Robert J. Coffey

Also affiliated with Nashville VA Medical Center, Tennessee Oncology, Vanderbilt University Medical Center

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

6.6Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution

Cell(2020)10.1016/j.cell.2020.03.053

Top 4%

5.6DataRank

Top 4%609 citations

Aviv Regev, Philipp Oberdoerffer, Tal Nawy, Anna Hupalowska, Jennifer E. Rood +92 more

Papers

Driven by 52 papers — median percentile 56. Top paper: “The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution”.

The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution

Cell(2020)10.1016/j.cell.2020.03.053

Top 4%

5.6DataRank

Top 4%609 citations

Aviv Regev, Philipp Oberdoerffer, Tal Nawy, Anna Hupalowska, Jennifer E. Rood +92 more

MITI minimum information guidelines for highly multiplexed tissue images

Nature Methods(2022)10.1038/s41592-022-01415-4

N/A

1.7DataRank · unranked

88 citations

Clarence Yapp, Artem Sokolov, Sheila M. Reynolds, Yu-An Chen, Damir Sudar +95 more

Differential pre-malignant programs and microenvironment chart distinct paths to malignancy in human colorectal polyps

Cell(2021)10.1016/j.cell.2021.11.031

N/A

0.871DataRank · unranked

332 citations

Cherie’ R. Scurrah, Eliot T. McKinley, Alan J. Simmons, Marisol A. Ramirez-Solano, Xiangzhu Zhu +48 more

exRNA-eCLIP intersection analysis reveals a map of extracellular RNA binding proteins and associated RNAs across major human biofluids and carriers

Cell Genomics(2023)10.1016/j.xgen.2023.100303

Top 30%

0.671DataRank

Top 30%19 citations

Alessandra Stürchler, Robert Fullem, David Chen, Anne C Starner, Emmanuel Esquivel +25 more

Systematic Assessment of Small RNA Profiling in Human Extracellular Vesicles

Cancers(2023)10.3390/cancers15133446

N/A

0.482DataRank · unranked

10 citations

Hua-Chang Chen, Quanhu Sheng, T. Renee Dawson, Robert J. Coffey, James G. Patton +4 more

Human colorectal pre-cancer atlas identifies distinct molecular programs underlying two major subclasses of pre-malignant tumors

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.11.426044

Top 59%

0.262DataRank

Top 59%3 citations

Eliot T. McKinley, Alan J. Simmons, Marisol Ramirez‐Solano, Xiangzhu Zhu, Austin N. Southard-Smith +23 more

Murine intrarectal instillation of purified recombinant C. difficile toxins enables mechanistic studies of pathogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.30.274738

N/A

0DataRank · unranked

0 citations

Sarah C. Bloch, John A. Shupe, Erin N. Laubacher, M. Kay Washington, Robert J. Coffey +2 more

Supermeres are functional extracellular nanoparticles replete with disease biomarkers and therapeutic targets

Nature Cell Biology(2021)10.1038/s41556-021-00805-8

N/A

0DataRank · unranked

412 citations

Dennis K. Jeppesen, James N. Higginbotham, Ramona Graves‐Deal, Vincent Quoc‐Huy Trinh, Marisol Ramirez +23 more

MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging

Nature Methods(2021)10.1038/s41592-021-01308-y

N/A

0DataRank · unranked

245 citations

Artem Sokolov, Clarence Yapp, Yu‐An Chen, Jeremy L. Muhlich, Joshua M. Hess +22 more

Translocator protein-targeted photodynamic therapy for direct and abscopal immunogenic cell death in colorectal cancer

Acta Biomaterialia(2021)10.1016/j.actbio.2021.07.052

N/A

0DataRank · unranked

43 citations

Zhen Li, Yang Liu, Dawei Zhang, Meng Su, Hiroaki Niitsu +4 more

Quantifying and correcting slide-to-slide variation in multiplexed immunofluorescence images

Bioinformatics(2021)10.1093/bioinformatics/btab877

N/A

0DataRank · unranked

38 citations

Eliot T. McKinley, Joseph T. Roland, Qi Liu, Martha J. Shrubsole, Ken S. Lau +4 more

First-in-Human PET Imaging and Estimated Radiation Dosimetry of l-[5-11C]-Glutamine in Patients with Metastatic Colorectal Cancer

Journal of Nuclear Medicine(2021)10.2967/jnumed.120.261594

N/A

0DataRank · unranked

30 citations

Joe Grudzinski, Gary T. Smith, Todd E. Peterson, Jennifer G. Whisenant, Tiffany L. Hickman +9 more

Depletion of METTL3 alters cellular and extracellular levels of miRNAs containing m6A consensus sequences

Heliyon(2021)10.1016/j.heliyon.2021.e08519

N/A

0DataRank · unranked

17 citations

Jeffrey L. Franklin, Margaret A. Clement, Scott A. Hinger, Ryan M. Allen, Xiao Liu +10 more

