Muhammad Ali

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.7Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Genome-wide meta-analysis for Alzheimer’s disease cerebrospinal fluid biomarkers

Acta Neuropathologica(2022)10.1007/s00401-022-02454-z

Top 10%

2.1DataRank

Top 10%139 citations

Sven J. van der Lee, Duber Gomez‐Fonseca, Itziar de Rojas, Carolina Dalmasso, Benjamin Grenier‐Boley +95 more

Papers

Driven by 35 papers — median percentile 78. Top paper: “Genome-wide meta-analysis for Alzheimer’s disease cerebrospinal fluid biomarkers”.

Genome-wide meta-analysis for Alzheimer’s disease cerebrospinal fluid biomarkers

Acta Neuropathologica(2022)10.1007/s00401-022-02454-z

Top 10%

2.1DataRank

Top 10%139 citations

Sven J. van der Lee, Duber Gomez‐Fonseca, Itziar de Rojas, Carolina Dalmasso, Benjamin Grenier‐Boley +95 more

Proteo-genomics of soluble TREM2 in cerebrospinal fluid provides novel insights and identifies novel modulators for Alzheimer’s disease

Molecular Neurodegeneration(2024)10.1186/s13024-023-00687-4

N/A

0.601DataRank · unranked

54 citations

Niko-Petteri Nykänen, Daniel Western, Priyanka Gorijala, Jigyasha Timsina, Fuhai Li +28 more

Genome-wide meta-analysis for Alzheimer’s disease cerebrospinal fluid biomarkers

medRxiv(2022)10.1101/2022.03.08.22271043

Top 35%

0.564DataRank

Top 35%12 citations

Sven J. van der Lee, Duber Gomez‐Fonseca, Itziar de Rojas, Carolina Dalmasso, Benjamin Grenier‐Boley +95 more

CYP1B1-RMDN2 Alzheimer’s disease endophenotype locus identified for cerebral tau PET

Nature Communications(2024)10.1038/s41467-024-52298-2

N/A

0.461DataRank · unranked

12 citations

Shannon L. Risacher, Liana G. Apostolova, Paula J. Bice, Jared R. Brosch, Rachael Deardorff +57 more

Novel CYP1B1-RMDN2 Alzheimer’s disease locus identified by genome-wide association analysis of cerebral tau deposition on PET

medRxiv(2023)10.1101/2023.02.27.23286048

N/A

0.343DataRank · unranked

5 citations

Shannon L. Risacher, Liana G. Apostolova, Paula J. Bice, Jared R. Brosch, Rachael Deardorff +56 more

Novel early‐onset Alzheimer‐associated genes influence risk through dysregulation of glutamate, immune activation, and intracellular signaling pathways

Alzheimer s & Dementia(2025)10.1002/alz.70377

N/A

0.312DataRank · unranked

7 citations

Cyril Pottier, Eder Lúcio da Fonseca, Jiji T. Kurup, Daniel Western, Ciyang Wang +22 more

Harmonization of CSF and imaging biomarkers in Alzheimer's disease: Need and practical applications for genetics studies and preclinical classification

Neurobiology of Disease(2023)10.1016/j.nbd.2023.106373

N/A

0DataRank · unranked

47 citations

Muhammad Ali, Anh Do, Lihua Wang, Daniel Western, Yun Ju Sung +2 more

Large‐scale proteome and metabolome analysis of CSF implicates altered glucose and carbon metabolism and succinylcarnitine in Alzheimer's disease

Alzheimer s & Dementia(2023)10.1002/alz.13130

N/A

0DataRank · unranked

45 citations

Justin McKetney, Yuetiva Deming, Autumn Morrow, Gilda E. Ennis, Erin M. Jonaitis +17 more

Cell-free RNA signatures predict Alzheimer’s disease

iScience(2023)10.1016/j.isci.2023.108534

N/A

0DataRank · unranked

13 citations

Aleksandra Beric, Muhammad Ali, Jose Adrian Pardo, Hsiang‐Han Chen, María Victoria Fernández +10 more

Proteogenomic analysis of human cerebrospinal fluid identifies neurologically relevant regulation and informs causal proteins for Alzheimer’s disease

Research Square(2023)10.21203/rs.3.rs-2814616/v1

N/A

0DataRank · unranked

41 citations

Daniel Western, Jigyasha Timsina, Lihua Wang, Ciyang Wang, Chengran Yang +26 more

Unique genetic architecture of CSF and brain metabolites pinpoints the novel targets for the traits of human wellness

