Jun Qu

Roswell Park Comprehensive Cancer Center

Also affiliated with Aerospace Center Hospital, University at Buffalo, State University of New York, Center for Excellence in Education, University of South China

ChemistryMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 43 papers. Top paper: “Ultra-High-Resolution IonStar Strategy Enhancing Accuracy and Precision of MS1-Based Proteomics and an Extensive Comparison with State-of-the-Art SWATH-MS in Large-Cohort Quantification”.

Ultra-High-Resolution IonStar Strategy Enhancing Accuracy and Precision of MS1-Based Proteomics and an Extensive Comparison with State-of-the-Art SWATH-MS in Large-Cohort Quantification

Analytical Chemistry(2021)10.1021/acs.analchem.0c05002

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0.464DataRank · unranked

21 citations

Liang Jin, Chenqi Hu, Shichen Shen, Shuo Qian, Min Ma +6 more

Cyclosporine A Modulates LSP1 Protein Levels in Human B Cells to Attenuate B Cell Migration at Low O2 Levels

Life(2022)10.3390/life12081284

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0.330DataRank · unranked

8 citations

Mukta G. Palshikar, Eric S Mendelson, Shichen Shen, Sailee Rasam, Jason Emo +4 more

Loss of prohibitin 2 in Schwann cells dysregulates key transcription factors controlling developmental myelination

Glia(2024)10.1002/glia.24610

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0.241DataRank · unranked

4 citations

Gustavo Della‐Flora Nunes, Shichen Shen, Seth M. Moore, Joseph Gawron, Jessica Maxwell +9 more

Expression of fibroblast growth factor receptor 1 correlates inversely with the efficacy of single‐agent fibroblast growth factor receptor‐specific inhibitors in pancreatic cancer

British Journal of Pharmacology(2023)10.1111/bph.16289

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0.241DataRank · unranked

4 citations

Andrea Serratore, Jonathan R. Perri, Tista Roy Chaudhuri, Jun Qu, Wen Wee +3 more

RESC14 and RESC8 cooperate to mediate RESC function and dynamics during trypanosome RNA editing

Nucleic Acids Research(2024)10.1093/nar/gkae561

N/A

0.165DataRank · unranked

2 citations

Xiaoyu Zhu, Shichen Shen, Ming Zhang, Jun Qu, Laurie K. Read +1 more

Proteomics analysis reveals novel phosphorylated residues and associated proteins of the polyomavirus DNA replication initiation complex

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.08.579500

N/A

0.104DataRank · unranked

1 citations

Shichen Shen, Jun Qu, Thomas Melendy, Rama Dey-Rao

Protein acylation by saturated very long chain fatty acids and endocytosis are involved in necroptosis

Cell chemical biology(2021)10.1016/j.chembiol.2021.03.012

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0DataRank · unranked

51 citations

Daniel Lu, Laura R. Parisi, Shichen Shen, Ilyas A. Berhane, Samuel L. Galster +8 more

Parallel, High-Quality Proteomic and Targeted Metabolomic Quantification Using Laser Capture Microdissected Tissues

Analytical Chemistry(2021)10.1021/acs.analchem.1c01026

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0DataRank · unranked

28 citations

Jun Li, Shihan Huo, Min Ma, Xiaoyu Zhu, Sailee Rasam +5 more

Regulation of local GTP availability controls RAC1 activity and cell invasion

Nature Communications(2021)10.1038/s41467-021-26324-6

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0DataRank · unranked

44 citations

David W. Wolff, Daniel J. Marston, Zhiyong Deng, Zhannan Han, Sudha Moparthy +19 more

In-depth mapping of protein localizations in whole tissue by micro-scaffold assisted spatial proteomics (MASP)

Nature Communications(2022)10.1038/s41467-022-35367-2

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0DataRank · unranked

38 citations

Shihan Huo, Ming Zhang, Shuo Qian, Xiaoyu Zhu, Jie Pu +7 more

High-quality and robust protein quantification in large clinical/pharmaceutical cohorts with IonStar proteomics investigation

