Yang Zhang

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

1.9Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Complete sequencing of ape genomes

Nature(2025)10.1038/s41586-025-08816-3

Top 16%

1.3DataRank

Top 16%128 citations

Arang Rhie, Prajna Hebbar, Francesca Antonacci, Glennis A. Logsdon, Steven J. Solar +123 more

Papers

Driven by 32 papers — median percentile 75. Top paper: “Fasting-induced FGF21 signaling activates hepatic autophagy and lipid degradation via JMJD3 histone demethylase”.

Fasting-induced FGF21 signaling activates hepatic autophagy and lipid degradation via JMJD3 histone demethylase

Nature Communications(2020)10.1038/s41467-020-14384-z

N/A

5.5DataRank · unranked

215 citations

Sunmi Seok, Young‐Chae Kim, Yang Zhang, Peter M. Yau, Naoki Iwamori +5 more

Toward the solution of the protein structure prediction problem

Journal of Biological Chemistry(2021)10.1016/j.jbc.2021.100870

N/A

3.7DataRank · unranked

123 citations

Yang Zhang, Robin Pearce

An Evolution-Based Approach to De Novo Protein Design and Case Study on Mycobacterium tuberculosis

PLoS Computational Biology(2013)10.1371/journal.pcbi.1003298

N/A

2.2DataRank · unranked

60 citations

David Shultis, Jeffrey R. Brender, Jeff Czajka, David Marsh, Felicia Gray +3 more

Intestinal FGF15/19 physiologically repress hepatic lipogenesis in the late fed-state by activating SHP and DNMT3A

Nature Communications(2020)10.1038/s41467-020-19803-9

N/A

1.9DataRank · unranked

73 citations

Sunmi Seok, Yang Zhang, Jian Ma, Bo Kong, Grace L. Guo +3 more

Domain Watcher: Detecting Malicious Domains Based on Local and Global Textual Features

Procedia Computer Science(2017)10.1016/j.procs.2017.05.204

N/A

1.6DataRank · unranked

14 citations

Tingwen Liu, Yang Zhang, Jing Ya, Jinqiao Shi, Yubin Wang +1 more

PAML 4: Phylogenetic Analysis by Maximum Likelihood

Molecular Biology and Evolution(2007)10.1093/molbev/msm088

N/A

1.4DataRank · unranked

14689 citations

Yang Zhang, Z. Yang

In Vivo Termini Amino Acid Labeling for Quantitative Proteomics

Analytical Chemistry(2011)10.1021/ac201035f

N/A

1.4DataRank · unranked

26 citations

Lei Zhang, Guo-Quan Yan, Jun Yao, Yang Zhang, Hao-Jie Lu +3 more

Complete sequencing of ape genomes

Nature(2025)10.1038/s41586-025-08816-3

Top 16%

1.3DataRank

Top 16%128 citations

Arang Rhie, Prajna Hebbar, Francesca Antonacci, Glennis A. Logsdon, Steven J. Solar +123 more

Blinded Testing of Function Annotation for uPE1 Proteins by I-TASSER/COFACTOR Pipeline Using the 2018–2019 Additions to neXtProt and the CAFA3 Challenge

Journal of Proteome Research(2019)10.1021/acs.jproteome.9b00537

N/A

0.959DataRank · unranked

24 citations

Lydie Lane, Gilbert S. Omenn, Yang Zhang, Chengxin Zhang

Poly(A)-DG: A deep-learning-based domain generalization method to identify cross-species Poly(A) signal without prior knowledge from target species

PLoS Computational Biology(2020)10.1371/journal.pcbi.1008297

N/A

0.855DataRank · unranked

12 citations

Haohan Wang, Yang Zhang, Xin Gao, Eric P. Xing, Min Xu +1 more

The Somatic Mosaicism across Human Tissues Network

Nature(2025)10.1038/s41586-025-09096-7

N/A

0.672DataRank · unranked

43 citations

Ji Won Oh, Yujin Angelina Choi, Nam Seop Lim, Boxun Zhao, Adam Voshall +365 more

Complete sequencing of ape genomes

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.31.605654

Top 34%

0.582DataRank

Top 34%26 citations

Arang Rhie, Prajna Hebbar, Francesca Antonacci, Glennis A. Logsdon, Steven J. Solar +123 more

Inhibition of influenza A virus replication by a marine derived quinolone alkaloid targeting virus nucleoprotein

Journal of Medical Virology(2023)10.1002/jmv.28499

N/A

0.563DataRank · unranked

15 citations

Wei‐Feng Xu, Yunjia Yu, Qun Zhang, Lianghao Huang, Cui Hao +3 more

Major nuclear locales define nuclear genome organization and function beyond A and B compartments

eLife(2024)10.7554/elife.99116

N/A

0.491DataRank · unranked

14 citations

Tom van Schaik, Yuchuan Wang, Pradeep Kumar, Liguo Zhang, Yang Zhang +8 more

Toward the solution of the protein‐structure prediction problem

The FASEB Journal(2020)10.1096/fasebj.2020.34.s1.00169

N/A

0.309DataRank · unranked

6 citations

Yang Zhang

Nucleome Browser: An integrative and multimodal data navigation platform for 4D Nucleome

