Dmitri A. Petrov

Also affiliated with Chan Zuckerberg Biohub San Francisco, Chan Zuckerberg Initiative (United States), Stanford Medicine, Stanford Cancer Institute, Stanford University

Biochemistry, Genetics and Molecular BiologyMedicineAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

3.3Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Drosophila Evolution over Space and Time (DEST): A New Population Genomics Resource

Molecular Biology and Evolution(2021)10.1093/molbev/msab259

Top 12%

1.7DataRank

Top 12%86 citations

Joaquin C. B. Nunez, María Bogaerts-Márquez, Jesús Murga-Moreno, Margot Paris, Joseph Outten +65 more

Papers

Driven by 69 papers — median percentile 65. Top paper: “The AMBRA1 E3 ligase adaptor regulates the stability of cyclin D”.

The AMBRA1 E3 ligase adaptor regulates the stability of cyclin D

Nature(2021)10.1038/s41586-021-03474-7

N/A

4.5DataRank · unranked

168 citations

Chuan Li, Edwin E. Jeng, Samuel Loebell, Myung Chang Lee, Christopher W. Murray +25 more

Widespread introgression across a phylogeny of 155 Drosophila genomes

Current Biology(2021)10.1016/j.cub.2021.10.052

N/A

3.7DataRank · unranked

318 citations

Bernard Kim, Jeremy Wang, Ellie E. Armstrong, David Peede, Emmanuel R. R. D’Agostino +10 more

Drosophila Evolution over Space and Time (DEST): A New Population Genomics Resource

Molecular Biology and Evolution(2021)10.1093/molbev/msab259

Top 12%

1.7DataRank

Top 12%86 citations

Joaquin C. B. Nunez, María Bogaerts-Márquez, Jesús Murga-Moreno, Margot Paris, Joseph Outten +65 more

Highly contiguous assemblies of 101 drosophilid genomes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.14.422775

Top 23%

0.878DataRank

Top 23%22 citations

Jeremy Wang, Danny E. Miller, Olga Barmina, Emily Delaney, Ammon Thompson +34 more

Footprints of Worldwide Adaptation in Structured Populations of Drosophila melanogaster Through the Expanded DEST 2.0 Genomic Resource

Molecular Biology and Evolution(2025)10.1093/molbev/msaf132

Top 46%

0.396DataRank

Top 46%13 citations

Marta Coronado‐Zamora, Mathieu Gautier, Martin Kapun, Sonja Steindl, Lino Ometto +95 more

Drosophila Evolution over Space and Time (DEST) - A New Population Genomics Resource

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.01.428994

Top 53%

0.318DataRank

Top 53%4 citations

Joaquin C. B. Nunez, María Bogaerts-Márquez, Jesús Murga-Moreno, Margot Paris, Joseph Outten +62 more

Parameterizing Pantherinae: De Novo Mutation Rate Estimates from Panthera and Neofelis Pedigrees

Genome Biology and Evolution(2025)10.1093/gbe/evaf060

N/A

0.253DataRank · unranked

4 citations

Sarah B. Carey, Alex Harkess, Gabriele Zenato Lazzari, Katherine A. Solari, Jesús E. Maldonado +8 more

Shifts in antimalarial drug policy since 2006 have rapidly selected P. falciparum resistance alleles in Angola

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.29.310706

N/A

0DataRank · unranked

1 citations

Fátima Reis, Dmitri A. Petrov, Sandra Beleza, Emily R. Ebel

A spatio-temporal assessment of simian/human immunodeficiency virus (SHIV) evolution reveals a highly dynamic process within the host

UNC Libraries(2020)10.17615/t8jq-bq14

N/A

0DataRank · unranked

0 citations

Hu, Shiu-Lok, Pleuni S. Pennings, Dmitri A. Petrov, Angela D. M. Kashuba, Patricia Polacino +5 more

Genetic Determinants of EGFR-Driven Lung Cancer Growth and Therapeutic Response In Vivo

Cancer Discovery(2021)10.1158/2159-8290.cd-20-1385

N/A

0DataRank · unranked

122 citations

Chuan Li, Hongchen Cai, Jessica A. Hellyer, Wen-Yang Lin, Deborah Ayeni +15 more

Human–chimpanzee fused cells reveal cis-regulatory divergence underlying skeletal evolution

