, Tom van Schaik

SPIN reveals genome-wide landscape of nuclear compartmentalization

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.09.982967

N/A

0DataRank · unranked

19 citations

Yang Zhang, Ruochi Zhang, Tom van Schaik, Liguo Zhang, Takayo Sasaki +7 more

3D genomics across the tree of life reveals condensin II as a determinant of architecture type

Science(2021)10.1126/science.abe2218

N/A

0DataRank · unranked

302 citations

Olga Dudchenko, Ahmed M.O. Elbatsh, Sumitabha Brahmachari, Jonne A. Raaijmakers, Tom van Schaik +59 more

Impact of chromatin context on Cas9-induced DNA double-strand break repair pathway balance

Molecular Cell(2021)10.1016/j.molcel.2021.03.032

N/A

0DataRank · unranked

215 citations

Eva K. Brinkman, Christ Leemans, Xabier Vergara, Robin H. van der Weide, Ben Morris +8 more