Andreas R. Pfenning

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

19.8Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Integrative analysis of 111 reference human epigenomes

Nature(2015)10.1038/nature14248

Top 1%

10.0DataRank

Top 1%7189 citations

Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen +93 more

Papers

Driven by 38 papers — median percentile 94. Top paper: “Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates”.

Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2010146117

N/A

13.2DataRank · unranked

685 citations

Graham M. Hughes, Kathleen C. Keough, Corrie Painter, Nicole S. Persky, Marco Corbo +14 more

The genome of a songbird

Nature(2010)10.1038/nature08819

N/A

10.5DataRank · unranked

836 citations

David F. Clayton, Hans Ellegren, Arthur P. Arnold, LaDeana W. Hillier, Axel Künstner +77 more

Integrative analysis of 111 reference human epigenomes

Nature(2015)10.1038/nature14248

Top 1%

10.0DataRank

Top 1%7189 citations

Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen +93 more

A comparative genomics multitool for scientific discovery and conservation

Nature(2020)10.1038/s41586-020-2876-6

Top 4%

5.0DataRank

Top 4%447 citations

Aitor Serres, Joel Armstrong, Jeremy Johnson, Voichita D. Marinescu, Eva Murén +43 more

Evolutionary constraint and innovation across hundreds of placental mammals

Science(2023)10.1126/science.abn3943

Top 7%

3.0DataRank

Top 7%271 citations

Irene M. Kaplow, Diane P. Genereux, Michael X. Dong, Graham M. Hughes, Xue Li +78 more

Core and region-enriched networks of behaviorally regulated genes and the singing genome

Science(2014)10.1126/science.1256780

N/A

2.7DataRank · unranked

127 citations

Andreas R. Pfenning, Jason T. Howard, Charles A Blatti, Fang Liu, James M. Ward +11 more

Neurons burdened by DNA double-strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration

Science Advances(2022)10.1126/sciadv.abo4662

N/A

2.3DataRank · unranked

82 citations

Carles B. Adsera, Eloi Schmauch, José Dávila-Velderrain, Matheus B. Victor, Vishnu Dileep +9 more

Relating enhancer genetic variation across mammals to complex phenotypes using machine learning

Science(2023)10.1126/science.abm7993

N/A

2.0DataRank · unranked

90 citations

Alyssa J. Lawler, Daniel E. Schäffer, Chaitanya Srinivasan, Heather H. Sestili, Morgan Wirthlin +82 more

The contribution of historical processes to contemporary extinction risk in placental mammals

Science(2023)10.1126/science.abn5856

N/A

1.9DataRank · unranked

106 citations

Megan A. Supple, Ayshwarya Subramanian, Anish Mudide, Ross Swofford, Aitor Serres‐Armero +87 more

Evolution of the ancestral mammalian karyotype and syntenic regions

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2209139119

Top 12%

1.8DataRank

Top 12%96 citations

Marco Corbo, Kim, Jaebum, Jason Turner-Maier, Marta Farré, Denis M. Larkin +87 more

scAAVengr, a transcriptome-based pipeline for quantitative ranking of engineered AAVs with single-cell resolution

eLife(2021)10.7554/elife.64175

N/A

1.7DataRank · unranked

62 citations

Molly Johnson, Michael Kleyman, Serhan Turunç, Jing He, Sara Jabalameli +14 more

Single nuclei transcriptomics in human and non-human primate striatum in opioid use disorder

Nature Communications(2024)10.1038/s41467-024-45165-7

N/A

1.1DataRank · unranked

53 citations

Madelyn H. Ray, Xiangning Xue, Chen Fu, Robert J. Fenster, Stephen J. Kohut +17 more

Machine learning sequence prioritization for cell type-specific enhancer design

eLife(2022)10.7554/elife.69571

N/A

0.992DataRank · unranked

30 citations

Easwaran Ramamurthy, Ashley R. Brown, Naomi Shin, Yeonju Kim, Noelle Toong +13 more

Conserved epigenomic signals in mice and humans reveal immune basis of Alzheimer’s disease

