🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Frédéric Chédin

University of California, Davis

ORCID: 0000-0002-1306-5335
Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile
0.555Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Exploration and analysis of R-loop mapping data with RLBase

Nucleic Acids Research(2022)10.1093/nar/gkac732
Top 35%
0.555DataRank
Top 35%13 citations

Daniel Montemayor, Janet Li, Simon A. Levy, Roshan Pawar, Stella R. Hartono +5 more

Papers

Driven by 26 papers — median percentile 65. Top paper: “Senataxin and RNase H2 act redundantly to suppress genome instability during class switch recombination”.

Senataxin and RNase H2 act redundantly to suppress genome instability during class switch recombination

eLife(2022)10.7554/elife.78917
N/A
0.646DataRank · unranked
20 citations

Stella R. Hartono, Kirtney Mae Flores de Vera, Zheyuan Yu, Krishni Satchi, Tracy Zhao +5 more

Exploration and analysis of R-loop mapping data with RLBase

Nucleic Acids Research(2022)10.1093/nar/gkac732
Top 35%
0.555DataRank
Top 35%13 citations

Daniel Montemayor, Janet Li, Simon A. Levy, Roshan Pawar, Stella R. Hartono +5 more

Ultra-deep Coverage Single-molecule R-loop Footprinting Reveals Principles of R-loop Formation

Journal of Molecular Biology(2020)10.1016/j.jmb.2020.02.014
N/A
0DataRank · unranked
88 citations

Stella R. Hartono, Jenna M. Giafaglione, Lionel A. Sanz, Frédéric Chédin, Maika Malig

RNA-DNA strand exchange by the Drosophila Polycomb complex PRC2

Nature Communications(2020)10.1038/s41467-020-15609-x
N/A
0DataRank · unranked
73 citations

Victoria Chiwara, Lionel A. Sanz, Daniel Grau, Osvaldo Arias Pérez, Elodie L. Boulier +4 more

SETX (senataxin), the helicase mutated in AOA2 and ALS4, functions in autophagy regulation

Autophagy(2020)10.1080/15548627.2020.1796292
N/A
0DataRank · unranked
65 citations

Shuang Feng, Yueh-Lin Tsai, Wencheng Li, Paola Rinchetti, Ubayed Muhith +13 more

Bisulfite treatment and single-molecule real-time sequencing reveal D-loop length, position, and distribution

eLife(2020)10.7554/elife.59111
N/A
0DataRank · unranked
9 citations

Stella R. Hartono, Frédéric Chédin, Wolf-Dietrich Heyer, Shanaya Shital Shah

Rdh54/Tid1 inhibits Rad51-Rad54-mediated D-loop formation and limits D-loop length

eLife(2020)10.7554/elife.59112
N/A
0DataRank · unranked
29 citations

Stella R. Hartono, Aurèle Piazza, Vanessa Som, William D. Wright, Frédéric Chédin +2 more

SF3B1-targeted Splicing Inhibition Triggers Transcriptional Stress Response and Global Alterations in R-Loop Landscape

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.08.130583
N/A
0DataRank · unranked
22 citations

Stella R. Hartono, M. Hughson Frederick, Lionel A. Sanz, Tadas Sereiva, Frédéric Chédin +1 more

Non-denaturing bisulfite treatment and single-molecule real-time sequencing reveals d-loop footprints, their length, position and distribution

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.20.106617
N/A
0DataRank · unranked
1 citations

Stella R. Hartono, Frédéric Chédin, Wolf-Dietrich Heyer, Shanaya Shital Shah

Recognition of RNA by the S9.6 antibody creates pervasive artifacts when imaging RNA:DNA hybrids

The Journal of Cell Biology(2021)10.1083/jcb.202004079
N/A
0DataRank · unranked
136 citations

Lionel A. Sanz, Stella R. Hartono, Frédéric Chédin, John A. Smolka

Defining R-loop classes and their contributions to genome instability

DNA repair(2021)10.1016/j.dnarep.2021.103182
N/A
0DataRank · unranked
111 citations

Frédéric Chédin, Daisy Castillo-Guzman

CARM1 Inhibition Enables Immunotherapy of Resistant Tumors by Dual Action on Tumor Cells and T Cells

Cancer Discovery(2021)10.1158/2159-8290.cd-20-1144
N/A
0DataRank · unranked
98 citations

Zexian Zeng, Archis Bagati, Rong En Tay, Lionel A. Sanz, Stella R. Hartono +17 more