Induction of apically mistrafficked epiregulin disrupts epithelial polarity via aberrant EGFR signaling

Journal of Cell Science(2021)10.1242/jcs.255927

N/A

0DataRank · unranked

3 citations

Galina Bogatcheva, Evan Krystofiak, Eliot T. McKinley, Salisha Hill, Kristie L. Rose +3 more

MCMICRO: A scalable, modular image-processing pipeline for multiplexed tissue imaging

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.15.435473

N/A

0DataRank · unranked

43 citations

Artem Sokolov, Clarence Yapp, Jeremy L. Muhlich, Joshua M. Hess, Jia‐Ren Lin +16 more

Quantifying and correcting slide-to-slide variation in multiplexed immunofluorescence images

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.16.452359

N/A

0DataRank · unranked

6 citations

Eliot T. McKinley, Joseph T. Roland, Qipei LIU, Martha J. Shrubsole, Ken S. Lau +4 more

A Raf-independent Epidermal Growth Factor Receptor Autocrine Loop Is Necessary for Ras Transformation of Rat Intestinal Epithelial Cells

UNC Libraries(2021)10.17615/atzr-9x17

N/A

0DataRank · unranked

0 citations

Ramona Graves‐Deal, Sean Oldham, Robert J. Coffey, Nywana Sizemore, Channing J. Der +1 more

Interaction of lncRNA MIR100HG with hnRNPA2B1 facilitates m6A-dependent stabilization of TCF7L2 mRNA and colorectal cancer progression

Molecular Cancer(2022)10.1186/s12943-022-01555-3

N/A

0DataRank · unranked

193 citations

Danxiu Li, Lina Sun, Hongqiang Qin, Ahui Fan, Lingnan Meng +22 more

Human Colon Cancer–Derived Clostridioides difficile Strains Drive Colonic Tumorigenesis in Mice

Cancer Discovery(2022)10.1158/2159-8290.cd-21-1273

N/A

0DataRank · unranked

139 citations

Jie Chen, Nicholas O. Markham, Reece J. Knippel, Jada C. Domingue, Ada Tam +26 more

MIRIAM: A machine and deep learning single‐cell segmentation and quantification pipeline for multi‐dimensional tissue images

Cytometry Part A(2022)10.1002/cyto.a.24541

N/A

0DataRank · unranked

32 citations

Justin Shao, Samuel T. Ellis, Cody N. Heiser, Joseph T. Roland, Mary C. Macedonia +5 more

Phase 2 of extracellular RNA communication consortium charts next-generation approaches for extracellular RNA research

iScience(2022)10.1016/j.isci.2022.104653

N/A

0DataRank · unranked

31 citations

Jennifer Jones, Roger P. Alexander, Eric Alsop, Ji Yeong An, Mohammad H. Asghari +91 more

Electrodeposited magnetic nanoporous membrane for high-yield and high-throughput immunocapture of extracellular vesicles and lipoproteins

Communications Biology(2022)10.1038/s42003-022-04321-9

N/A

0DataRank · unranked

12 citations

Xiaoye Huo, Yini Zhu, James N. Higginbotham, Zheng Cao, Xin Lü +7 more

Electrodeposited Magnetic Nanoporous Membrane (MNM) with a Multi-Edge Superparamagnetic Heterogeneous Wedge Junction for High-Yield and High-Throughput Immunocapture of Specific Extracellular Vesicles and Lipoproteins

Research Square(2022)10.21203/rs.3.rs-1448269/v1

N/A

0DataRank · unranked

1 citations

Xiaoye Huo, Yini Zhu, James N. Higginbotham, Xin Lü, Jeffrey L. Franklin +6 more

Electrodeposited Magnetic Nanoporous Membrane (MNM) with a Multi-Edge Superparamagnetic Heterogeneous Wedge Junction for High-Yield and High-Throughput Immunocapture of Specific Extracellular Vesicles and Lipoproteins

Research Square(2022)10.21203/rs.3.rs-1448269/v2

N/A

0DataRank · unranked

0 citations

Xiaoye Huo, Yini Zhu, James Higginbotham, Xin Lu, Jeffrey L. Franklin +6 more

Bulk and Mosaic Deletions of Egfr Reveal Regionally Defined Gliogenesis in the Developing Mouse Forebrain

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.10.519926

N/A

0DataRank · unranked

0 citations

Guanxi Xiao, Caroline A. Johnson, Yuheng Cai, Zachary K. Horowitz, Christine Mennicke +8 more

Anapole-Assisted Low-Power Optical Trapping of Nanoscale Extracellular Vesicles and Particles

