🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Jeremy J. Yang

Translational Informatics Division, Department of Internal Medicine, University of New Mexico School of Medicine, Albuquerque, NM, USA

ORCID: 0000-0002-1476-6192
Computer ScienceDecision SciencesEarth and Planetary Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
17.4Author DataRank

Indexed papers

8in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 8 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

DrugCentral 2021 supports drug discovery and repositioning

Nucleic Acids Research(2020)10.1093/nar/gkaa997
Top 4%
5.5DataRank
Top 4%207 citations

Cristian Bologa, Jayme Holmes, Giovanni Bocci, Thomas B. Wilson, Ðắc-Trung Nguyễn +9 more

Papers

Driven by 26 papers — median percentile 91. Top paper: “DrugCentral 2021 supports drug discovery and repositioning”.

DrugCentral 2021 supports drug discovery and repositioning

Nucleic Acids Research(2020)10.1093/nar/gkaa997
Top 4%
5.5DataRank
Top 4%207 citations

Cristian Bologa, Jayme Holmes, Giovanni Bocci, Thomas B. Wilson, Ðắc-Trung Nguyễn +9 more

TCRD and Pharos 2021: mining the human proteome for disease biology

Nucleic Acids Research(2020)10.1093/nar/gkaa993
Top 5%
4.2DataRank
Top 5%177 citations

Stephen L. Mathias, Keith J. Kelleher, Vishal B. Siramshetty, Ðắc-Trung Nguyễn, Cristian Bologa +14 more

DrugCentral 2023 extends human clinical data and integrates veterinary drugs

Nucleic Acids Research(2022)10.1093/nar/gkac1085
Top 8%
2.7DataRank
Top 8%92 citations

Thomas B. Wilson, Ramona Curpăn, Liliana Halip, Ana Borota, Alina Bora +6 more

Pharos 2023: an integrated resource for the understudied human proteome

Nucleic Acids Research(2022)10.1093/nar/gkac1033
Top 9%
2.3DataRank
Top 9%133 citations

Timothy Sheils, Stephen L. Mathias, Jeremy J. Yang, Vincent T. Metzger, Vishal B. Siramshetty +12 more

Machine learning prediction and tau-based screening identifies potential Alzheimer’s disease genes relevant to immunity

Communications Biology(2022)10.1038/s42003-022-03068-7
Top 15%
1.4DataRank
Top 15%52 citations

Oleg Ursu, Cristian Bologa, Shanya Jiang, Nicole Maphis, Somayeh Dadras +8 more

Overview of the Knowledge Management Center for Illuminating the Druggable Genome

Drug Discovery Today(2024)10.1016/j.drudis.2024.103882
Top 30%
0.678DataRank
Top 30%13 citations

Cristian Bologa, Jayme Holmes, Stephen L. Mathias, Vincent T. Metzger, Anna Waller +9 more

A machine learning platform to estimate anti-SARS-CoV-2 activities

Nature Machine Intelligence(2021)10.1038/s42256-021-00335-w
N/A
0.648DataRank · unranked
74 citations

Giovanni Bocci, Srijan Verma, Md Mahmudulla Hassan, Jayme Holmes, Jeremy J. Yang +3 more

Getting Started with the IDG KMC Datasets and Tools

Current Protocols(2022)10.1002/cpz1.355
Top 38%
0.511DataRank
Top 38%12 citations

Jessica Binder, Jeremy J. Yang, Jayme Holmes, Alexander Lachmann, Daniel J. B. Clarke +7 more

Formalizing drug indications on the road to therapeutic intent

Journal of the American Medical Informatics Association(2017)10.1093/jamia/ocx064
N/A
0.345DataRank · unranked
9 citations

Tudor I. Oprea, Oleg Ursu, Cristian G Bologa, Amrapali Zaveri, Jayme Holmes +7 more

Node-degree aware edge sampling mitigates inflated classification performance in biomedical random walk-based graph representation learning

Bioinformatics Advances(2024)10.1093/bioadv/vbae036
N/A
0.330DataRank · unranked
8 citations

Lauren Rekerle, Tommaso Fontana, Peter Hansen, Elena Casiraghi, Vida Ravanmehr +12 more

Autophagy dark genes: Can we find them with machine learning?