Nature Protocols(2022)10.1038/s41596-022-00780-w

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0DataRank · unranked

27 citations

Xue Wang, Xiaoyu Zhu, Sailee Rasam, Min Ma, Shihan Huo +12 more

Influence of Tyrosine Kinase Inhibition on Organic Anion Transporting Polypeptide 1B3-Mediated Uptake

Molecular Pharmacology(2022)10.1124/molpharm.121.000287

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0DataRank · unranked

17 citations

Kenneth C. Anderson, Elizabeth R. Hayden, Kyle Z. Pasquariello, Alice A. Gibson, Shichen Shen +6 more

Proteomic Analysis of Retinal Mitochondria-Associated ER Membranes Identified Novel Proteins of Retinal Degeneration in Long-Term Diabetes

Cells(2022)10.3390/cells11182819

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0DataRank · unranked

23 citations

Karen Sophia Park, Narayan Dhimal, Shichen Shen, Xixiang Tang, Jun Qu +2 more

Phosphorylation of guanosine monophosphate reductase triggers a GTP-dependent switch from pro- to anti-oncogenic function of EPHA4

Cell chemical biology(2022)10.1016/j.chembiol.2022.01.007

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0DataRank · unranked

15 citations

Zhiyong Deng, Anna Bianchi, C E Foley, Zhannan Han, Xingyou Wang +23 more

Proteomic Network Analysis of Bronchoalveolar Lavage Fluid in Ex-Smokers to Discover Implicated Protein Targets and Novel Drug Treatments for Chronic Obstructive Pulmonary Disease

Pharmaceuticals(2022)10.3390/ph15050566

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0DataRank · unranked

15 citations

Chengjian Tu, Matthew Morris, Spencer Richman, William Mangione, Zackary Falls +5 more

Comparative Proteomic Analysis Identifies Key Metabolic Regulators of Gemcitabine Resistance in Pancreatic Cancer

Molecular & Cellular Proteomics(2022)10.1016/j.mcpro.2022.100409

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0DataRank · unranked

14 citations

Shichen Shen, Zhicheng Qian, Sailee Rasam, Andrea Serratore, William J. Jusko +4 more

Highly Accurate and Robust Absolute Quantification of Target Proteins in Formalin-Fixed Paraffin-Embedded (FFPE) Tissues by LC–MS

Analytical Chemistry(2022)10.1021/acs.analchem.2c03473

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0DataRank · unranked

3 citations

Chao Xue, Shihan Huo, Qingqing Shen, Yang Qu, Xinxin Yang +9 more

Proteomic network analysis of bronchoalveolar lavage fluid in ex-smokers to discover implicated protein targets and novel drug treatments for chronic obstructive pulmonary disease

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.14.480388

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0DataRank · unranked

5 citations

Chengjian Tu, Matthew Morris, Spencer Richman, William Mangione, Zackary Falls +5 more

Dynamic Phosphorylation Regulates Eukaryotic Translation Initiation Factor 4A Activity During the Cell Cycle

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.14.503931

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0DataRank · unranked

0 citations

Robert Zollo, Shichen Shen, Marium Ashraf, Samantha J. Nelson, Gerald B. Koudelka +4 more

Species-Deconvolved Proteomics for In Situ Investigation of Tumor-Stroma Interactions after Treatment of Pancreatic Cancer Patient-Derived Xenografts with Combined Gemcitabine and Paclitaxel

Journal of Proteome Research(2023)10.1021/acs.jproteome.3c00164

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0DataRank · unranked

4 citations

Jin Niu, Shuo Qian, Shichen Shen, Robert M. Straubinger, Jun Qu +1 more

Quantitative Proteomics of Human Retinal Pigment Epithelium Reveals Key Regulators for the Pathogenesis of Age-Related Macular Degeneration

International Journal of Molecular Sciences(2023)10.3390/ijms24043252

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0DataRank · unranked

9 citations

Rebecca J. Kapphahn, Ming Zhang, Shuo Qian, Sandra R. Montezuma, Peng Shang +3 more

Translational control by Trypanosoma brucei DRBD18 contributes to the maintenance of the procyclic state