Nano Letters(2023)10.1021/acs.nanolett.3c02014

N/A

0DataRank · unranked

30 citations

Chuchuan Hong, Oleg Tutanov, Clark Massick, Mark Castleberry, Qin Zhang +7 more

Exosomes, microvesicles, and other extracellular vesicles—a Keystone Symposia report

Annals of the New York Academy of Sciences(2023)10.1111/nyas.14974

N/A

0DataRank · unranked

21 citations

Kenneth W. Witwer, Robert J. Coffey, Aleksandar Milosavljevic, Ariana von Lersner, Lizandra Jimenez +27 more

Evidence for lung barrier regeneration by differentiation prior to binucleated and stem cell division

The Journal of Cell Biology(2023)10.1083/jcb.202212088

N/A

0DataRank · unranked

8 citations

Nicholas H. Juul, Andres Andalon, Hiroki Taenaka, Robert J. Coffey, Michael A. Matthay +2 more

Dynamic tuft cell expansion during gastric metaplasia and dysplasia

The Journal of Pathology Clinical Research(2023)10.1002/cjp2.352

N/A

0DataRank · unranked

8 citations

Hyesung Kim, Su‐Hyung Lee, Yoonkyung Won, Izumi Kaji, Robert J. Coffey +3 more

Bulk and mosaic deletions of Egfr reveal regionally defined gliogenesis in the developing mouse forebrain

iScience(2023)10.1016/j.isci.2023.106242

N/A

0DataRank · unranked

14 citations

Guanxi Xiao, Caroline A. Johnson, Yuheng Cai, Zachary K. Horowitz, Christine Mennicke +8 more

Development of Pluoronic nanoparticles of fluorocoxib A for endoscopic fluorescence imaging of colonic adenomas

Journal of Biomedical Optics(2023)10.1117/1.jbo.28.4.040501

N/A

0DataRank · unranked

4 citations

Hiroaki Niitsu, Robert J. Coffey, Lawrence J. Marnett, Md. Jashim Uddin

Data from Molecular Imaging of Therapeutic Response to Epidermal Growth Factor Receptor Blockade in Colorectal Cancer

(2023)10.1158/1078-0432.c.6517170

Top 100%

0DataRank

Top 100%0 citations

Nipun B. Merchant, A. Coe Foutch, John Virostko, Shelby K. Wyatt, Chirayu Shah +14 more

Detection of EGFR and its Activity State in Plasma CD63-EVs from Glioblastoma Patients: Rapid Profiling using an Anion Exchange Membrane Sensor

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.16.562628

N/A

0DataRank · unranked

0 citations

Sonu Kumar, Jeffrey L. Franklin, James N. Higginbotham, Andrew M. Scott, Hui Gan +4 more

Investigation of Novel Urinary Biomarkers in Hepatocellular Carcinoma Risk in a Predominantly African American Population: A Case-Control Study

Gastrointestinal Tumors(2023)10.1159/000538131

N/A

0DataRank · unranked

0 citations

Xijing Han, Lei Fan, Harvey J. Murff, Robert J. Coffey, Ginger L. Milne +3 more

Integration of lipidomics with targeted, single cell, and spatial transcriptomics defines an unresolved pro-inflammatory state in colon cancer

Gut(2024)10.1136/gutjnl-2024-332535

N/A

0DataRank · unranked

39 citations

Michelle Maurin, Jetsen A. Rodriguez-Silva, Gunjan Upadhyay, Ashley Alden, Siddabasave Gowda B. Gowda +24 more

An anion exchange membrane sensor detects EGFR and its activity state in plasma CD63 extracellular vesicles from patients with glioblastoma

Communications Biology(2024)10.1038/s42003-024-06385-1

N/A

0DataRank · unranked

18 citations

Sonu Kumar, Jeffrey L. Franklin, James N. Higginbotham, Andrew M. Scott, Hui Gan +4 more

Inhibition of autocrine HGF maturation overcomes cetuximab resistance in colorectal cancer

Cellular and Molecular Life Sciences(2024)10.1007/s00018-023-05071-5

N/A

0DataRank · unranked

15 citations

Ramona Graves‐Deal, Zheng Cao, Galina Bogatcheva, Marisol Ramirez, Sarah Harmych +13 more

EVPsort: An Atlas of Small ncRNA Profiling and Sorting in Extracellular Vesicles and Particles

Journal of Molecular Biology(2024)10.1016/j.jmb.2024.168571

N/A

0DataRank · unranked

2 citations

Jing Wang, Robert J. Coffey, James G. Patton, Alissa M. Weaver, Yu Shyr +2 more

Consensus tissue domain detection in spatial omics data using multiplex image labeling with regional morphology (MILWRM)

Communications Biology(2024)10.1038/s42003-024-06281-8

N/A

0DataRank · unranked

2 citations

Cody N. Heiser, Eliot T. McKinley, Lissa Ventura‐Antunes, Coleman R. Harris, Joseph T. Roland +11 more