Natural Sciences(2023)10.1002/ntls.20220067
N/A
0.292DataRank · unranked
6 citations

Jeremy J. Yang, Praveen Kumar, Daniel R. Byrd, Elaine L. Bearer, Tudor I. Oprea +1 more

TIN-X version 3: update with expanded dataset and modernized architecture for enhanced illumination of understudied targets

PeerJ(2024)10.7717/peerj.17470
N/A
0.269DataRank · unranked
4 citations

Daniel C. Cannon, Jeremy J. Yang, Stephen L. Mathias, Cristian Bologa, Anna Waller +9 more

A machine learning platform to estimate anti-SARS-CoV-2 activities

ChemRxiv(2021)10.26434/chemrxiv.12915779.v3
N/A
0.197DataRank · unranked
2 citations

Giovanni Bocci, Srijan Verma, Mahmudulla Hassan, Jayme Holmes, Jeremy J. Yang +3 more

KG2ML: integrating knowledge graphs and positive unlabeled learning for identifying disease-associated genes

Frontiers in Bioinformatics(2026)10.3389/fbinf.2025.1727953
N/A
0.104DataRank · unranked
1 citations

Vincent T. Metzger, Swastika T. Purushotham, Priyansh Kedia, Cristian G. Bologa, Christophe G. Lambert +2 more

ReproTox-KG: Toxicology Knowledge Graph for Structural Birth Defects

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.15.508198
N/A
0DataRank · unranked
1 citations

Daniel J. B. Clarke, Zhuorui Xie, Giacomo B. Marino, Vivian Utti, Taha M. Ahooyi +13 more

Node-degree aware edge sampling mitigates inflated classification performance in biomedical graph representation learning

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.21.517376
N/A
0DataRank · unranked
1 citations

Lauren Rekerle, Tommaso Fontana, Peter Hansen, Elena Casiraghi, Vida Ravanmehr +12 more

Toxicology knowledge graph for structural birth defects

Communications Medicine(2023)10.1038/s43856-023-00329-2
N/A
0DataRank · unranked
22 citations

Daniel J. B. Clarke, Zhuorui Xie, Giacomo B. Marino, Vivian Utti, Sherry L. Jenkins +13 more

REDIAL-2020: A Suite of Machine Learning Models to Estimate Anti-SARS-CoV-2 Activities

ChemRxiv(2020)10.26434/chemrxiv.12915779.v2
N/A
0DataRank · unranked
1 citations

Giovanni Bocci, Srijan Verma, Mahmudulla Hassan, Jayme Holmes, Jeremy J. Yang +3 more

REDIAL-2020: A suite of machine learning models to estimate Anti-SARS-CoV-2 activities

PubMed(2020)10.21203/rs.3.rs-76894/v1
N/A
0DataRank · unranked
6 citations

Giovanni Bocci, Srijan Verma, Md. Rakibul Hassan, Jayme Holmes, Jeremy J. Yang +3 more

A machine learning platform to estimate anti-SARS-CoV-2 activities

ChemRxiv(2020)10.26434/chemrxiv.12915779
N/A
0DataRank · unranked
6 citations

Giovanni Bocci, Srijan Verma, Mahmudulla Hassan, Jayme Holmes, Jeremy J. Yang +3 more

TIGA: Target illumination GWAS analytics

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.11.378596
N/A
0DataRank · unranked
0 citations

Dhouha Grissa, Christophe G. Lambert, Cristian Bologa, Stephen L. Mathias, Anna Waller +4 more

Computational drug repositioning identifies niclosamide and tribromsalan as inhibitors of Mycobacterium tuberculosis and Mycobacterium abscessus

Tuberculosis(2024)10.1016/j.tube.2024.102500
N/A
0DataRank · unranked
5 citations

Aaron Goff, David Wild, Ying Ding, Ayano Annis, Randy Kerber +10 more

TIGA: target illumination GWAS analytics

Bioinformatics(2021)10.1093/bioinformatics/btab427
N/A
0DataRank · unranked
18 citations

Dhouha Grissa, Christophe G. Lambert, Cristian Bologa, Stephen L. Mathias, Anna Waller +4 more

The Data Distillery: A Graph Framework for Semantic Integration and Querying of Biomedical Data

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.11.666099
N/A
0DataRank · unranked
3 citations

Benjamin Stear, John K. Simmons, Vincent T. Metzger, Praveen Kumar, John Erol Evangelista +39 more

KG2ML: Integrating Knowledge Graphs and Positive Unlabeled Learning for Identifying Disease-Associated Genes

medRxiv(2025)10.1101/2025.03.17.25323906
N/A
0DataRank · unranked
1 citations

Vincent T. Metzger, Swastika T. Purushotham, Priyansh Kedia, Cristian Bologa, Christophe G. Lambert +2 more

Detecting Opioid Use Disorder in Health Claims Data With Positive Unlabeled Learning

IEEE Journal of Biomedical and Health Informatics(2024)10.1109/jbhi.2024.3515805
N/A
0DataRank · unranked
6 citations

Fariha Moomtaheen, Scott A. Malec, Jeremy J. Yang, Cristian Bologa, Kristan A. Schneider +9 more