Ayshwarya Subramanian

Broad Institute

Biochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.7Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A microRNA expression and regulatory element activity atlas of the mouse immune system

Nature Immunology(2021)10.1038/s41590-021-00944-y

Top 15%

1.4DataRank

Top 15%38 citations

Aleksandra Wroblewska, Maxime Dhainaut, Hideyuki Yoshida, Jonathan M. Shaffer, Anela Bektesevic +91 more

Papers

Driven by 33 papers — median percentile 85. Top paper: “COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets”.

COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets

Nature(2021)10.1038/s41586-021-03570-8

N/A

10.7DataRank · unranked

879 citations

Carly G.K. Ziegler, Graham Heimberg, Rachelly Normand, Yiming Yang, Åsa Segerstolpe +95 more

Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics

Nature Medicine(2021)10.1038/s41591-020-01227-z

N/A

8.2DataRank · unranked

378 citations

Malte D. Luecken, Gökcen Eraslan, Lisa Sikkema, Avinash Waghray, Graham Heimberg +95 more

The neutrotime transcriptional signature defines a single continuum of neutrophils across biological compartments

Nature Communications(2021)10.1038/s41467-021-22973-9

N/A

7.1DataRank · unranked

347 citations

Felix A. Radtke, Pierre Cunin, Giuseppina Stifano, Anaïs Levescot, Brinda Vijaykumar +85 more

A High-Content Screen for Mucin-1-Reducing Compounds Identifies Fostamatinib as a Candidate for Rapid Repurposing for Acute Lung Injury

Cell Reports Medicine(2020)10.1016/j.xcrm.2020.100137

N/A

3.1DataRank · unranked

72 citations

Eriene-Heidi Sidhom, Abhigyan Satyam, Brian T. Chamberlain, Moran Dvela‐Levitt, Michelle Melanson +31 more

The contribution of historical processes to contemporary extinction risk in placental mammals

Science(2023)10.1126/science.abn5856

N/A

1.9DataRank · unranked

106 citations

Megan A. Supple, Ayshwarya Subramanian, Anish Mudide, Ross Swofford, Aitor Serres‐Armero +87 more

A microRNA expression and regulatory element activity atlas of the mouse immune system

Nature Immunology(2021)10.1038/s41590-021-00944-y

Top 15%

1.4DataRank

Top 15%38 citations

Aleksandra Wroblewska, Maxime Dhainaut, Hideyuki Yoshida, Jonathan M. Shaffer, Anela Bektesevic +91 more

Tim-3 adapter protein Bat3 acts as an endogenous regulator of tolerogenic dendritic cell function

Science Immunology(2022)10.1126/sciimmunol.abm0631

N/A

1.4DataRank · unranked

52 citations

Nandini Acharya, Ayshwarya Subramanian, Vinee Purohit, Marcin Tabaka, Yu Hou +11 more

Single-nucleus cross-tissue molecular reference maps to decipher disease gene function

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.19.452954

Top 16%

1.3DataRank

Top 16%27 citations

Eugene Drokhlyansky, Shankara Anand, Ayshwarya Subramanian, Evgenij Fiskin, Michal Slyper +19 more

Neuropeptide signalling orchestrates T cell differentiation

Nature(2024)10.1038/s41586-024-08049-w

N/A

1.2DataRank · unranked

64 citations

Lin-Yu Sun, Martin W. LaFleur, Linglin Huang, Conner Lambden, Pratiksha I. Thakore +20 more

Protective role for kidney TREM2 macrophages in obesity- and diabetes-induced kidney injury

Cell Reports(2024)10.1016/j.celrep.2024.114253

N/A

1.2DataRank · unranked

45 citations

Katherine A. Vernon, Yiming Zhou, Jamie L. Marshall, Maria Alimova, Carlos Arevalo +35 more

Multivariable association discovery in population-scale meta-omics studies

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009442

N/A

1.2DataRank · unranked

2502 citations

Ali Rahnavard, Lauren J. McIver, Siyuan Ma, Yancong Zhang, Long H. Nguyen +15 more

