Savaş Tay

ORCID: 0000-0002-1912-6020

EngineeringPhysics and AstronomyBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 30 papers. Top paper: “Automated microfluidic platform for dynamic and combinatorial drug screening of tumor organoids”.

Automated microfluidic platform for dynamic and combinatorial drug screening of tumor organoids

Nature Communications(2020)10.1038/s41467-020-19058-4

N/A

4.0DataRank · unranked

411 citations

Michael Junkin, Sara Saheb Kashaf, Isabel Romero‐Calvo, Kori Kirby, J. Matthews +5 more

OrganoID: A versatile deep learning platform for tracking and analysis of single-organoid dynamics

PLoS Computational Biology(2022)10.1371/journal.pcbi.1010584

N/A

0.739DataRank · unranked

137 citations

Brooke Schuster, Sara Saheb Kashaf, Ping Liu, Rakefet Ben-Yishay, Dana Ishay-Ronen +9 more

A drug repurposing screen identifies decitabine as an HSV-1 antiviral

Microbiology Spectrum(2024)10.1128/spectrum.01754-24

N/A

0.504DataRank · unranked

15 citations

Cody Sirimanotham, Jason A. Espinoza, Dillon Cheng, Savaş Tay, Nir Drayman +1 more

Quantification of proteins, protein complexes and mRNA in single cells by proximity-sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.15.098780

N/A

0DataRank · unranked

4 citations

Hoang Van Phan, Christian Jordi, Mengjie Chen, Sai T. Reddy, Savaş Tay +1 more

Masitinib is a broad coronavirus 3CL inhibitor that blocks replication of SARS-CoV-2

Science(2021)10.1126/science.abg5827

N/A

0DataRank · unranked

257 citations

Jennifer K. DeMarco, Krysten A. Jones, Saara‐Anne Azizi, Heather M. Froggatt, Kemin Tan +33 more

High-throughput RNA sequencing of paraformaldehyde-fixed single cells

Nature Communications(2021)10.1038/s41467-021-25871-2

N/A

0DataRank · unranked

75 citations

Michiel van Gent, Nir Drayman, Anindita Basu, Michaela U. Gack, Savaş Tay +1 more

Discovery of SARS-CoV-2 main protease inhibitors using a synthesis-directed de novo design model

Chemical Communications(2021)10.1039/d1cc00050k

N/A

0DataRank · unranked

38 citations

William McCorkindale, The COVID Moonshot Consortium, Nir Drayman, John D. Chodera, Savaş Tay +3 more

Sensitive detection and quantification of SARS-CoV-2 in saliva

Scientific Reports(2021)10.1038/s41598-021-91835-7

N/A

0DataRank · unranked

31 citations

Blake Flood, Jing Lin, Şefika Özcan, Sherin J. Rouhani, Athalia R. Pyzer +22 more

Computer vision reveals hidden variables underlying NF-κB activation in single cells

Science Advances(2021)10.1126/sciadv.abg4135

N/A

0DataRank · unranked

17 citations

Nir Drayman, Ping Liu, Mustafa Bilgic, Savaş Tay, Parthiv Patel

Cannabidiol Inhibits SARS-CoV-2 Replication and Promotes the Host Innate Immune Response

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.10.432967

N/A

0DataRank · unranked

64 citations

Dongbo Yang, Vlad Nicolaescu, Thomas J. Best, Takashi Ohtsuki, Shao‐Nong Chen +16 more

Severe COVID-19 infection is associated with aberrant cytokine production by infected lung epithelial cells rather than by systemic immune dysfunction

Research Square(2021)10.21203/rs.3.rs-1083825/v1

N/A

0DataRank · unranked

10 citations

Sherin J. Rouhani, Jonathan Trujillo, Athalia R. Pyzer, Jovian Yu, Jessica Fessler +28 more

Herpesviral induction of germline transcription factor DUX4 is critical for viral gene expression

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.24.436599

N/A

0DataRank · unranked

5 citations

Vedran Franke, Nir Drayman, Emanuel Wyler, Savaş Tay, Markus Landthaler +4 more

SARS-CoV-2 diverges from other betacoronaviruses in only partially activating the IRE1α/XBP1 ER stress pathway in human lung-derived cells

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.30.474519

N/A

0DataRank · unranked

5 citations

David M. Renner, Diane Silva, Dongbo Yang, Nicholas A. Parenti, Kaeri M. Medina +20 more

Spatiotemporal NF-κB dynamics encodes the position, amplitude and duration of local immune inputs

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.30.470463

N/A

0DataRank · unranked

2 citations

Tino Frank, Thomas Holst‐Hansen, Andrew Wang, Michael Junkin, Sara Saheb Kashaf +3 more

A comprehensive SARS-CoV-2–human protein–protein interactome reveals COVID-19 pathobiology and potential host therapeutic targets