Best practices for the visualization, mapping, and manipulation of R‐loops

The EMBO Journal(2021)10.15252/embj.2020106394
N/A
0DataRank · unranked
84 citations

Stella R. Hartono, Lionel A. Sanz, Vincent Vanoosthuyse, Frédéric Chédin

Catalytically inactive, purified RNase H1: A specific and sensitive probe for RNA–DNA hybrid imaging

The Journal of Cell Biology(2021)10.1083/jcb.202101092
N/A
0DataRank · unranked
84 citations

Joshua R. Brickner, Chenlin Song, Su Mon Thin Zar, Su S. Maw, Frédéric Chédin +3 more

PRMT1-dependent regulation of RNA metabolism and DNA damage response sustains pancreatic ductal adenocarcinoma

Nature Communications(2021)10.1038/s41467-021-24798-y
N/A
0DataRank · unranked
78 citations

Meredith A. Miller, Chiu-Yi Liu, Stella R. Hartono, Caleb A. Class, Christopher A. Bristow +33 more

Genomic patterns of transcription-replication interactions in mouse primary B cells

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.13.439211
N/A
0DataRank · unranked
5 citations

Hongchang Zhao, Vrishti Sinha, Lionel A. Sanz, Frédéric Chédin, Jacqueline H. Barlow +1 more

Quality-controlled R-loop meta-analysis reveals the characteristics of R-Loop consensus regions

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.01.466823
N/A
0DataRank · unranked
4 citations

Daniel Montemayor, Jabar Babatunde Pacome Agbo Achimi Abdul, Anna Vines, Simon A. Levy, Stella R. Hartono +5 more

Exploration and analysis of R-loop mapping data with RLBase

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.01.466854
N/A
0DataRank · unranked
1 citations

Daniel Montemayor, J. Li, Simon A. Levy, Roshan Pawar, Stella R. Hartono +5 more

Genomic patterns of transcription–replication interactions in mouse primary B cells

Nucleic Acids Research(2022)10.1093/nar/gkac035
N/A
0DataRank · unranked
30 citations

Hongchang Zhao, Vrishti Sinha, Lionel A. Sanz, Frédéric Chédin, Jacqueline H. Barlow +1 more

Quality-controlled R-loop meta-analysis reveals the characteristics of R-loop consensus regions

Nucleic Acids Research(2022)10.1093/nar/gkac537
N/A
0DataRank · unranked
27 citations

Daniel Montemayor, Jebriel Abdul, Anna Vines, Simon A. Levy, Stella R. Hartono +5 more

Data from CARM1 Inhibition Enables Immunotherapy of Resistant Tumors by Dual Action on Tumor Cells and T Cells

(2023)10.1158/2159-8290.c.6549178.v1
N/A
0DataRank · unranked
0 citations

Zexian Zeng, Archis Bagati, Rong En Tay, Lionel A. Sanz, Stella R. Hartono +17 more

Protein-mediated stabilization and nicking of the nontemplate DNA strand dramatically affect R-loop formation in vitro

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2509309122
N/A
0DataRank · unranked
3 citations

Thomas E. Catley, Tadas Sereiva, Stella R. Hartono, Alice L. B. Pyne, Frédéric Chédin +1 more

The R-loop grammar predicts R-loop formation under different topological constraints

PLoS Computational Biology(2025)10.1371/journal.pcbi.1013376
N/A
0DataRank · unranked
2 citations

Svetlana Poznanović, Manda Riehl, Jacob Lusk, Stella R. Hartono, Georgina Gonzalez-Isunza +4 more

Topoisomerase 1 prevents replication stress at R-loop-enriched transcription termination sites

Nature Communications(2020)10.1038/s41467-020-17858-2
N/A
0DataRank · unranked
195 citations

Ismaël Padioleau, Yaqun Liu, Lionel A. Sanz, Anna Biernacka, Anne-Lyne Schmitz +10 more

RNase H1 levels dramatically affect mitochondrial genome maintenance with little impact on nuclear R-loops in murine B cells

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.30.651504
N/A
0DataRank · unranked
0 citations

Stella R. Hartono, Lionel A. Sanz, Eriko Ijiri, Caitlin Darling, Louis Dye +6 more

Emerging roles for R-loop structures in the management of topological stress

Journal of Biological Chemistry(2020)10.1074/jbc.rev119.006364
N/A
0DataRank · unranked
94 citations

Craig J. Benham, Frédéric Chédin