Katherine Do

ChemistryBiochemistry, Genetics and Molecular BiologyMedicineEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 8 papers. Top paper: “A novel clinical metaproteomics workflow enables bioinformatic analysis of host-microbe dynamics in disease”.

A novel clinical metaproteomics workflow enables bioinformatic analysis of host-microbe dynamics in disease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.21.568121

N/A

0DataRank · unranked

2 citations

Subina Mehta, Reid Wagner, Dechen Bhuming, Andrew T. Rajczewski, Amy P.N. Skubitz +4 more

An integrated metaproteomics workflow for studying host-microbe dynamics in bronchoalveolar lavage samples applied to cystic fibrosis disease

mSystems(2024)10.1128/msystems.00929-23

N/A

0DataRank · unranked

6 citations

Subina Mehta, Kevin Murray, LeeAnn Higgins, Katherine Do, James E. Johnson +8 more

A novel clinical metaproteomics workflow enables bioinformatic analysis of host-microbe dynamics in disease

mSphere(2024)10.1128/msphere.00793-23

N/A

0DataRank · unranked

7 citations

Subina Mehta, Reid Wagner, Dechen Bhuming, Andrew T. Rajczewski, Amy P.N. Skubitz +4 more

Microbiology Galaxy Lab: The first community-driven gateway for reproducible and FAIR analysis of microbial data

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.23.629682

N/A

0DataRank · unranked

2 citations

Nikolaos Pechlivanis, Nikolaos Strepis, Pierre Amato, Matthias Bernt, Anshu Bhardwaj +31 more

A modular, immunopeptidogenomic (iPepGen) analysis pipeline for discovery, verification, and prioritization of cancer peptide neoantigen candidates

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.07.647596

N/A

0DataRank · unranked

0 citations

Reid Wagner, Katherine Do, James E. Johnson, Fengchao Yu, Tyler Jubenville +8 more

Comparative Performance of Scribe and Database Search Engines in Metaproteomic Profiling of a Ground-Truth Microbiome Dataset

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.15.654320

N/A

0DataRank · unranked

0 citations

Subina Mehta, Reid Wagner, Wassim Gabriel, James E. Johnson, Katherine Do +7 more

Evaluation of Parallel Accumulation-Serial Fragmentation methods for metaproteomics using a model microbiome

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.13.670166

N/A

0DataRank · unranked

0 citations

Andrew T. Rajczewski, Katherine Do, Matthew Willets, Manuel Kleiner, Timothy J. Griffin +2 more

Comparative performance of Scribe and database search engines in metaproteomic profiling of a ground-truth microbiome dataset

Journal of Proteomics(2025)10.1016/j.jprot.2025.105549

N/A

0DataRank · unranked

0 citations

Subina Mehta, Reid Wagner, Wassim Gabriel, James E. Johnson, Katherine Do +7 more