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.21.481225

N/A

0.104DataRank · unranked

1 citations

Yang Zhang, Yuchuan Wang, Dechao Tian, Andrew S. Belmont, Jason R. Swedlow +2 more

Research progress on endovascular treatment of Stanford Type A aortic dissection

Frontiers in Cardiovascular Medicine(2025)10.3389/fcvm.2025.1641559

N/A

0.104DataRank · unranked

1 citations

Yang Zhang, Alexandra P. Lewis, Yuanyuan Guo, Yue Xiao

MOCHI enables discovery of heterogeneous interactome modules in 3D nucleome

Genome Research(2020)10.1101/gr.250316.119

N/A

0DataRank · unranked

18 citations

Ruochi Zhang, Yang Zhang, Xiaopeng Zhu, Jian Ma, Dechao Tian

SPIN reveals genome-wide landscape of nuclear compartmentalization

Genome biology(2021)10.1186/s13059-020-02253-3

N/A

0DataRank · unranked

134 citations

Yang Zhang, Ruochi Zhang, Tom van Schaik, Liguo Zhang, Takayo Sasaki +7 more

Nucleome Browser: an integrative and multimodal data navigation platform for 4D Nucleome

Nature Methods(2022)10.1038/s41592-022-01559-3

N/A

0DataRank · unranked

28 citations

Yang Zhang, Yuchuan Wang, Dechao Tian, Andrew S. Belmont, Jason R. Swedlow +2 more

Feeding activates FGF15‐SHP‐TFEB‐mediated lipophagy in the gut

The EMBO Journal(2022)10.15252/embj.2021109997

N/A

0DataRank · unranked

19 citations

Young‐Chae Kim, Yang Zhang, Bo Kong, Grace L. Guo, Jian Ma +3 more

Concert: Genome-wide prediction of sequence elements that modulate DNA replication timing

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.21.488684

N/A

0DataRank · unranked

3 citations

Yuchuan Wang, Yang Zhang, Jian Ma, Yang Yang

Computational methods for analysing multiscale 3D genome organization

Nature Reviews Genetics(2023)10.1038/s41576-023-00638-1

N/A

0DataRank · unranked

92 citations

Lorenzo Boninsegna, Muyu Yang, Tom Misteli, Frank Alber, Jian Ma +1 more

Nucleolus and centromere TSA-Seq reveals variable localization of heterochromatin in different cell types

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.29.564613

N/A

0DataRank · unranked

4 citations

Omid Gholamalamdari, Yang Zhang, Liguo Zhang, Anastassiia Vertii, Tom van Schaik +8 more

Beyond A and B Compartments: how major nuclear locales define nuclear genome organization and function

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.23.590809

N/A

0DataRank · unranked

3 citations

Tom van Schaik, Yuchuan Wang, Pradeep Kumar, Liguo Zhang, Yang Zhang +8 more

Major nuclear locales define nuclear genome organization and function beyond A and B compartments

eLife(2025)10.7554/elife.99116.4

N/A

0DataRank · unranked

11 citations

Tom van Schaik, Yuchuan Wang, Pradeep Kumar, Liguo Zhang, Yang Zhang +8 more

DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks

Nature Communications(2025)10.1038/s41467-025-65077-4

N/A

0DataRank · unranked

2 citations

Zhenqiao Song, Yang Zhang, Shike Wang, Danqing Wang, Muyu Yang +3 more

Study on GPU-accelerated extraction of interconnects parasitic using CUDA and MPI

Digests of the 2010 14th Biennial IEEE Conference on Electromagnetic Field Computation(2010)10.1109/cefc.2010.5481435

N/A

0DataRank · unranked

0 citations

Guoqiang Liu, Hui Qu, Wei Xu, Yang Zhang, Xiaoyu Xu

Author response: Beyond A and B Compartments: how major nuclear locales define nuclear genome organization and function

(2025)10.7554/elife.99116.2.sa0

N/A

0DataRank · unranked

0 citations

Tom van Schaik, Yuchuan Wang, Pradeep Kumar, Liguo Zhang, Yang Zhang +8 more

Antagonism between splicing and microprocessor complex dictates the serum-induced processing of lnc-MIRHG for efficient cell cycle reentry

RNA(2020)10.1261/rna.075309.120

N/A

0DataRank · unranked

18 citations

Qinyu Hao, Yo-Chuen Lin, You Jin Song, Sushant Bangru, Waqar Arif +12 more

TSA-seq reveals a largely conserved genome organization relative to nuclear speckles with small position changes tightly correlated with gene expression changes

Genome Research(2020)10.1101/gr.266239.120

N/A

0DataRank · unranked

152 citations

Yang Zhang, Yu Chen, Omid Gholamalamdari, Yuchuan Wang, Jian Ma +2 more

SPIN reveals genome-wide landscape of nuclear compartmentalization

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.09.982967

N/A

0DataRank · unranked

19 citations

Yang Zhang, Ruochi Zhang, Tom van Schaik, Liguo Zhang, Takayo Sasaki +7 more

Yang Zhang

Indexed papers

Top data-sharing exemplar

Papers