Nature Genetics(2021)10.1038/s41588-021-00804-3

N/A

0DataRank · unranked

98 citations

Rachel M. Agoglia, Maia Kinnebrew, Wei E. Gordon, Danqiong Sun, Vivek K. Bajpai +12 more

A Functional Taxonomy of Tumor Suppression in Oncogenic KRAS–Driven Lung Cancer

Cancer Discovery(2021)10.1158/2159-8290.cd-20-1325

N/A

0DataRank · unranked

62 citations

Su Kit Chew, Chuan Li, Min K. Tsai, Laura Andrejka, Christopher W. Murray +16 more

Quantitative In Vivo Analyses Reveal a Complex Pharmacogenomic Landscape in Lung Adenocarcinoma

Cancer Research(2021)10.1158/0008-5472.can-21-0716

N/A

0DataRank · unranked

23 citations

Wen‐Yang Lin, Hira Rizvi, Hongchen Cai, Christopher D. McFarland, Zoe Rogers +6 more

Historical trends and new surveillance of Plasmodium falciparum drug resistance markers in Angola

Malaria Journal(2021)10.1186/s12936-021-03713-2

N/A

0DataRank · unranked

19 citations

Fátima Reis, Dmitri A. Petrov, Sandra Beleza, Emily R. Ebel

Direct observation of adaptive tracking on ecological timescales in Drosophila

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.27.441526

N/A

0DataRank · unranked

15 citations

Sharon Greenblum, Subhash Rajpurohit, Nicolas J. Betancourt, Jinjoo Hanna, Susanne Tilk +4 more

Combinatorial tumor suppressor inactivation efficiently initiates lung adenocarcinoma with therapeutic vulnerabilities

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.20.464849

N/A

0DataRank · unranked

1 citations

Gábor Boross, Carly Weiss, Christopher W. Murray, Jess D. Hebert, Hongchen Cai +17 more

Multiplexed identification of RAS paralog imbalance as a driver of lung cancer growth

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.08.451571

N/A

0DataRank · unranked

1 citations

Emily G. Shuldiner, Marcus R. Kelly, Christopher W. Murray, Jess D. Hebert, Laura Andrejka +11 more

Multiplexed identification of RAS paralog imbalance as a driver of lung cancer growth

Research Square(2021)10.21203/rs.3.rs-900548/v1

N/A

0DataRank · unranked

0 citations

Emily G. Shuldiner, Marcus R. Kelly, Christopher W. Murray, Jess D. Hebert, Laura Andrejka +11 more

Direct observation of adaptive tracking on ecological time scales in Drosophila

Science(2022)10.1126/science.abj7484

N/A

0DataRank · unranked

212 citations

Sharon Greenblum, Subhash Rajpurohit, Nicolas J. Betancourt, Jinjoo Hanna, Susanne Tilk +4 more

Most cancers carry a substantial deleterious load due to Hill-Robertson interference

eLife(2022)10.7554/elife.67790

N/A

0DataRank · unranked

32 citations

Svyatoslav Tkachenko, Christina Curtis, Dmitri A. Petrov, Christopher D. McFarland, Susanne Tilk

Combinatorial Inactivation of Tumor Suppressors Efficiently Initiates Lung Adenocarcinoma with Therapeutic Vulnerabilities

Cancer Research(2022)10.1158/0008-5472.can-22-0059

N/A

0DataRank · unranked

18 citations

Gábor Boross, Carly Weiss, Christopher W. Murray, Jess D. Hebert, Hongchen Cai +17 more

Tumor suppressor pathways shape EGFR-driven lung tumor progression and response to treatment

Molecular & Cellular Oncology(2022)10.1080/23723556.2021.1994328

N/A

0DataRank · unranked

1 citations

Chuan Li, Hongchen Cai, Dmitri A. Petrov, Monte M. Winslow, Katerina Politi +1 more

Oncogenic context shapes the fitness landscape of tumor suppression

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.24.511787

N/A

0DataRank · unranked

10 citations

Joseph Juan, Lafia Sebastian, Vy B. Tran, Wensheng Nie, Gregory D. Wall +19 more

A multiplexed in vivo approach to identify driver genes in small cell lung cancer

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.28.485708

N/A

0DataRank · unranked

2 citations

Hongchen Cai, Christopher W. Murray, Chuan Li, Yan Ting Shue, Laura Andrejka +14 more

Cancers adapt to their mutational load by buffering protein misfolding stress

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.08.495407

N/A

0DataRank · unranked

0 citations

Judith Frydman, Christina Curtis, Dmitri A. Petrov, Susanne Tilk

Extreme Sensitivity of Fitness to Environmental Conditions: Lessons from #1BigBatch