Research Square(2023)10.21203/rs.3.rs-2923409/v1

N/A

0DataRank · unranked

10 citations

Daniel Western, Chengran Yang, Muhammad Ali, Lihua Wang, Priyanka Gorijala +19 more

Harmonization of CSF and imaging biomarkers for Alzheimer’s disease biomarkers: need and practical applications for genetics studies and preclinical classification

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.24.542118

N/A

0DataRank · unranked

8 citations

Muhammad Ali, Anh Do, Lihua Wang, Yun Ju Sung, Carlos Cruchaga +1 more

Proteo-genomics of soluble TREM2 in cerebrospinal fluid provides novel insights and identifies novel modulators for Alzheimer’s disease

medRxiv(2023)10.1101/2023.06.14.23291409

N/A

0DataRank · unranked

3 citations

Niko-Petteri Nykänen, Daniel Western, Priyanka Gorijala, Jigyasha Timsina, Fuhai Li +26 more

Proteogenomic analysis of human cerebrospinal fluid identifies neurologically relevant regulation and implicates causal proteins for Alzheimer’s disease

Nature Genetics(2024)10.1038/s41588-024-01972-8

N/A

0DataRank · unranked

70 citations

Jigyasha Timsina, Lihua Wang, Ciyang Wang, Chengran Yang, Carlos Cruchaga +37 more

CSF proteomics identifies early changes in autosomal dominant Alzheimer’s disease

Cell(2024)10.1016/j.cell.2024.08.049

N/A

0DataRank · unranked

61 citations

Jigyasha Timsina, Gyujin Heo, Aleksandra Beric, Muhammad Ali, Ciyang Wang +88 more

Genetic architecture of cerebrospinal fluid and brain metabolite levels and the genetic colocalization of metabolites with human traits

Nature Genetics(2024)10.1038/s41588-024-01973-7

N/A

0DataRank · unranked

32 citations

Chengran Yang, Daniel Western, Muhammad Ali, Yueyao Wang, Chia‐Ling Phuah +23 more

Post‐GWAS multiomic functional investigation of the TNIP1 locus in Alzheimer's disease highlights a potential role for GPX3

Alzheimer s & Dementia(2024)10.1002/alz.13848

N/A

0DataRank · unranked

10 citations

Lianne M. Reus, Muhammad Ali, Jihua Liu, Yuetiva Deming, Qiongshi Lu +18 more

Multi-cohort cerebrospinal fluid proteomics identifies robust molecular signatures for asymptomatic and symptomatic Alzheimer’s disease.

Research Square(2024)10.21203/rs.3.rs-3631708/v1

N/A

0DataRank · unranked

14 citations

Muhammad Ali, Yuanyuan Shen, Anh Do, Lihua Wang, Daniel Western +23 more

Systematic proteomics in Autosomal dominant Alzheimer’s disease reveals decades-early changes of CSF proteins in neuronal death, and immune pathways

medRxiv(2024)10.1101/2024.01.12.24301242

N/A

0DataRank · unranked

11 citations

Muhammad Ali, Jigyasha Timsina, Ciyang Wang, Anh Do, Daniel Western +32 more

CSF proteomic profiling with amyloid/tau positivity identifies distinctive sex-different alteration of multiple proteins involved in Alzheimer’s disease

medRxiv(2024)10.1101/2024.03.15.24304164

N/A

0DataRank · unranked

7 citations

Muhammad Ali, Jigyasha Timsina, Lihua Wang, Daniel Western, Menghan Liu +12 more

Synapse protein signatures in cerebrospinal fluid and plasma predict cognitive maintenance versus decline in Alzheimer’s disease

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.22.604680

N/A

0DataRank · unranked

5 citations

Deniz Yagmur Urey, Linda Karlsson, Zeyu Zhu, Yuanyuan Shen, Amelia Farinas +28 more

A cerebrospinal fluid synaptic protein biomarker for prediction of cognitive resilience versus decline in Alzheimer’s disease

Nature Medicine(2025)10.1038/s41591-025-03565-2

N/A

0DataRank · unranked

96 citations

Deniz Yagmur Urey, Linda Karlsson, Zeyu Zhu, Yuanyuan Shen, Amelia Farinas +33 more

The Global Neurodegeneration Proteomics Consortium: biomarker and drug target discovery for common neurodegenerative diseases and aging

Nature Medicine(2025)10.1038/s41591-025-03834-0

N/A

0DataRank · unranked

95 citations

Rowan Saloner, Jacob W. Vogel, Varsha Krish, Gamal Abdel-Azim, Muhammad Ali +47 more

