Stephanie Halene

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 51 papers. Top paper: “High-Spatial-Resolution Multi-Omics Sequencing via Deterministic Barcoding in Tissue”.

High-Spatial-Resolution Multi-Omics Sequencing via Deterministic Barcoding in Tissue

Cell(2020)10.1016/j.cell.2020.10.026

N/A

10.0DataRank · unranked

960 citations

Mingyu Yang, Yanxiang Deng, Graham Su, Archibald Enninful, Cindy C. Guo +11 more

A Phase 2 Randomized, Double-Blind, Placebo-controlled Trial of Oral Camostat Mesylate for Early Treatment of COVID-19 Outpatients Showed Shorter Illness Course and Attenuation of Loss of Smell and Taste

medRxiv(2022)10.1101/2022.01.28.22270035

N/A

1.4DataRank · unranked

27 citations

Anne Spichler-Moffarah, Ole S. Søgaard, Denise Esserman, James Dziura, Lisa Danzig +19 more

Endotheliopathy in COVID-19-associated coagulopathy: evidence from a single-centre, cross-sectional study

The Lancet Haematology(2020)10.1016/s2352-3026(20)30216-7

N/A

1.1DataRank · unranked

1141 citations

Alexander B. Pine, Matthew L. Meizlish, C‐Hong Chang, Hanming Zhang, Parveen Bahel +18 more

Finding consistency in classifications of myeloid neoplasms: a perspective on behalf of the International Workshop for Myelodysplastic Syndromes

Leukemia(2022)10.1038/s41375-022-01724-9

N/A

0.926DataRank · unranked

28 citations

Jan Philipp Bewersdorf, Rena Buckstein, Mikkael A. Sekeres, David P. Steensma, Uwe Platzbecker +44 more

Spatial profiling of chromatin accessibility in mouse and human tissues

Nature(2022)10.1038/s41586-022-05094-1

N/A

0.891DataRank · unranked

380 citations

Marek Bartošovič, Sai Ma, Di Zhang, Petra Kukanja, Yang Xiao +14 more

A neutrophil activation signature predicts critical illness and mortality in COVID-19

Blood Advances(2021)10.1182/bloodadvances.2020003568

N/A

0.879DataRank · unranked

350 citations

Alexander B. Pine, Jason Bishai, George Goshua, Emily R. Nadelmann, Michael Simonov +25 more

A multicenter phase Ib trial of the histone deacetylase inhibitor entinostat in combination with pembrolizumab in patients with myelodysplastic syndromes/neoplasms or acute myeloid leukemia refractory to hypomethylating agents

Annals of Hematology(2023)10.1007/s00277-023-05552-4

N/A

0.726DataRank · unranked

23 citations

Rory M. Shallis, Elad Sharon, Silvia Park, Rahul Ramaswamy, Caroline E. Roe +18 more

Precision analysis of mutant U2AF1 activity reveals deployment of stress granules in myeloid malignancies

Molecular Cell(2022)10.1016/j.molcel.2022.02.025

N/A

0.665DataRank · unranked

83 citations

Poorval Joshi, Joshua T. Zimmer, Torben Hunck, Yimeng Gao, Mark D. Lessard +18 more

Clonal hematopoiesis of indeterminate potential is associated with increased risk of immune checkpoint inhibitor myocarditis in a prospective study of a cardio-oncology cohort

Cardio-Oncology(2024)10.1186/s40959-024-00289-z

N/A

0.566DataRank · unranked

9 citations

Jaiveer Singh, Carlos Matute-Martínez, Nathan W. Chen, Ana Ferrigno Guajardo, Derrick T. Lin +13 more

An agenda to advance research in myelodysplastic syndromes: a TOP 10 priority list from the first international workshop in MDS

Blood Advances(2022)10.1182/bloodadvances.2022008747

N/A

0.525DataRank · unranked

11 citations

Omar Abdel-Wahab, Andrew H. Wei, Michael R. Savona, Mina L. Xu, Zhuoer Xie +45 more

The Role of RNA Epigenetic Modification in Normal and Malignant Hematopoiesis

Current Stem Cell Reports(2020)10.1007/s40778-020-00178-y

N/A

0.425DataRank · unranked

16 citations

Yimeng Gao, Chengyang Liu, Stephanie Halene, Radovan Vasic

Spatial-CITE-seq: spatially resolved high-plex protein and whole transcriptome co-mapping

Research Square(2022)10.21203/rs.3.rs-1499315/v1

N/A

0.406DataRank · unranked

14 citations

Yang Liu, Marcello DiStasio, Graham Su, Hiromitsu Asashima, Archibald Enninful +10 more

