Hatice U. Osmanbeyoglu

MedicineBiochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 19 papers. Top paper: “Isolated BAP1 Genomic Alteration in Malignant Pleural Mesothelioma Predicts Distinct Immunogenicity with Implications for Immunotherapeutic Response”.

Isolated BAP1 Genomic Alteration in Malignant Pleural Mesothelioma Predicts Distinct Immunogenicity with Implications for Immunotherapeutic Response

Cancers(2022)10.3390/cancers14225626

N/A

0.593DataRank · unranked

13 citations

Drake Palmer, April Sagan, Eleonora Sementino, Michael J. Becich, Joseph R. Testa +1 more

Recurrent Human Papillomavirus–Related Head and Neck Cancer Undergoes Metabolic Reprogramming and Is Driven by Oxidative Phosphorylation

Clinical Cancer Research(2021)10.1158/1078-0432.ccr-20-4789

N/A

0DataRank · unranked

33 citations

R. Alex Harbison, Daniel L. Faden, Mark Kubik, Drake Palmer, Qing Zhang +5 more

SPaRTAN, a computational framework for linking cell-surface receptors to transcriptional regulators

Nucleic Acids Research(2021)10.1093/nar/gkab745

N/A

0DataRank · unranked

16 citations

Ashwin Somasundaram, Zengbiao Qi, Douglas J. Hartman, Harinder Singh, Hatice U. Osmanbeyoglu +1 more

Interpretable deep learning for chromatin-informed inference of transcriptional programs driven by somatic alterations across cancers

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.07.459263

N/A

0DataRank · unranked

2 citations

Xiaojun Ma, Drake Palmer, Russell Schwartz, Xinghua Lu, Hatice U. Osmanbeyoglu +1 more

Thymidine rescues ATR kinase inhibitor-induced deoxyuridine contamination in genomic DNA, cell death, and interferon-α/β expression

Cell Reports(2022)10.1016/j.celrep.2022.111371

N/A

0DataRank · unranked

25 citations

Frank P. Vendetti, Andrew J. Cipriano, Pinakin Pandya, Joshua J. Deppas, Tatiana N. Moiseeva +12 more

Interpretable deep learning for chromatin-informed inference of transcriptional programs driven by somatic alterations across cancers

Nucleic Acids Research(2022)10.1093/nar/gkac881

N/A

0DataRank · unranked

10 citations

Xiaojun Ma, Drake Palmer, Russell Schwartz, Xinghua Lu, Hatice U. Osmanbeyoglu +1 more

Chromatin accessibility landscape and active transcription factors in primary human invasive lobular and ductal breast carcinomas

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.08.487589

N/A

0DataRank · unranked

2 citations

Hatice U. Osmanbeyoglu, Sanghoon Lee

Thymidine rescues ATR kinase inhibition induced deoxyuridine contamination in genomic DNA, cell death, and Type 1 interferon expression

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.24.481821

N/A

0DataRank · unranked

1 citations

Frank P. Vendetti, Andrew J. Cipriano, Pinakin Pandya, Joshua J. Deppas, Tatiana N. Moiseeva +12 more

Immune landscape in invasive ductal and lobular breast cancer reveals a divergent macrophage-driven microenvironment

Nature Cancer(2023)10.1038/s43018-023-00527-w

N/A

0DataRank · unranked

76 citations

Jian Cui, Jian Zou, Carly Cardello, Anthony R. Cillo, Mostofa Rafid Uddin +12 more

Vascular endothelial profilin-1 drives a protumorigenic tumor microenvironment and tumor progression in renal cancer

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.105044

N/A

0DataRank · unranked

16 citations

Andrew Daoud, Abigail Allen, Marion Joy, April Sagan, Sanghoon Lee +6 more

Spatial landscape of malignant pleural and peritoneal mesothelioma tumor immune microenvironment

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.06.556559

N/A

0DataRank · unranked

1 citations

David Lembersky, Elena S. Kim, Tullia C. Bruno, Joseph R. Testa, Hatice U. Osmanbeyoglu +1 more

COVID‐19db linkage maps of cell surface proteins and transcription factors in immune cells

Journal of Medical Virology(2023)10.1002/jmv.28887

N/A

0DataRank · unranked

0 citations

Xiaojun Ma, Shou‐Jiang Gao, Harinder Singh, Hatice U. Osmanbeyoglu, Koushul Ramjattun

Single-cell analysis reveals the stromal dynamics and tumor-specific characteristics in the microenvironment of ovarian cancer

Communications Biology(2024)10.1038/s42003-023-05733-x

N/A

0DataRank · unranked

38 citations

Sandra Cascio, John W. Mellors, Ronald J. Buckanovich, Hatice U. Osmanbeyoglu, Linan Zhang

Cancer-cell derived S100A11 promotes macrophage recruitment in ER+ breast cancer

OncoImmunology(2024)10.1080/2162402x.2024.2429186

N/A

0DataRank · unranked

6 citations

Youngbin Cho, Yiting Li, Ruxuan Li, Angela Wong Lau, Matthew S. Laird +7 more

STAN, a computational framework for inferring spatially informed transcription factor activity

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.26.600782

N/A

0DataRank · unranked

3 citations

April Sagan, Bin Qin, Elena S. Kim, Baoli Hu, Hatice U. Osmanbeyoglu +1 more

Cancer-cell derived S100A11 promotes macrophage recruitment in ER+ breast cancer

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.21.586041

N/A

0DataRank · unranked

2 citations

Youngbin Cho, Yiting Li, Ruxuan Li, Daniel D. Brown, Priscilla F. McAuliffe +5 more

Loss of CFIm activates YAP/TAZ and connects mRNA cleavage and polyadenylation inhibition to BRCAness

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.21.683728

N/A

0DataRank · unranked

0 citations

Jiahui Hou, Abhi Nadendla, Hatice U. Osmanbeyoglu, Hun‐Way Hwang, Madeleine Goldthorpe

Targeting Aurora B kinase prevents and overcomes resistance to EGFR inhibitors in lung cancer by enhancing BIM- and PUMA-mediated apoptosis

Cancer Cell(2021)10.1016/j.ccell.2021.07.006

N/A

0DataRank · unranked

174 citations

Helena A. Yu, Shaoyuan Yang, Song Han, S. Duygu Selçuklu, Kwanghee Kim +15 more

STAN, a computational framework for inferring spatially informed transcription factor activity

Nucleic Acids Research(2025)10.1093/nar/gkaf1473

N/A

0DataRank · unranked

0 citations

April Sagan, Bin Qin, Haoyu Wang, Elena S. Kim, Baoli Hu +2 more