Blebbisomes are large, organelle-rich extracellular vesicles with cell-like properties

Nature Cell Biology(2025)10.1038/s41556-025-01621-0

N/A

0DataRank · unranked

65 citations

Zachary Sanchez, Noah M. Kelley, James B. Hayes, Jessica Ambroise, Emma Koory +12 more

Heterogeneity of Extracellular Vesicles and Non‐Vesicular Nanoparticles in Glioblastoma

Journal of Extracellular Vesicles(2025)10.1002/jev2.70168

N/A

0DataRank · unranked

6 citations

Joao A. Paulo, Piyan Zhang, Xinyue Liu, Alya Nguyen, Yuanhua Cheng +14 more

Benchmarking Spatial Co-Localization Methods for Single-Cell Multiplex Imaging Data with Applications to High-Grade Serous Ovarian and Triple Negative Breast Cancer

Statistics and data science in imaging.(2025)10.1080/29979676.2024.2437947

N/A

0DataRank · unranked

5 citations

Ishaan Gadiyar, Bryan R. Helm, Coleman R. Harris, Simon Vandekar, Lauren C. Peres +5 more

A comprehensive analysis of supermere, exomere, and extracellular vesicle isolation and cargo in colorectal cancer

Cell Reports(2025)10.1016/j.celrep.2025.116287

N/A

0DataRank · unranked

5 citations

Clark Massick, Marisol Ramirez, James N. Higginbotham, Lizandra Jimenez, Mark Castleberry +19 more

3D collagen high-throughput screen identifies drugs that induce epithelial polarity and enhance chemotherapy response in colorectal cancer

Communications Biology(2025)10.1038/s42003-025-08699-0

N/A

0DataRank · unranked

3 citations

Thomas P. Hasaka, Chelsie K. Sievers, Seung Woo Kang, Marisol Ramirez, Vivian Truong Jones +9 more

Yes-associated protein plays oncogenic roles in human sporadic colorectal adenomas

Carcinogenesis(2025)10.1093/carcin/bgaf007

N/A

0DataRank · unranked

2 citations

Xingyi Guo, M. Kay Washington, Jiajun Shi, Reid M. Ness, Qi Liu +9 more

RAB25 modulates pit cell commitment by coordinating transforming growth factor-alpha secretion from gastric epithelial cells

Cell Death and Disease(2025)10.1038/s41419-025-08316-2

N/A

0DataRank · unranked

1 citations

Yura Lee, Chanyang Uhm, S. HWANG, Sumin Hur, Minsoo Noh +4 more

Surface Markers on Supermeres Outperform Extracellular Vesicles in Cancer Diagnosis

medRxiv(2025)10.1101/2025.09.30.25337017

N/A

0DataRank · unranked

0 citations

John Alex Sinclair, Tiger Shi, Gaeun Kim, Runyao Zhu, Grace Gasper +12 more

Angiotensin-converting Enzyme 2–containing Small Extracellular Vesicles and Exomeres Bind the Severe Acute Respiratory Syndrome Coronavirus 2 Spike Protein

Gastroenterology(2020)10.1053/j.gastro.2020.09.042

N/A

0DataRank · unranked

56 citations

Dennis K. Jeppesen, James N. Higginbotham, Jeffrey L. Franklin, James E. Crowe, Robert J. Coffey +1 more

Combined blockade of EGFR and glutamine metabolism in preclinical models of colorectal cancer

Translational Oncology(2020)10.1016/j.tranon.2020.100828

N/A

0DataRank · unranked

48 citations

Ling Geng, Ping Zhao, Allie Fu, M. Schulte, Ramona Graves‐Deal +5 more

Molecular Imaging of Inflammation in Osteoarthritis Using a Water-Soluble Fluorocoxib

ACS Medicinal Chemistry Letters(2020)10.1021/acsmedchemlett.9b00512

N/A

0DataRank · unranked

7 citations

Anoop Vemulapalli, Hiroaki Niitsu, Brenda C. Crews, Connor G. Oltman, Philip J. Kingsley +9 more

Rab13 regulates sEV secretion in mutant KRAS colorectal cancer cells

Scientific Reports(2020)10.1038/s41598-020-72503-8

N/A

0DataRank · unranked

45 citations

Jessica J. Abner, Jeffrey L. Franklin, Dennis K. Jeppesen, Robert J. Coffey, James G. Patton +1 more

Elevating EGFR-MAPK program by a nonconventional Cdc42 enhances intestinal epithelial survival and regeneration

JCI Insight(2020)10.1172/jci.insight.135923

N/A

0DataRank · unranked

32 citations

Sheila Bandyopadhyay, Leandro P. Araújo, Kevin Tong, Juan Flores, Daniel Laubitz +14 more

Robert J. Coffey

Indexed papers

Top data-sharing exemplar

Papers