Clonal Hematopoiesis Is Associated With Cardiomyopathy During Solid Tumor Therapy

JACC CardioOncology(2024)10.1016/j.jaccao.2024.05.013

N/A

0.396DataRank · unranked

13 citations

Rachel Jaber Chehayeb, Carlos Matute-Martínez, Nathan W. Chen, Ritujith Jayakrishnan, Anthos Christofides +7 more

RBM15-MKL1 fusion protein promotes leukemia via m6A methylation and Wnt pathway activation

Blood(2025)10.1182/blood.2024027712

N/A

0.360DataRank · unranked

10 citations

Giulia Biancon, Manyi Wei, Christian Ramirez, Irene Moratti, Andreas P. Pintado-Urbanc +10 more

Natural killer cells’ functional impairment drives the immune escape of pre-malignant clones in early-stage myelodysplastic syndromes

Nature Communications(2025)10.1038/s41467-025-58662-0

N/A

0.321DataRank · unranked

7 citations

Irene Gañán‐Gómez, Bijender Kumar, Natthakan Thongon, Feiyang Ma, Kelly S. Chien +35 more

Dissecting the stress granule RNA world: dynamics, strategies, and data

RNA(2025)10.1261/rna.080409.125

N/A

0.312DataRank · unranked

7 citations

Emma Busarello, Matthew Cheng, Stephanie Halene, Toma Tebaldi, Giulia Biancon

Microfluidic Immuno‐Serolomic Assay Reveals Systems Level Association with COVID‐19 Pathology and Vaccine Protection

Small Methods(2023)10.1002/smtd.202300594

N/A

0.312DataRank · unranked

7 citations

Giulia Biancon, Zhiliang Bai, Jennifer VanOudenhove, Yuxin Liu, Shalin Kothari +15 more

Spatial-ATAC-seq: spatially resolved chromatin accessibility profiling of tissues at genome scale and cellular level

Research Square(2021)10.21203/rs.3.rs-593462/v1

N/A

0.269DataRank · unranked

5 citations

Yanxiang Deng, Marek Bartošovič, Sai Ma, Di Zhang, Yang Liu +7 more

Cell Marker Accordion: interpretable single-cell and spatial omics annotation in health and disease

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.08.584053

N/A

0.269DataRank · unranked

5 citations

Giulia Biancon, Ilaria Cimignolo, Fabio Lauria, Zuhairia Ibnat, Christian Ramirez +17 more

An in vivo screen identifies NAT10 as a master regulator of brain metastasis

Science Advances(2025)10.1126/sciadv.ads6021

N/A

0.269DataRank · unranked

5 citations

Peng Xu, Wesley L. Cai, Huacui Chen, Emily Wingrove, Xiaojian Shi +17 more

Deconvolution of in vivo protein-RNA contacts using fractionated eCLIP-seq

STAR Protocols(2022)10.1016/j.xpro.2022.101823

N/A

0.241DataRank · unranked

4 citations

Emma Busarello, Poorval Joshi, Bluma J. Lesch, Stephanie Halene, Toma Tebaldi +1 more

Selective inhibition of MCL1 overcomes venetoclax resistance in a murine model of myelodysplastic syndromes

Haematologica(2022)10.3324/haematol.2022.280631

N/A

0DataRank · unranked

13 citations

Yuanbin Song, Maria P. Arrate, Rana Gbyli, Matthew T. Villaume, Brianna N. Smith +5 more

Recruited monocytes/macrophages drive pulmonary neutrophilic inflammation and irreversible lung tissue remodeling in cystic fibrosis

Cell Reports(2022)10.1016/j.celrep.2022.111797

N/A

0DataRank · unranked

68 citations

Ee-Chun Cheng, Caterina Di Pietro, Toma Tebaldi, Giulia Biancon, Caroline J. Zeiss +11 more

Multi-omics profiling of U2AF1 mutants dissects pathogenic mechanisms affecting RNA granules in myeloid malignancies

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.22.441020

N/A

0DataRank · unranked

3 citations

Poorval Joshi, Joshua T. Zimmer, Torben Hunck, Yimeng Gao, Mark D. Lessard +18 more

Spatial-CITE-seq: spatially resolved high-plex protein and whole transcriptome co-mapping

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.01.486788

N/A

0DataRank · unranked

21 citations

Marcello DiStasio, Graham Su, Hiromitsu Asashima, Archibald Enninful, Xiaoyu Qin +10 more

Widespread association of the Argonaute protein AGO2 with meiotic chromatin suggests a distinct nuclear function in mammalian male reproduction