Nature Biotechnology(2022)10.1038/s41587-022-01474-0

N/A

0DataRank · unranked

203 citations

Yuan Liu, Shagun Gupta, Mauricio I. Paramo, Yuan Hou, Chengsheng Mao +18 more

Sensitive detection and quantification of SARS-CoV-2 in saliva

medRxiv(2020)10.1101/2020.12.04.20241059

N/A

0DataRank · unranked

21 citations

Blake Flood, Jing Lin, Şefika Özcan, Sherin J. Rouhani, Athalia R. Pyzer +20 more

Spatiotemporal NF-κB dynamics encodes the position, amplitude, and duration of local immune inputs

Science Advances(2022)10.1126/sciadv.abn6240

N/A

0DataRank · unranked

46 citations

Tino Frank, Thomas Holst‐Hansen, Andrew G. Wang, Michael Junkin, Sara Saheb Kashaf +3 more

NF-κB memory coordinates transcriptional responses to dynamic inflammatory stimuli

Cell Reports(2022)10.1016/j.celrep.2022.111159

N/A

0DataRank · unranked

42 citations

Minjun Son, Emma Kenna, Nicholas Thom, Savaş Tay, Andrew G. Wang

SARS-CoV-2 Diverges from Other Betacoronaviruses in Only Partially Activating the IRE1α/XBP1 Endoplasmic Reticulum Stress Pathway in Human Lung-Derived Cells

mBio(2022)10.1128/mbio.02415-22

N/A

0DataRank · unranked

29 citations

David M. Renner, Diane Silva, Dongbo Yang, Nicholas A. Parenti, Kaeri M. Medina +20 more

NF-κB memory coordinates transcriptional responses to dynamic inflammatory stimuli

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.14.476099

N/A

0DataRank · unranked

3 citations

Minjun Son, Nicholas Thom, Savaş Tay, Andrew G. Wang

Processing stimulus dynamics by the NF-κB network in single cells

Experimental & Molecular Medicine(2023)10.1038/s12276-023-01133-7

N/A

0DataRank · unranked

30 citations

Andrew G. Wang, Bijentimala Keisham, Savaş Tay, Minjun Son

High-throughput co-culture system for analysis of spatiotemporal cell-cell signaling

Biosensors and Bioelectronics(2023)10.1016/j.bios.2023.115089

N/A

0DataRank · unranked

10 citations

Andrew G. Wang, Emma Kenna, Savaş Tay, Minjun Son

Herpesviruses mimic zygotic genome activation to promote viral replication

Research Square(2023)10.21203/rs.3.rs-3125635/v1

N/A

0DataRank · unranked

5 citations

Stephanie Wälter, Eva Neugebauer, Tan Jiang, Nir Drayman, Vedran Franke +6 more

Computational prediction of protein interactions on single cells by proximity sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.27.550388

N/A

0DataRank · unranked

1 citations

Hoang Van Phan, Luke Vistain, Mengjie Chen, Aly A. Khan, Savaş Tay +1 more

Inflammation-Induced Claudin-2 Upregulation Limits Pancreatitis Progression by Enhancing Tight Junction-Controlled Pancreatic Ductal Transport

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.01.555960

N/A

0DataRank · unranked

0 citations

Yueying Li, Junjie Xing, Melissa Tracy, Kristin Wannemo, Aysha Holder +15 more

Single-cell chemoproteomics identifies metastatic activity signatures in breast cancer

Science Advances(2024)10.1126/sciadv.adp2622

N/A

0DataRank · unranked

10 citations

Olivia C. Laxton, Gang Li, Jing Lin, Olga Karginova, Rita Nanda +4 more

Computational prediction of protein interactions in single cells by proximity sequencing

PLoS Computational Biology(2024)10.1371/journal.pcbi.1011915

N/A

0DataRank · unranked

3 citations

Hoang Van Phan, Luke Vistain, Mengjie Chen, Aly A. Khan, Savaş Tay +1 more

Macrophage memory emerges from coordinated transcription factor and chromatin dynamics

Cell Systems(2025)10.1016/j.cels.2025.101171

N/A

0DataRank · unranked

10 citations

Minjun Son, Aleksandr Gorin, Emma Kenna, Abinash Padhi, Bijentimala Keisham +4 more

Fixed single-cell RNA sequencing for understanding virus infection and host response

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.17.302232

N/A

0DataRank · unranked

6 citations

Michiel van Gent, Nir Drayman, Anindita Basu, Michaela U. Gack, Savaş Tay +1 more

Herpesviruses mimic zygotic genome activation to promote viral replication

Nature Communications(2025)10.1038/s41467-025-55928-5

N/A

0DataRank · unranked

15 citations

Stephanie Wälter, Tan Jiang, Nir Drayman, Vedran Franke, Michiel van Gent +13 more