Qiao Jin

Also affiliated with North Carolina State University, United States National Library of Medicine, National Institute of Nursing Research, Hangzhou Dianzi University

Computer ScienceMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

4.5Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

PubTator 3.0: an AI-powered literature resource for unlocking biomedical knowledge

Nucleic Acids Research(2024)10.1093/nar/gkae235

Top 6%

3.8DataRank

Top 6%167 citations

Alexis Allot, Po‐Ting Lai, Robert Leaman, Shubo Tian, Ling Luo +5 more

Papers

Driven by 50 papers — median percentile 49. Top paper: “MedCPT: Contrastive Pre-trained Transformers with large-scale PubMed search logs for zero-shot biomedical information retrieval”.

MedCPT: Contrastive Pre-trained Transformers with large-scale PubMed search logs for zero-shot biomedical information retrieval

Bioinformatics(2023)10.1093/bioinformatics/btad651

N/A

5.8DataRank · unranked

144 citations

Won Bae Kim, Qingyu Chen, Donald C. Comeau, Lana Yeganova, W. John Wilbur +2 more

PubTator 3.0: an AI-powered literature resource for unlocking biomedical knowledge

Nucleic Acids Research(2024)10.1093/nar/gkae235

Top 6%

3.8DataRank

Top 6%167 citations

Alexis Allot, Po‐Ting Lai, Robert Leaman, Shubo Tian, Ling Luo +5 more

PubMed and beyond: biomedical literature search in the age of artificial intelligence

EBioMedicine(2024)10.1016/j.ebiom.2024.104988

N/A

2.8DataRank · unranked

119 citations

Robert Leaman, ZHIYONG LU, Qiao Jin

Benchmarking large language models for biomedical natural language processing applications and recommendations

Nature Communications(2025)10.1038/s41467-025-56989-2

N/A

2.5DataRank · unranked

139 citations

Yan Hu, Xueqing Peng, Qianqian Xie, Qiao Jin, Aidan Gilson +16 more

Archive of PubTator 3.0 source code and trained models

PubMed(2024)10.48550/arxiv.2401.11048

Top 32%

0.613DataRank

Top 32%3 citations

Alexis Allot, Po‐Ting Lai, Robert Leaman, Shubo Tian, Ling Luo +5 more

A foundation model for human-AI collaboration in medical literature mining

Nature Communications(2025)10.1038/s41467-025-62058-5

N/A

0.442DataRank · unranked

18 citations

Lang Cao, Qiao Jin, Joey Wing Yan Chan, Nicholas Wan, Behdad Afzali +18 more

Hidden flaws behind expert-level accuracy of multimodal GPT-4 vision in medicine

PubMed(2024)10.48550/arxiv.2401.08396

N/A

0.355DataRank · unranked

2 citations

Fangyuan Chen, Yiliang Zhou, Ziyang Xu, Justin M. Cheung, Robert F. Chen +13 more

Adversarial Attacks on Large Language Models in Medicine

PubMed(2024)10.48550/arxiv.2406.12259

N/A

0.334DataRank · unranked

5 citations

Qiao Jin, Furong Huang, ZHIYONG LU, Yifan Yang

Shadow and Light: Digitally Reconstructed Radiographs for Disease Classification

arXiv (Cornell University)(2024)10.48550/arxiv.2406.03688

Top 71%

0.130DataRank

Top 71%1 citations

Qingqing Zhu, Tejas Sudarshan Mathai, Qiao Jin, ZHIYONG LU, R. Summers +1 more

Hidden flaws behind expert-level accuracy of multimodal GPT-4 vision in medicine

npj Digital Medicine(2024)10.1038/s41746-024-01185-7

N/A

0DataRank · unranked

120 citations

Fangyuan Chen, Yiliang Zhou, Ziyang Xu, Justin M. Cheung, Robert F. Chen +13 more

Advancing entity recognition in biomedicine via instruction tuning of large language models

Bioinformatics(2024)10.1093/bioinformatics/btae163

N/A

0DataRank · unranked

95 citations

Yan Hu, Qianqian Xie, Xueqing Peng, Yan Wang, Andrew Zheng +8 more

Unmasking and quantifying racial bias of large language models in medical report generation