Journal of Molecular Evolution(2023)10.1007/s00239-023-10114-3

N/A

0DataRank · unranked

33 citations

Kara Schmidlin, Daphne Newell, Rachel Eder, Sam Apodaca, Grace Y. Lam +3 more

Oncogenic context shapes the fitness landscape of tumor suppression

Nature Communications(2023)10.1038/s41467-023-42156-y

N/A

0DataRank · unranked

32 citations

Joseph Juan, Lafia Sebastian, Vy B. Tran, Wensheng Nie, Gregory D. Wall +19 more

Multiplexed screens identify RAS paralogues HRAS and NRAS as suppressors of KRAS-driven lung cancer growth

Nature Cell Biology(2023)10.1038/s41556-022-01049-w

N/A

0DataRank · unranked

33 citations

Emily G. Shuldiner, Marcus R. Kelly, Christopher W. Murray, Jess D. Hebert, Laura Andrejka +11 more

A multiplexed in vivo approach to identify driver genes in small cell lung cancer

Cell Reports(2023)10.1016/j.celrep.2023.111990

N/A

0DataRank · unranked

30 citations

Hongchen Cai, Christopher W. Murray, Chuan Li, Yan Ting Shue, Laura Andrejka +14 more

Fully accessible fitness landscape of oncogene-negative lung adenocarcinoma

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2303224120

N/A

0DataRank · unranked

6 citations

Laura Andrejka, Márton Szamecz, Monte M. Winslow, Dmitri A. Petrov, Gábor Boross +1 more

Prolonged delays in human microbiota transmission after a controlled antibiotic perturbation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.26.559480

N/A

0DataRank · unranked

22 citations

Sophie Jean Walton, D.A. Goldman, Maike L. Morrison, Adrian J. Verster, Autumn B. Parrott +9 more

Cancers adapt to their mutational load by buffering protein misfolding stress

eLife(2023)10.7554/elife.87301

N/A

0DataRank · unranked

9 citations

Judith Frydman, Christina Curtis, Dmitri A. Petrov, Susanne Tilk

Continuously fluctuating selection reveals extreme granularity and parallelism of adaptive tracking

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.16.562586

N/A

0DataRank · unranked

9 citations

Sonia Berardi, Hayes Oken, A. Huynh, Paul Schmidt, Dmitri A. Petrov +1 more

Antigenic diversity in malaria parasites is maintained on extrachromosomal DNA

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.02.526885

N/A

0DataRank · unranked

3 citations

Bernard Kim, Marina McDew‐White, Elizabeth S. Egan, Timothy J. C. Anderson, Dmitri A. Petrov +1 more

Fully accessible fitness landscape of oncogene-negative lung adenocarcinoma

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.30.526178

N/A

0DataRank · unranked

2 citations

Laura Andrejka, Monte M. Winslow, Dmitri A. Petrov, Gábor Boross, Maryam Yousefi

Competition for shared resources increases dependence on initial population size during coalescence of gut microbial communities

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.29.569120

N/A

0DataRank · unranked

2 citations

Katherine S. Xue, Autumn B. Parrott, Rashi R. Jeeda, Lauryn R. Franzese, Jaime G Lopez +6 more

Strong environmental memory revealed by experimental evolution in static and fluctuating environments

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.14.557739

N/A

0DataRank · unranked

1 citations

Shaili Mathur, Dmitri A. Petrov, Clare Abreu

Data from Combinatorial Inactivation of Tumor Suppressors Efficiently Initiates Lung Adenocarcinoma with Therapeutic Vulnerabilities

(2023)10.1158/0008-5472.c.6513717.v1

N/A

0DataRank · unranked

0 citations

Gábor Boross, Carly Weiss, Christopher W. Murray, Jess D. Hebert, Hongchen Cai +17 more

Data from Quantitative In Vivo Analyses Reveal a Complex Pharmacogenomic Landscape in Lung Adenocarcinoma

(2023)10.1158/0008-5472.c.6513663

N/A

0DataRank · unranked

0 citations

Wen-Yang Lin, Hira Rizvi, Hongchen Cai, Christopher D. McFarland, Zoe Rogers +6 more

Data from A Functional Taxonomy of Tumor Suppression in Oncogenic KRAS–Driven Lung Cancer