Genome Research(2022)10.1101/gr.276578.122

N/A

0DataRank · unranked

18 citations

Benjamin William Walters, Haixin Li, Huafeng Wang, Giulia Biancon, Toma Tebaldi +8 more

Spatial-ATAC-seq: spatially resolved chromatin accessibility profiling of tissues at genome scale and cellular level

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.06.447244

N/A

0DataRank · unranked

24 citations

Marek Bartošovič, Sai Ma, Di Zhang, Yang Liu, Xiaoyu Qin +7 more

Human neutrophil development and functionality are enabled in a humanized mouse model

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.25.481352

N/A

0DataRank · unranked

4 citations

Esen Sefik, John Astle, Angel G. Solis, Hasan Halit Öz, Ruaidhrí Jackson +5 more

High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq

Nature Biotechnology(2023)10.1038/s41587-023-01676-0

N/A

0DataRank · unranked

379 citations

Marcello DiStasio, Graham Su, Hiromitsu Asashima, Archibald Enninful, Xiaoyu Qin +12 more

ALKBH5 modulates hematopoietic stem and progenitor cell energy metabolism through m6A modification-mediated RNA stability control

Cell Reports(2023)10.1016/j.celrep.2023.113163

N/A

0DataRank · unranked

43 citations

Joshua T. Zimmer, Radovan Vasic, Chengyang Liu, Rana Gbyli, Shu-Jian Zheng +16 more

Classification, risk stratification and response assessment in myelodysplastic syndromes/neoplasms (MDS): A state-of-the-art report on behalf of the International Consortium for MDS (icMDS)

Blood Reviews(2023)10.1016/j.blre.2023.101128

N/A

0DataRank · unranked

31 citations

Jan Philipp Bewersdorf, Zhuoer Xie, Matteo Giovanni Della Porta, Rami S. Komrokji, Mina L. Xu +43 more

Challenges in the Evaluation and Management of Toxicities Arising From Immune Checkpoint Inhibitor Therapy for Patients With Myeloid Malignancies

Clinical Lymphoma Myeloma & Leukemia(2021)10.1016/j.clml.2021.01.003

N/A

0DataRank · unranked

1 citations

Jan Philipp Bewersdorf, David M. Swoboda, Wei Wei, Lohith Gowda, Thomas Prébet +10 more

Current landscape of translational and clinical research in myelodysplastic syndromes/neoplasms (MDS): Proceedings from the 1st International Workshop on MDS (iwMDS) Of the International Consortium for MDS (icMDS)

Blood Reviews(2023)10.1016/j.blre.2023.101072

N/A

0DataRank · unranked

18 citations

Zhuoer Xie, Rafael Bejar, Uma Borate, Jacqueline Boultwood, Andrew M. Brunner +37 more

PD-1H/VISTA mediates immune evasion in acute myeloid leukemia

Journal of Clinical Investigation(2023)10.1172/jci164325

N/A

0DataRank · unranked

18 citations

Xue Han, Qianni Hu, Esten N. Vandsemb, Carly M. Fielder, Junshik Hong +21 more

Transcriptome-wide quantification of double-stranded RNAs in live mouse tissues by dsRIP-Seq

STAR Protocols(2021)10.1016/j.xpro.2021.100366

N/A

0DataRank · unranked

23 citations

Shirui Chen, Stephanie Halene, Toma Tebaldi, Yimeng Gao

A neutrophil activation signature predicts critical illness and mortality in COVID-19

medRxiv(2020)10.1101/2020.09.01.20183897

N/A

0DataRank · unranked

48 citations

Alexander B. Pine, Jason Bishai, George Goshua, Emily R. Nadelmann, Michael Simonov +25 more

Contemporary Approach to the Diagnosis and Classification of Myelodysplastic Neoplasms/Syndromes—Recommendations From the International Consortium for Myelodysplastic Neoplasms/Syndromes (MDS [icMDS])

Modern Pathology(2024)10.1016/j.modpat.2024.100615

N/A

0DataRank · unranked

12 citations

Savanah D. Gisriel, Amer M. Zeidan, John M. Bennett, Rafael Bejar, Jan Philipp Bewersdorf +48 more

Cyclosporine enhances the sensitivity to lenalidomide in MDS/AML in vitro

Experimental Hematology(2020)10.1016/j.exphem.2020.05.001

N/A

0DataRank · unranked

14 citations

Aixia Dou, Saran Feng, Ashley Roman-Rivera, Caleb Hawkins, Lauren Lawley +7 more

The human CD47 checkpoint is targeted by an immunosuppressive Aedes aegypti salivary factor to enhance arboviral skin infectivity