Communications Medicine(2024)10.1038/s43856-024-00601-z

N/A

0DataRank · unranked

82 citations

Xiaoyu Liu, Qiao Jin, Furong Huang, ZHIYONG LU, Yifan Yang

Closing the gap between open source and commercial large language models for medical evidence summarization

npj Digital Medicine(2024)10.1038/s41746-024-01239-w

N/A

0DataRank · unranked

73 citations

Qiao Jin, Yiliang Zhou, Song Wang, Betina Idnay, Hanley Ong +9 more

Quality of Answers of Generative Large Language Models Versus Peer Users for Interpreting Laboratory Test Results for Lay Patients: Evaluation Study

Journal of Medical Internet Research(2024)10.2196/56655

N/A

0DataRank · unranked

50 citations

Balu Bhasuran, Qiao Jin, Shubo Tian, Karim Hanna, Cindy Shavor +4 more

Leveraging generative AI for clinical evidence synthesis needs to ensure trustworthiness

Journal of Biomedical Informatics(2024)10.1016/j.jbi.2024.104640

N/A

0DataRank · unranked

37 citations

Qiao Jin, Denis Jered McInerney, Yong Chen, Fei Wang, Curtis L. Cole +9 more

Response to Letter to Editor ‘Timely need for navigating the potential and downsides of LLMs in healthcare and biomedicine’

Briefings in Bioinformatics(2024)10.1093/bib/bbae211

N/A

0DataRank · unranked

1 citations

Qiao Jin, ZHIYONG LU, Shubo Tian

Benchmarking Retrieval-Augmented Generation for Medicine

(2024)10.18653/v1/2024.findings-acl.372

N/A

0DataRank · unranked

229 citations

Qiao Jin, ZHIYONG LU, Aidong Zhang, Guangzhi Xiong

Improving Retrieval-Augmented Generation in Medicine with Iterative Follow-up Questions

PubMed(2024)10.1142/9789819807024_0015

N/A

0DataRank · unranked

51 citations

Qiao Jin, Xiao Wang, Minjia Zhang, Zhiyong Lu, Aidong Zhang +1 more

Benchmarking Retrieval-Augmented Generation for Medicine

arXiv (Cornell University)(2024)10.48550/arxiv.2402.13178

N/A

0DataRank · unranked

23 citations

Qiao Jin, ZHIYONG LU, Aidong Zhang, Guangzhi Xiong

A Preliminary Study of o1 in Medicine: Are We Closer to an AI Doctor?

arXiv (Cornell University)(2024)10.48550/arxiv.2409.15277

N/A

0DataRank · unranked

15 citations

Jianzhen Wu, Ha T Tu, Siwei Yang, Bin Zhao, Yongshuo Zong +4 more

Risks of AI Scientists: Prioritizing Safeguarding Over Autonomy

arXiv (Cornell University)(2024)10.48550/arxiv.2402.04247

N/A

0DataRank · unranked

13 citations

Qiao Jin, Kunlun Zhu, Tongxin Yuan, Yichi Zhang, Wangchunshu Zhou +8 more

Leveraging Professional Radiologists' Expertise to Enhance LLMs' Evaluation for AI-generated Radiology Reports

PubMed(2024)10.1109/ichi61247.2024.00058

N/A

0DataRank · unranked

12 citations

Xiuying Chen, Qiao Jin, Benjamin Hou, Tejas Sudharshan Mathai, Pritam Mukherjee +4 more

MedCalc-Bench: Evaluating Large Language Models for Medical Calculations

arXiv (Cornell University)(2024)10.52202/079017-2690

N/A

0DataRank · unranked

6 citations

Qiao Jin, Guangzhi Xiong, S.M. Dunn, Serina Applebaum, Zain Anwar +12 more

Enhancing Large Language Models with Domain-specific Retrieval Augment Generation: A Case Study on Long-form Consumer Health Question Answering in Ophthalmology

arXiv (Cornell University)(2024)10.48550/arxiv.2409.13902

N/A

0DataRank · unranked

6 citations

X. C. Ai, Thilaka Arunachalam, Chen, Ziyou, Ki Xiong Cheong, Amisha Dave +17 more

Unmasking and Quantifying Racial Bias of Large Language Models in Medical Report Generation

