🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Edwin Cuppen

Utrecht University

ORCID: 0000-0002-0400-9542

Also affiliated with University Medical Center Utrecht, Hartwig Medical Foundation

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
2.5Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

CASCAD: a database of annotated candidate single nucleotide polymorphisms associated with expressed sequences

BMC Genomics(2005)10.1186/1471-2164-6-10
Top 8%
2.5DataRank
Top 8%30 citations

Eugene Berezikov, Edwin Cuppen, Victor Guryev

Papers

Driven by 8 papers — median percentile 92. Top paper: “Mutational signature in colorectal cancer caused by genotoxic pks+ E. coli”.

Mutational signature in colorectal cancer caused by genotoxic pks+ E. coli

Nature(2020)10.1038/s41586-020-2080-8
N/A
8.3DataRank · unranked
1184 citations

Jens Puschhof, Axel Rosendahl Huber, Arne van Hoeck, Henry M. Wood, Jason Nomburg +95 more

CONREAL: Conserved Regulatory Elements Anchored Alignment Algorithm for Identification of Transcription Factor Binding Sites by Phylogenetic Footprinting

Genome Research(2004)10.1101/gr.1642804
N/A
4.7DataRank · unranked
97 citations

Victor Guryev, Ronald H.A. Plasterk, Edwin Cuppen, Eugene Berezikov

CASCAD: a database of annotated candidate single nucleotide polymorphisms associated with expressed sequences

BMC Genomics(2005)10.1186/1471-2164-6-10
Top 8%
2.5DataRank
Top 8%30 citations

Eugene Berezikov, Edwin Cuppen, Victor Guryev

Toward effective software solutions for big biology

Nature Biotechnology(2015)10.1038/nbt.3240
N/A
0.546DataRank · unranked
37 citations

Joep de Ligt, Artem Tarasov, Ritsert C. Jansen, Edwin Cuppen, Philip E. Bourne +1 more

EXO1 protects BRCA1-deficient cells against toxic DNA lesions

Molecular Cell(2024)10.1016/j.molcel.2023.12.039
N/A
0DataRank · unranked
39 citations

Anne Schreuder, Raphael Pavani, Veronica Garzero, Sidrit Uruci, Tiemen J. Wendel +14 more

Reconstructing single-cell karyotype alterations in colorectal cancer identifies punctuated and gradual diversification patterns

Nature Genetics(2021)10.1038/s41588-021-00891-2
N/A
0DataRank · unranked
74 citations

Ellen Stelloo, Petra van Leenen, Myrna van den Bos, Bas Ponsioen, Bingxin Lu +21 more

Different responses to DNA damage determine ageing differences between organs

Aging Cell(2022)10.1111/acel.13562
N/A
0DataRank · unranked
29 citations

Joris Demmers, Wilbert P. Vermeij, Marjolein P. Baar, Serena T. Bruens, Aristea Magaraki +10 more

EXO1-mediated DNA repair by single-strand annealing is essential for BRCA1-deficient cells

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.24.529205
N/A
0DataRank · unranked
3 citations

A. Schreuder, Raphael Pavani, Veronica Garzero, Arne van Hoeck, Marta San Martín Alonso +10 more