(2023)10.1158/2159-8290.c.6549376.v1

N/A

0DataRank · unranked

0 citations

Su Kit Chew, Chuan Li, Min K. Tsai, Laura Andrejka, Christopher W. Murray +16 more

Author Response: Cancers adapt to their mutational load by buffering protein misfolding stress

(2023)10.7554/elife.87301.1.sa0

N/A

0DataRank · unranked

0 citations

Judith Frydman, Christina Curtis, Dmitri A. Petrov, Susanne Tilk

Bayesian inference of relative fitness on high-throughput pooled competition assays

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.14.562365

N/A

0DataRank · unranked

0 citations

Madhav Mani, Dmitri A. Petrov, Manuel Razo‐Mejia

Continuously fluctuating selection reveals fine granularity of adaptation

Nature(2024)10.1038/s41586-024-07834-x

N/A

0DataRank · unranked

47 citations

Skyler Berardi, Hayes Oken, A. Huynh, Egor Lappo, Paul Schmidt +2 more

A high-resolution two-step evolution experiment in yeast reveals a shift from pleiotropic to modular adaptation

PLoS Biology(2024)10.1371/journal.pbio.3002848

N/A

0DataRank · unranked

11 citations

Yuping Li, Gavin Sherlock, Dmitri A. Petrov, Grant Kinsler

Genomics of a sexually selected sperm ornament and female preference in Drosophila

Nature Ecology & Evolution(2024)10.1038/s41559-024-02587-2

N/A

0DataRank · unranked

8 citations

R. Antonio Gómez, Kirill Borziak, Amaar Asif, Abelard S. Cong, Patrick O’Grady +10 more

Drosophila melanogaster pigmentation demonstrates adaptive phenotypic parallelism over multiple spatiotemporal scales

Evolution Letters(2025)10.1093/evlett/qraf008

N/A

0DataRank · unranked

7 citations

Jessica A. Rhodes, M. Berner, Sharon Greenblum, Mark C. Bitter, Emily L. Behrman +6 more

Environmental memory alters the fitness effects of adaptive mutations in fluctuating environments

Nature Ecology & Evolution(2024)10.1038/s41559-024-02475-9

N/A

0DataRank · unranked

10 citations

Shaili Mathur, Dmitri A. Petrov, Clare Abreu

Bayesian inference of relative fitness on high-throughput pooled competition assays

PLoS Computational Biology(2024)10.1371/journal.pcbi.1011937

N/A

0DataRank · unranked

7 citations

Madhav Mani, Dmitri A. Petrov, Manuel Razo‐Mejia

Cancers adapt to their mutational load by buffering protein misfolding stress

eLife(2024)10.7554/elife.87301.2

N/A

0DataRank · unranked

4 citations

Judith Frydman, Christina Curtis, Dmitri A. Petrov, Susanne Tilk

A STAG2-PAXIP1/PAGR1 axis suppresses lung tumorigenesis

The Journal of Experimental Medicine(2024)10.1084/jem.20240765

N/A

0DataRank · unranked

4 citations

Yuning J. Tang, Haiqing Xu, King L. Hung, Julia A. Belk, Hongchen Cai +13 more

Improving the Accuracy of Bulk Fitness Assays by Correcting Barcode Processing Biases

Molecular Biology and Evolution(2024)10.1093/molbev/msae152

N/A

0DataRank · unranked

4 citations

Grant Kinsler, Dmitri A. Petrov, Mikhail Tikhonov, Ryan Seamus McGee

Efficient and multiplexed somatic genome editing with Cas12a mice

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.07.583774

N/A

0DataRank · unranked

8 citations

Haiqing Xu, Yuning J. Tang, Paloma Ruiz, Colin Detrick, Jing Wang +11 more

Parameterizing Pantherinae: de novo mutation rate estimates from Panthera and Neofelis pedigrees

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.06.587788

N/A

0DataRank · unranked

4 citations

Sarah B. Carey, Alex Harkess, Gabriele Zenato Lazzari, Katherine A. Solari, Jesús E. Maldonado +8 more

Massively parallel interrogation of the fitness of natural variants in ancient signaling pathways reveals pervasive local adaptation

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.30.621178

N/A

0DataRank · unranked

4 citations

Jean C. C. Vila, Shi-An A. Chen, Manuel Razo‐Mejia, Olivia Ghosh, Daniel F. Jarosz +3 more

A STAG2-PAXIP1/PAGR1 axis suppresses lung tumorigenesis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.14.613043