PubMed(2024)10.48550/arxiv.2401.13867

N/A

0DataRank · unranked

5 citations

Xiaoyu Liu, Qiao Jin, Furong Huang, ZHIYONG LU, Y. F. Yang

Leveraging Professional Radiologists' Expertise to Enhance LLMs' Evaluation for Radiology Reports

PubMed(2024)10.48550/arxiv.2401.16578

N/A

0DataRank · unranked

5 citations

Xiuying Chen, Qiao Jin, Benjamin Hou, Tejas Sudharshan Mathai, Pritam Mukherjee +4 more

Ensuring Safety and Trust: Analyzing the Risks of Large Language Models in Medicine

arXiv (Cornell University)(2024)10.48550/arxiv.2411.14487

N/A

0DataRank · unranked

3 citations

Qiao Jin, Robert Leaman, Xiaoyu Liu, Guangzhi Xiong, Maame Sarfo-Gyamfi +13 more

GeneAgent: Self-verification Language Agent for Gene Set Knowledge Discovery using Domain Databases

PubMed(2024)10.48550/arxiv.2405.16205

N/A

0DataRank · unranked

2 citations

Qiao Jin, Chih-Hsuan Wei, Shubo Tian, Po‐Ting Lai, Qingqing Zhu +4 more

Beyond Multiple-Choice Accuracy: Real-World Challenges of Implementing Large Language Models in Healthcare

arXiv (Cornell University)(2024)10.48550/arxiv.2410.18460

N/A

0DataRank · unranked

0 citations

Qiao Jin, Qingqing Zhu, Zhizheng Wang, Francisco Álvarez, Nicholas Wan +3 more

Evaluating the Impact of Lab Test Results on Large Language Models Generated Differential Diagnoses from Clinical Case Vignettes

arXiv (Cornell University)(2024)10.48550/arxiv.2411.02523

N/A

0DataRank · unranked

0 citations

Qiao Jin, Yuzhang Xie, Carl Yang, Karim Hanna, Jennifer Costa +4 more

A MapReduce Approach to Effectively Utilize Long Context Information in Retrieval Augmented Language Models

arXiv (Cornell University)(2024)10.48550/arxiv.2412.15271

N/A

0DataRank · unranked

0 citations

Zihan Xu, Qiao Jin, Fangyi Chen, Yilu Fang, Yi Liu +6 more

Leveraging long context in retrieval augmented language models for medical question answering

npj Digital Medicine(2025)10.1038/s41746-025-01651-w

N/A

0DataRank · unranked

56 citations

Zihan Xu, Qiao Jin, Fangyi Chen, Yilu Fang, Yi Liu +6 more

Accelerating clinical evidence synthesis with large language models

npj Digital Medicine(2025)10.1038/s41746-025-01840-7

N/A

0DataRank · unranked

43 citations

Lang Cao, Benjamin Danek, Qiao Jin, ZHIYONG LU, Jimeng Sun +1 more

GeneAgent: self-verification language agent for gene-set analysis using domain databases

Nature Methods(2025)10.1038/s41592-025-02748-6

N/A

0DataRank · unranked

41 citations

Qiao Jin, Chih-Hsuan Wei, Shubo Tian, Po‐Ting Lai, Qingqing Zhu +5 more

AgentMD: Empowering language agents for risk prediction with large-scale clinical tool learning

Nature Communications(2025)10.1038/s41467-025-64430-x

N/A

0DataRank · unranked

13 citations

Zhizheng Wang, Yifan Yang, Qingqing Zhu, D. Wright, Thomas Huang +9 more

Adversarial prompt and fine-tuning attacks threaten medical large language models

Nature Communications(2025)10.1038/s41467-025-64062-1

N/A

0DataRank · unranked

8 citations

Qiao Jin, Furong Huang, ZHIYONG LU, Yifan Yang

How well do multimodal LLMs interpret CT scans? An auto-evaluation framework for analyses

Journal of Biomedical Informatics(2025)10.1016/j.jbi.2025.104864

N/A

0DataRank · unranked

7 citations

Benjamin Hou, Tejas Sudharshan Mathai, Pritam Mukherjee, Qiao Jin, Xiuying Chen +5 more