Nature(2015)10.1038/nature14252

N/A

0.968DataRank · unranked

634 citations

Andreas R. Pfenning, Hansruedi Mathys, Richard Sandstrom, Anshul Kundaje, Li-Huei Tsai +3 more

Loss of epigenetic information as a cause of mammalian aging

Cell(2023)10.1016/j.cell.2022.12.027

N/A

0.967DataRank · unranked

629 citations

Motoshi Hayano, Patrick Griffin, João A. Amorim, Michael S. Bonkowski, John K. Apostolides +59 more

Rate of brain aging and APOE ε4 are synergistic risk factors for Alzheimer’s disease

Life Science Alliance(2019)10.26508/lsa.201900303

N/A

0.750DataRank · unranked

16 citations

Andreas R. Pfenning, Sam S Lee, David A. Bennett, Etienne L Sibille, Sharon L. R. Kardia +3 more

RERconverge Expansion: Using Relative Evolutionary Rates to Study Complex Categorical Trait Evolution

Molecular Biology and Evolution(2024)10.1093/molbev/msae210

N/A

0.454DataRank · unranked

11 citations

Amanda Kowalczyk, Michael Tene, Heather H. Sestili, Kathleen Foley, Elysia C. Saputra +5 more

Comparative genomics of Balto, a famous historic dog, captures lost diversity of 1920s sled dogs

Science(2023)10.1126/science.abn5887

N/A

0.406DataRank · unranked

14 citations

Heather J. Huson, Kathleen M. Morrill, Mingshan Wang, Xue Li, Krishnamoorthy Srikanth +90 more

Context-dependent regulatory variants in Alzheimer’s disease

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.11.659973

N/A

0.171DataRank · unranked

2 citations

Yaxuan Liu, Ashley R. Brown, Heather H. Sestili, Easwaran Ramamurthy, Xushen Xiong +11 more

Etiological basis for chronic pain genetic variation in brain and dorsal root ganglia cell types

medRxiv(2025)10.1101/2025.07.03.25330832

N/A

0DataRank · unranked

1 citations

Marc Parisien, Michael J. Leone, Chaitanya Srinivasan, Huasheng Yu, Asta Arendt-Tranholm +12 more

Inferring mammalian tissue-specific regulatory conservation by predicting tissue-specific differences in open chromatin

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.04.410795

N/A

0DataRank · unranked

7 citations

Daniel E. Schäffer, Morgan Wirthlin, Alyssa J. Lawler, Ashley R. Brown, Michael Kleyman +2 more

The Regulatory Evolution of the Primate Fine-Motor System

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.27.356733

N/A

0DataRank · unranked

5 citations

Irene M. Kaplow, Alyssa J. Lawler, Jing He, BaDoi N. Phan, Ashley R. Brown +3 more

scAAVengr: Single-cell transcriptome-based quantification of engineered AAVs in non-human primate retina

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.01.323196

N/A

0DataRank · unranked

4 citations

Molly Johnson, Michael Kleyman, Serhan Turunç, Jing He, Sara Jabalameli +14 more

Transcriptional Diversity of Medium Spiny Neurons in the Primate Striatum

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.25.354159

N/A

0DataRank · unranked

2 citations

Michael Kleyman, Jianjiao Chen, Aydin Alikaya, Kathryn M. Rothenhoefer, Bilge Esin Öztürk +6 more

Transcriptional and anatomical diversity of medium spiny neurons in the primate striatum

Current Biology(2021)10.1016/j.cub.2021.10.015

N/A

0DataRank · unranked

100 citations

Michael Kleyman, Jianjiao Chen, Aydin Alikaya, Kathryn M. Rothenhoefer, Bilge Esin Öztürk +7 more

Molecular rhythm alterations in prefrontal cortex and nucleus accumbens associated with opioid use disorder

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.07.463568

N/A

0DataRank · unranked

3 citations

Wei Zong, Jill R. Glausier, Sam-Moon Kim, Micah A. Shelton, BaDoi N. Phan +7 more