Multi-cohort cerebrospinal fluid proteomics identifies robust molecular signatures across the Alzheimer disease continuum

Neuron(2025)10.1016/j.neuron.2025.02.014

N/A

0DataRank · unranked

52 citations

Jigyasha Timsina, Daniel Western, Menghan Liu, Aleksandra Beric, John Budde +24 more

Shared and disease-specific pathways in frontotemporal dementia and Alzheimer’s and Parkinson’s diseases

Nature Medicine(2025)10.1038/s41591-025-03833-1

N/A

0DataRank · unranked

28 citations

Buddhiprabha Erabadda, Yike Chen, Ying Xu, Katherine Gong, Menghan Liu +13 more

Patient stratification by genetic risk in Alzheimer’s disease is only effective in the presence of phenotypic heterogeneity

PLoS ONE(2025)10.1371/journal.pone.0310977

N/A

0DataRank · unranked

4 citations

Muhammad Ali, Chloe Robins, Praveen Surendran, Padhraig Gormley, for the Alzheimer’s Disease Neuroimaging Initiative (ADNI) +3 more

GWAS meta-analysis of CSF Alzheimer's disease biomarkers 18,948 individuals reveal novel loci and genes regulating lipid metabolism, brain volume and autophagy

Research Square(2025)10.21203/rs.3.rs-6597595/v1

N/A

0DataRank · unranked

1 citations

Jigyasha Timsina, Chenyang Jiang, Daniel L. McCartney, Feifei Tao, Carolina Dalmasso +95 more

Protein-based Diagnosis and Analysis of Co-pathologies Across Neurodegenerative Diseases: Large-Scale AI-Boosted CSF and Plasma Classification

medRxiv(2025)10.1101/2025.07.09.25331192

N/A

0DataRank · unranked

1 citations

Daniel Western, Gyujin Heo, Kwangsik Nho, Yen-Ning Huang, Shiwei Liu +25 more

Examining the effects of cigarette smoke on mouse lens through a multi OMIC approach

Scientific Reports(2021)10.1038/s41598-021-95013-7

N/A

0DataRank · unranked

8 citations

Muhammad Ali, Yura Jang, Taekyung Ryu, Andrew J. Schwab, Brian O. Ingram +5 more

Protein-based Diagnosis and Analysis of Co-pathologies Across Neurodegenerative Diseases: Large-Scale AI-Boosted CSF and Plasma Classification

Research Square(2025)10.21203/rs.3.rs-6933762/v1

N/A

0DataRank · unranked

0 citations

Ying Xu, Daniel Western, Gyujin Heo, Kwangsik Nho, Yen-Ning Huang +23 more

Leveraging large multi-center cohorts of Alzheimer Disease endophenotypes to understand the role of Klotho heterozygosity on disease risk

medRxiv(2021)10.1101/2021.10.07.21264646

N/A

0DataRank · unranked

3 citations

Yun Ju Sung, Fengxian Wang, María Victoria Fernández, John C. Morris, Anne M. Fagan +19 more

Large-scale proteome and metabolome analysis of CSF implicates altered glucose metabolism and succinylcarnitine in Alzheimer’s disease

medRxiv(2021)10.1101/2021.09.02.21262642

N/A

0DataRank · unranked

2 citations

Justin McKetney, Yuetiva Deming, Autumn Morrow, Gilda E. Ennis, Erin M. Jonaitis +17 more

Leveraging large multi-center cohorts of Alzheimer disease endophenotypes to understand the role of Klotho heterozygosity on disease risk

PLoS ONE(2022)10.1371/journal.pone.0267298

N/A

0DataRank · unranked

23 citations

Yun Ju Sung, Fengxian Wang, María Victoria Fernández, John C. Morris, Anne M. Fagan +23 more

Post-GWAS multiomic functional investigation of the TNIP1 locus in Alzheimer’s disease implicates mediation through GPX3

medRxiv(2022)10.1101/2022.11.04.22277162

N/A

0DataRank · unranked

2 citations

Lianne M. Reus, Muhammad Ali, Jihua Liu, Yuetiva Deming, Qiongshi Lu +18 more

Large multi-ethnic genetic analyses of amyloid imaging identify new genes for Alzheimer disease

Acta Neuropathologica Communications(2023)10.1186/s40478-023-01563-4

N/A

0DataRank · unranked

58 citations

Derek B. Archer, Priyanka Gorijala, Daniel Western, Jigyasha Timsina, María Victoria Fernández +49 more

Muhammad Ali

Indexed papers

Top data-sharing exemplar

Papers