Cell-o1: Training LLMs to Solve Single-Cell Reasoning Puzzles with Reinforcement Learning

PubMed(2025)10.48550/arxiv.2506.02911

N/A

0DataRank · unranked

1 citations

Qiao Jin, Guangzhi Xiong, Bowen Jin, Xianrui Zhong, Siru Ouyang +4 more

Supervising the search process produces reliable and generalizable information-seeking agents

ArXiv.org(2025)10.48550/arxiv.2502.13957

N/A

0DataRank · unranked

1 citations

Qiao Jin, Xiao Wang, Fang Yin, Haolin Liu, Yifan Yang +7 more

MedCite: Can Language Models Generate Verifiable Text for Medicine?

(2025)10.18653/v1/2025.findings-acl.967

N/A

0DataRank · unranked

1 citations

Mengjue Tan, Qiao Jin, Guangzhi Xiong, Yu‐Wen Hu, Aidong Zhang +3 more

Opportunities and challenges for ChatGPT and large language models in biomedicine and health

Briefings in Bioinformatics(2023)10.1093/bib/bbad493

N/A

0DataRank · unranked

354 citations

Qiao Jin, Lana Yeganova, Po‐Ting Lai, Qingqing Zhu, Xiuying Chen +9 more

LabQAR: A Manually Curated Dataset for Question Answering on Laboratory Test Reference Ranges and Interpretation

medRxiv(2025)10.1101/2025.06.03.25328882

Top 100%

0DataRank

Top 100%0 citations

Qiao Jin, Angelique Deville, Yonghui Wu, Karim Hanna, ZHIYONG LU +2 more

Matching Patients to Clinical Trials with Large Language Models

PubMed(2023)10.48550/arxiv.2307.15051

N/A

0DataRank · unranked

42 citations

Zifeng Wang, Charalampos S. Floudas, Fangyuan Chen, Changlin Gong, Dara Bracken‐Clarke +5 more

LADER: Log-Augmented DEnse Retrieval for Biomedical Literature Search

PubMed(2023)10.1145/3539618.3592005

N/A

0DataRank · unranked

10 citations

Ashley Shin, ZHIYONG LU, Qiao Jin

MedCPT: Contrastive Pre-trained Transformers with Large-scale PubMed Search Logs for Zero-shot Biomedical Information Retrieval

arXiv (Cornell University)(2023)10.48550/arxiv.2307.00589

N/A

0DataRank · unranked

9 citations

Won Bae Kim, Qingyu Chen, Donald C. Comeau, Lana Yeganova, W. John Wilbur +2 more

PubMed and Beyond: Biomedical Literature Search in the Age of Artificial Intelligence

arXiv (Cornell University)(2023)10.48550/arxiv.2307.09683

N/A

0DataRank · unranked

4 citations

Robert Leaman, ZHIYONG LU, Qiao Jin

Leveraging Generative AI for Clinical Evidence Summarization Needs to Ensure Trustworthiness

arXiv (Cornell University)(2023)10.48550/arxiv.2311.11211

N/A

0DataRank · unranked

2 citations

Qiao Jin, Denis Jered McInerney, Chen, Yong, Fei Wang, Curtis L. Cole +9 more

LADER: Log-Augmented DEnse Retrieval for Biomedical Literature Search

arXiv (Cornell University)(2023)10.48550/arxiv.2304.04590

N/A

0DataRank · unranked

1 citations

Shin, Ashley, ZHIYONG LU, Qiao Jin

Matching patients to clinical trials with large language models

Nature Communications(2024)10.1038/s41467-024-53081-z

N/A

0DataRank · unranked

213 citations

Zifeng Wang, Charalampos S. Floudas, Fangyuan Chen, Changlin Gong, Dara Bracken‐Clarke +5 more

GeneGPT: augmenting large language models with domain tools for improved access to biomedical information

Bioinformatics(2024)10.1093/bioinformatics/btae075

N/A

0DataRank · unranked

158 citations

Yifan Yang, Qingyu Chen, ZHIYONG LU, Qiao Jin

Qiao Jin

Indexed papers

Top data-sharing exemplar

Papers