🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Kun Fang

Medical College of Wisconsin

ORCID: 0000-0002-2569-8543

Also affiliated with Cancer Genetics (United States), Columbia University

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 12 papers. Top paper: “Integrated single-cell analysis reveals distinct epigenetic-regulated cancer cell states and a heterogeneity-guided core signature in tamoxifen-resistant breast cancer”.

Integrated single-cell analysis reveals distinct epigenetic-regulated cancer cell states and a heterogeneity-guided core signature in tamoxifen-resistant breast cancer

Genome Medicine(2024)10.1186/s13073-024-01407-3
N/A
0.678DataRank · unranked
29 citations

Aigbe G. Ohihoin, Tianxiang Liu, Lavanya Choppavarapu, Bakhtiyor Nosirov, Qianben Wang +5 more

The 3D genomic landscape of differential response to EGFR/HER2 inhibition in endocrine-resistant breast cancer cells

Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms(2020)10.1016/j.bbagrm.2020.194631
N/A
0.489DataRank · unranked
25 citations

Lavanya Choppavarapu, Kun Fang, Alireza Sahaf Naeini, Bakhtiyor Nosirov, Jingwei Li +9 more

Integration of scHi-C and scRNA-seq data defines distinct 3D-regulated and biological-context dependent cell subpopulations

Nature Communications(2024)10.1038/s41467-024-52440-0
N/A
0.379DataRank · unranked
9 citations

Li Tian, Lavanya Choppavarapu, Kun Fang, Shili Lin, Victor X. Jin +1 more

Integrative analysis identifies the atypical repressor E2F8 as a targetable transcriptional activator driving lethal prostate cancer

Oncogene(2025)10.1038/s41388-024-03239-2
N/A
0.292DataRank · unranked
6 citations

Kexin Li, Zhong Chen, Zhifen Cui, William Hankey, Kun Fang +6 more

Mapping nucleosome and chromatin architectures: A survey of computational methods

Computational and Structural Biotechnology Journal(2022)10.1016/j.csbj.2022.07.037
N/A
0DataRank · unranked
8 citations

Junbai Wang, Lu Liu, Victor X. Jin, Kun Fang

NucHMM: a method for quantitative modeling of nucleosome organization identifying functional nucleosome states distinctly associated with splicing potentiality

Genome biology(2021)10.1186/s13059-021-02465-1
N/A
0DataRank · unranked
7 citations

Tianbao Li, Yufei Huang, Victor X. Jin, Kun Fang

Hi-C profiling of cancer spheroids identifies 3D-growth-specific chromatin interactions in breast cancer endocrine resistance

Clinical Epigenetics(2021)10.1186/s13148-021-01167-6
N/A
0DataRank · unranked
29 citations

Kun Fang, Lavanya Choppavarapu, Ke Yang, Yini Yang, Junbai Wang +4 more

Dynamic nucleosome landscape elicits a noncanonical GATA2 pioneer model

Nature Communications(2022)10.1038/s41467-022-30960-x
N/A
0DataRank · unranked
5 citations

Qi Liu, Zhong Chen, Kun Fang, Furong Huang, Xueqi Fu +3 more

Hi-C profiling in tissues reveals 3D chromatin-regulated breast tumor heterogeneity informing a looping-mediated therapeutic avenue

Cell Reports(2025)10.1016/j.celrep.2025.115450
N/A
0DataRank · unranked
8 citations

Kun Fang, Tianxiang Liu, Aigbe G. Ohihoin, Victor X. Jin, Lavanya Choppavarapu

Integrated analysis of differential intra-chromosomal community interactions: A study of breast cancer

Artificial Intelligence in Medicine(2025)10.1016/j.artmed.2025.103180
N/A
0DataRank · unranked
2 citations

Kun Fang, Gege Liu, Magnar Bjørås, Victor X. Jin, Junbai Wang +1 more

Nuc3DMap delineates finer nucleosome-based three-dimensional chromatin architecture

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.03.647017
N/A
0DataRank · unranked
0 citations

Lavanya Choppavarapu, Tianxiang Liu, Philip A. Knight, Victor X. Jin, Kun Fang

Hi-C profiling in tissues reveals 3D chromatin-regulated breast tumor heterogeneity and tumor-specific looping-mediated biological pathways

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.13.584872
N/A
0DataRank · unranked
0 citations

Kun Fang, Tianxiang Liu, Victor X. Jin, Lavanya Choppavarapu