N/A

0DataRank · unranked

2 citations

Yuning J. Tang, Haiqing Xu, King L. Hung, Julia A. Belk, Hongchen Cai +13 more

Competition for shared resources increases dependence on initial population size during coalescence of gut microbial communities

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2322440122

N/A

0DataRank · unranked

23 citations

Katherine S. Xue, Autumn B. Parrott, Jamie A. Lopez, Jean C. C. Vila, Rashi R. Jeeda +9 more

Efficient and multiplexed somatic genome editing with Cas12a mice

Nature Biomedical Engineering(2025)10.1038/s41551-025-01407-7

N/A

0DataRank · unranked

8 citations

Haiqing Xu, Yuning J. Tang, Paloma Ruiz, Colin Detrick, Jing Wang +13 more

EML4−ALK Variant-Specific Genetic Interactions Shape Lung Tumorigenesis

Cancer Discovery(2025)10.1158/2159-8290.cd-24-1417

N/A

0DataRank · unranked

4 citations

Emily G. Shuldiner, Kálmán Somogyi, Karen Y. Shih, Óscar González-Velasco, Mulham Najajreh +15 more

Low-dimensional genotype-fitness mapping across divergent environments suggests a limiting functions model of fitness

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.05.647371

N/A

0DataRank · unranked

4 citations

Grant Kinsler, Benjamin H. Good, Dmitri A. Petrov, Olivia M. Ghosh

Learning the Shape of Evolutionary Landscapes: Geometric Deep Learning Reveals Hidden Structure in Phenotype-to-Fitness Maps

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.07.652616

N/A

0DataRank · unranked

2 citations

Madhav Mani, Dmitri A. Petrov, Manuel Razo‐Mejia

An empirical long-term competition among natural yeast isolates reveals that short-term fitness largely but not entirely predicts long-term outcomes

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.09.681448

N/A

0DataRank · unranked

1 citations

Olivia M. Ghosh, Jean C. C. Vila, Shaili Mathur, Abhishek Dutta, Marion Garin +3 more

Fitness variation across subtle environmental perturbations reveals local modularity and global pleiotropy of adaptation

eLife(2020)10.7554/elife.61271

N/A

0DataRank · unranked

135 citations

Kerry Geiler‐Samerotte, Dmitri A. Petrov, Grant Kinsler

Manual validation finds only ultra-long long-read sequencing enables faithful, population-level structural variant calling in Drosophila melanogaster euchromatin

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.21.649852

N/A

0DataRank · unranked

0 citations

Hannah R. Gellert, Jessica A. Rhodes, Bernard Kim, Dmitri A. Petrov, James A. Hemker

Widespread introgression across a phylogeny of 155 Drosophila genomes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.14.422758

N/A

0DataRank · unranked

31 citations

Bernard Kim, Jeremy Wang, Ellie E. Armstrong, David Peede, Emmanuel R. R. D’Agostino +10 more

Quantitative in vivo analyses reveal a complex pharmacogenomic landscape in lung adenocarcinoma

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.28.923912

N/A

0DataRank · unranked

5 citations

Wen‐Yang Lin, Hira Rizvi, Hongchen Cai, Christopher D. McFarland, Zoe Rogers +6 more

Most cancers carry a substantial deleterious load due to Hill-Robertson interference

Research Square(2020)10.21203/rs.3.rs-90804/v1

N/A

0DataRank · unranked

3 citations

Susanne Tilk, Christina Curtis, Dmitri A. Petrov, Christopher D. McFarland

Genetic determinants of EGFR -Driven Lung Cancer Growth and Therapeutic Response In Vivo

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.13.036921

N/A

0DataRank · unranked

3 citations

Chuan Li, Hongchen Cai, Jessica A. Hellyer, Wen-Yang Lin, Deborah Ayeni +15 more

A genotype-phenotype-fitness map reveals local modularity and global pleiotropy of adaptation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.25.172197

N/A

0DataRank · unranked

3 citations

Kerry Geiler‐Samerotte, Dmitri A. Petrov, Grant Kinsler

Common host variation drives malaria parasite fitness in healthy human red cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.08.332494

N/A

0DataRank · unranked

3 citations

Frans A. Kuypers, Carrie Lin, Dmitri A. Petrov, Elizabeth S. Egan, Emily R. Ebel

Dmitri A. Petrov

Indexed papers

Top data-sharing exemplar

Papers