Molecular rhythm alterations in prefrontal cortex and nucleus accumbens associated with opioid use disorder

Translational Psychiatry(2022)10.1038/s41398-022-01894-1

N/A

0DataRank · unranked

35 citations

Wei Zong, Jill R. Glausier, Sam-Moon Kim, Micah A. Shelton, BaDoi N. Phan +7 more

Vocal learning-associated convergent evolution in mammalian proteins and regulatory elements

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.17.520895

N/A

0DataRank · unranked

8 citations

Tobias A. Schmid, Julie E. Elie, Xiaomeng Zhang, Varvara A. Shvareva, Ashley Rakuljic +12 more

Spatial, transcriptomic and epigenomic analyses link dorsal horn neurons to chronic pain genetic predisposition

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.01.486135

N/A

0DataRank · unranked

5 citations

Michael J. Leone, Michael Kleyman, Alexander Chamessian, BaDoi N. Phan, Bettega Costa Lopes +19 more

Integrating gene annotation with orthology inference at scale

Science(2023)10.1126/science.abn3107

N/A

0DataRank · unranked

212 citations

Chetan Munegowda, Ekaterina Osipova, David Jebb, Virag Sharma, Moritz Blumer +91 more

Insights into mammalian TE diversity through the curation of 248 genome assemblies

Science(2023)10.1126/science.abn1430

N/A

0DataRank · unranked

135 citations

Nicole S. Paulat, Jennifer M. Korstian, Jenna Grimshaw, Michaela K. Halsey, Kevin A. Sullivan +83 more

Leveraging base-pair mammalian constraint to understand genetic variation and human disease

Science(2023)10.1126/science.abn2937

N/A

0DataRank · unranked

121 citations

Jennifer R. S. Meadows, Steven Gazal, BaDoi N. Phan, Xue Li, Diane P. Genereux +70 more

Chiropterans Are a Hotspot for Horizontal Transfer of DNA Transposons in Mammalia

Molecular Biology and Evolution(2023)10.1093/molbev/msad092

N/A

0DataRank · unranked

18 citations

Jessica M. Storer, Diana D. Moreno-Santillán, Austin Osmanski, Kevin A. Sullivan, Jenna Grimshaw +85 more

Psychiatric risk gene Transcription Factor 4 (TCF4) regulates the density and connectivity of distinct inhibitory interneuron subtypes

Molecular Psychiatry(2023)10.1038/s41380-023-02248-z

N/A

0DataRank · unranked

16 citations

BaDoi N. Phan, Gina Shim, Gregory R. Hamersky, Norah Sadowski, Thomas S. O’Donnell +5 more

Vocal learning–associated convergent evolution in mammalian proteins and regulatory elements

Science(2024)10.1126/science.abn3263

N/A

0DataRank · unranked

36 citations

Tobias A. Schmid, Julie E. Elie, Xiaomeng Zhang, Amanda Kowalczyk, Ruby Redlich +89 more

Machine learning identification of enhancers in the rhesus macaque genome

Neuron(2025)10.1016/j.neuron.2025.04.030

N/A

0DataRank · unranked

7 citations

BaDoi N. Phan, Willa G. Kerkhoff, Aydin Alikaya, Tao Hong, Olivia R Brull +16 more

The cell-type–specific genetic architecture of chronic pain in brain and dorsal root ganglia

Journal of Clinical Investigation(2025)10.1172/jci197583

N/A

0DataRank · unranked

4 citations

Marc Parisien, Michael J. Leone, Chaitanya Srinivasan, Huasheng Yu, Asta Arendt-Tranholm +12 more

A molecular and spinal circuit basis for the functional segregation of itch and pain

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.31.667966

N/A

0DataRank · unranked

2 citations

Kelly A. Corrigan, Sean-Paul G. Williams, Cédric Peirs, Michael J. Leone, Daniel J. Headrick +13 more

Andreas R. Pfenning

Indexed papers

Top data-sharing exemplar

Papers