Science Immunology(2024)10.1126/sciimmunol.adk9872

N/A

0DataRank · unranked

6 citations

John D. Huck, Allen T. Esterly, Verónica Azcutia, Connor Rosen, Rolando García-Milian +14 more

GPR68 supports AML cells through the calcium/calcineurin pro-survival pathway and confers chemoresistance by mediating glucose metabolic symbiosis

Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease(2024)10.1016/j.bbadis.2024.167565

N/A

0DataRank · unranked

6 citations

Caleb Hawkins, Lauren Lawley, Tra Mi Phan, Isaac Park, Nicole Joven +9 more

Splicing the Difference: Harnessing the Complexity of the Transcriptome in Hematopoiesis

Experimental Hematology(2024)10.1016/j.exphem.2024.104655

N/A

0DataRank · unranked

1 citations

Stephanie Halene, Hannah M. Maul-Newby

Thrombocytopathy and endotheliopathy: crucial contributors to COVID-19 thromboinflammation

Nature Reviews Cardiology(2020)10.1038/s41569-020-00469-1

N/A

0DataRank · unranked

432 citations

Tarun Tyagi, Kanika Jain, Vivian W. Gu, Seung Hee Lee, Jonathan M. Hwa +8 more

Unique epigenomic signatures identify biologically significant subtypes of MDS and predict response to azacitidine

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.23.650336

N/A

0DataRank · unranked

0 citations

Miguel Torres‐Martín, Masataka Taguchi, Alice Brogi, Irene Casalin, Eleonora Ceneri +12 more

Circulating markers of angiogenesis and endotheliopathy in COVID‐19

Pulmonary Circulation(2020)10.1177/2045894020966547

N/A

0DataRank · unranked

155 citations

Matthew L. Meizlish, George Goshua, C‐Hong Chang, Hanming Zhang, Jason Bishai +13 more

m6A Modification Prevents Formation of Endogenous Double-Stranded RNAs and Deleterious Innate Immune Responses during Hematopoietic Development

Immunity(2020)10.1016/j.immuni.2020.05.003

N/A

0DataRank · unranked

183 citations

Radovan Vasic, Yuanbin Song, Rhea W. Teng, Chengyang Liu, Rana Gbyli +20 more

Cell Marker Accordion: interpretable single-cell and spatial omics annotation in health and disease

Nature Communications(2025)10.1038/s41467-025-60900-4

N/A

0DataRank · unranked

6 citations

Giulia Biancon, Ilaria Cimignolo, Fabio Lauria, Zuhairia Ibnat, Christian Ramirez +17 more

Impact of memory T cells on SARS-CoV-2 vaccine response in hematopoietic stem cell transplant

PLoS ONE(2025)10.1371/journal.pone.0320744

N/A

0DataRank · unranked

0 citations

Yuxin Liu, Raman Nelakanti, Dongjoo Kim, Emma Busarello, Natalia Tijaro Ovalle +15 more

Clonal Hematopoiesis Risk Score (CHRS) Evaluation as a Prognostic Marker for Death in Cardio-Oncology Cohort

JACC Advances(2025)10.1016/j.jacadv.2025.102290

N/A

0DataRank · unranked

1 citations

Rachel Jaber Chehayeb, Yunju Im, Irvin Yi, Talal El Zarif, Ana Ferrigno Guajardo +5 more

Pre-mRNA splicing factor U2AF2 recognizes distinct conformations of nucleotide variants at the center of the pre-mRNA splice site signal

Nucleic Acids Research(2022)10.1093/nar/gkac287

N/A

0DataRank · unranked

47 citations

Debanjana Maji, Giulia Biancon, Anees Mohammed Keedakkatt Puthenpeedikakkal, Chapin E. Cavender, Toma Tebaldi +5 more

Mission, Organization, and Future Direction of the Serological Sciences Network for COVID-19 (SeroNet) Epidemiologic Cohort Studies

Open Forum Infectious Diseases(2022)10.1093/ofid/ofac171

N/A

0DataRank · unranked

15 citations

Fred R. Hirsch, Lawrence H. Kushi, Wendy N. Nembhard, James M. Crawford, Nicholas J. Mantis +92 more

The Coming of Age of Preclinical Models of MDS

Frontiers in Oncology(2022)10.3389/fonc.2022.815037

N/A

0DataRank · unranked

19 citations

Patric Teodorescu, Stephanie Halene, Gabriel Ghiaur, Wei Liu