RNA(2023)10.1261/rna.079625.123

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0DataRank · unranked

5 citations

José Sotelo‐Silveira, Ashutosh Prakash Dubey, Parul Pandey, Joseph T. Smith, Shichen Shen +4 more

Systems Pharmacodynamic Model of Combined Gemcitabine and Trabectedin in Pancreatic Cancer Cells. Part II: Cell Cycle, DNA Damage Response, and Apoptosis Pathways

Journal of Pharmaceutical Sciences(2023)10.1016/j.xphs.2023.10.036

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0DataRank · unranked

3 citations

Gilbert Koch, Shichen Shen, Xue Wang, Jun Li, Xiaomeng Shen +4 more

Systems Pharmacodynamic Model of Combined Gemcitabine and Trabectedin in Pancreatic Cancer Cells. Part I: Effects on Signal Transduction Pathways Related to Tumor Growth

Journal of Pharmaceutical Sciences(2023)10.1016/j.xphs.2023.10.030

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0DataRank · unranked

1 citations

Shichen Shen, Gilbert Koch, Xue Wang, Jun Li, Xiaomeng Shen +4 more

Metabolic interplay between Proteus mirabilis and Enterococcus faecalis facilitates polymicrobial biofilm formation and invasive disease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.17.533237

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0DataRank · unranked

9 citations

Vitus Brix, Joseph Vath, Beryl L. Guterman, Steven M. Taddei, Brian S. Learman +5 more

DNA damaged-induced phosphorylation of a viral replicative DNA helicase results in inhibition of DNA replication through attenuation of helicase function

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.29.560221

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0DataRank · unranked

2 citations

Rama Dey-Rao, Shichen Shen, Jun Qu, Thomas Melendy, Caleb Homiski

Translational control by Trypanosoma brucei DRBD18 contributes to the maintenance of the procyclic state

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.08.527724

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0DataRank · unranked

0 citations

José Sotelo‐Silveira, Joseph T. Smith, Shichen Shen, Jun Qu, Pablo Smircich +2 more

Data from Regulation of OATP1B1 Function by Tyrosine Kinase–mediated Phosphorylation

(2023)10.1158/1078-0432.c.6530622

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0DataRank · unranked

0 citations

Mingqing Chen, Kyle Z. Pasquariello, Alice A. Gibson, James J. Petti, Shichen Shen +11 more

The Complement Factor H (Y402H) risk polymorphism for age-related macular degeneration affects metabolism and response to oxidative stress in the retinal pigment epithelium

Free Radical Biology and Medicine(2024)10.1016/j.freeradbiomed.2024.10.307

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0DataRank · unranked

8 citations

Helena Ambrosino, Johnson Hoang, Zhaohui Geng, Xiaoyu Zhu, Shichen Shen +9 more

Fibroblast growth factor receptor 1 inhibition suppresses pancreatic cancer chemoresistance and chemotherapy-driven aggressiveness

Drug Resistance Updates(2024)10.1016/j.drup.2024.101064

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0DataRank · unranked

9 citations

Andrea Serratore, Jin Niu, Shichen Shen, Tista Roy Chaudhuri, Wen Wee +4 more

A Trapping-Micro-LC-FAIMS/dCV-MS Strategy for Ultrasensitive and Robust Targeted Quantification of Protein Drugs and Biomarkers

Analytical Chemistry(2024)10.1021/acs.analchem.4c01888

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0DataRank · unranked

5 citations

Jie Pu, Chao Xue, Ming Zhang, Yang Qu, Shihan Huo +9 more

Proteomics Analysis of the Polyomavirus DNA Replication Initiation Complex Reveals Novel Functional Phosphorylated Residues and Associated Proteins

International Journal of Molecular Sciences(2024)10.3390/ijms25084540

N/A

0DataRank · unranked

4 citations

Shichen Shen, Jun Qu, Thomas Melendy, Rama Dey-Rao

DNA damage-induced phosphorylation of a replicative DNA helicase results in inhibition of DNA replication through attenuation of helicase function

Nucleic Acids Research(2024)10.1093/nar/gkae663

N/A

0DataRank · unranked

0 citations

Rama Dey-Rao, Shichen Shen, Jun Qu, Thomas Melendy, Caleb Homiski

Biomarkers, Proteoforms, and Mass Spectrometry–Based Assays for Diabetes Clinical Research

The Journal of Clinical Endocrinology & Metabolism(2025)10.1210/clinem/dgaf159

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0DataRank · unranked

9 citations

Tai‐Tu Lin, Annie Moradian, Qingqing Shen, Salvatore Sechi, Michael J. MacCoss +5 more

Multicompartment Quantitative Proteomics Revealing Potential Mechanisms Underlying the Treatment Effects of Mesenchymal-Derived Extracellular Vesicles in a Monkey Model of Cortical Injury

Journal of Proteome Research(2025)10.1021/acs.jproteome.5c00521

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0DataRank · unranked

3 citations

Ryan P. McCann, Shichen Shen, Xiaoyu Zhu, Christina M. Tsillas, Hongqi Xin +8 more

Anticancer Quinolinol Small Molecules Target Multiple Pathways to Promote Cell Death and Eliminate Melanoma Cells Resistant to BRAF Inhibitors

Molecules(2025)10.3390/molecules30132696

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0DataRank · unranked

1 citations

Rati Lama, Alexis D. Kelleher, Erika Rizzo, Samuel L. Galster, Chao Xue +5 more

Improving retinal mitochondrial function as a treatment for age-related macular degeneration

Redox Biology(2020)10.1016/j.redox.2020.101552

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0DataRank · unranked

83 citations

Jorge R. Polanco, Jun Qu, Chengjian Tu, Sandra R. Montezuma, Deborah A. Ferrington +1 more

An Antibody Cocktail-Based Immunoaffinity-LC-MS Method Enabled Ultra-Sensitive and Robust Quantification of Circulating Proinsulin Proteoforms and C-peptide

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.02.657397

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0DataRank · unranked

0 citations

Wang Cao, Ming Zhang, Tai-Tu Lin, Gabriela S. F. Monaco, Lorenz Nierves +8 more

Mutant Kras as a Biomarker Plays a Favorable Role in FL118-Induced Apoptosis, Reactive Oxygen Species (ROS) Production and Modulation of Survivin, Mcl-1 and XIAP in Human Bladder Cancer

Cancers(2020)10.3390/cancers12113413

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0DataRank · unranked

22 citations

Xiang Ling, Ieman Aljahdali, Sailee Rasam, Xue Wang, Jianqun Liao +6 more

A Novel PDE4D Inhibitor BPN14770 Reverses Scopolamine-Induced Cognitive Deficits via cAMP/SIRT1/Akt/Bcl-2 Pathway

Frontiers in Cell and Developmental Biology(2020)10.3389/fcell.2020.599389

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0DataRank · unranked

41 citations

Shichao Gao, Victor Zheng, Ling Chen, Min Ma, Shichen Shen +6 more

Pharmacodynamic modeling of synergistic birinapant/paclitaxel interactions in pancreatic cancer cells

BMC Cancer(2020)10.1186/s12885-020-07398-9

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0DataRank · unranked

5 citations

Xue Wang, Jun Qu, Donald E. Mager, Robert M. Straubinger, Jin Niu

Protein Acylation by Saturated Very Long Chain Fatty Acids and Endocytosis Are Involved in Necroptosis

ChemRxiv(2020)10.26434/chemrxiv.13262771.v1

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0DataRank · unranked

2 citations

Daniel C. Lu, Laura Parisi, Shichen Shen, Ilyas A. Berhane, Samuel L. Galster +8 more

Role of mutant KRAS as a biomarker in FL118-induced apoptosis, reactive oxygen species (ROS) production and inhibition of survivin, Mcl-1 and XIAP in human bladder cancer.

Journal of Clinical Oncology(2020)10.1200/jco.2020.38.15_suppl.e15651

N/A

0DataRank · unranked

0 citations

Ieman Aljahdali, Sailee Rasam, Xue Wang, Xiang Ling, Jianqun Liao +6 more