A Cellular Taxonomy of the Bone Marrow Stroma in Homeostasis and Leukemia

Cell(2019)10.1016/j.cell.2019.04.040

N/A

1.0DataRank · unranked

905 citations

Dariusz Przybylski, Monika S. Kowalczyk, Youmna Kfoury, Nicolas Severe, Karin Gustafsson +16 more

Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram

Nature Methods(2021)10.1038/s41592-021-01264-7

N/A

1.0DataRank · unranked

856 citations

Gabriele Scalia, Lorenzo Buffoni, Raghav Avasthi, Ziqing Lu, Aman Sanger +17 more

Immune checkpoint TIM-3 regulates microglia and Alzheimer’s disease

Nature(2025)10.1038/s41586-025-08852-z

N/A

0.998DataRank · unranked

64 citations

Ayshwarya Subramanian, Zhuoran Yin, Ahad Khalilnezhad, Yufan Wu, Danyang He +38 more

Multivariable Association Discovery in Population-scale Meta-omics Studies

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.20.427420

N/A

0.923DataRank · unranked

469 citations

Ali Rahnavard, Lauren J. McIver, Siyuan Ma, Yancong Zhang, Long H. Nguyen +15 more

Emergence of a High-Plasticity Cell State during Lung Cancer Evolution

Cancer Cell(2020)10.1016/j.ccell.2020.06.012

N/A

0.896DataRank · unranked

393 citations

Matan Hofree, Jason E. Chan, David A. Canner, Katherine Wu, Marianna Trakala +33 more

Single-Cell Analysis of the Normal Mouse Aorta Reveals Functionally Distinct Endothelial Cell Populations

Circulation(2019)10.1161/circulationaha.118.038362

N/A

0.869DataRank · unranked

327 citations

Shamsudheen K. Vellarikkal, Elazer R. Edelman, Ayshwarya Subramanian, Patrick T. Ellinor, Prisca Liberali +5 more

Mouse fetal growth restriction through parental and fetal immune gene variation and intercellular communications cascade

Nature Communications(2022)10.1038/s41467-022-32171-w

N/A

0.813DataRank · unranked

23 citations

Orr Ashenberg, Jack Lee, Samantha J. Riesenfeld, Matan Hofree, Maria Aggelakopoulou +21 more

Single cell census of human kidney organoids shows reproducibility and diminished off-target cells after transplantation

Nature Communications(2019)10.1038/s41467-019-13382-0

N/A

0.808DataRank · unranked

218 citations

Eriene-Heidi Sidhom, Maheswarareddy Emani, Nareh Sahakian, Yiming Zhou, Maria Kost-Alimova +12 more

Obesity-instructed TREM2 high macrophages identified by comparative analysis of diabetic mouse and human kidney at single cell resolution

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.30.446342

N/A

0.768DataRank · unranked

14 citations

Yiming Zhou, Jamie L. Marshall, Maria Alimova, Fan Zhang, Michal Slyper +23 more

A single-nucleus and spatial transcriptomic atlas of the COVID-19 liver reveals topological, functional, and regenerative organ disruption in patients

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.27.514070

N/A

0.677DataRank · unranked

16 citations

Dimitra Karagkouni, Nikolaos Kalavros, Johannes C. Melms, Sebastian Niezen, Toni Marie Delorey +63 more

High-resolution Slide-seqV2 spatial transcriptomics enables discovery of disease-specific cell neighborhoods and pathways

iScience(2022)10.1016/j.isci.2022.104097

N/A

0.673DataRank · unranked

88 citations

Teia Noel, Qingbo S. Wang, Haiqi Chen, Evan Murray, Ayshwarya Subramanian +12 more

Community-wide hackathons to identify central themes in single-cell multi-omics

Genome Biology(2021)10.1186/s13059-021-02433-9

N/A

0.436DataRank · unranked

15 citations

Al J. Abadi, Emily F. Davis-Marcisak, Lauren Hsu, Arshi Arora, Alexis Coullomb +26 more

A High Content Screen for Mucin-1-Reducing Compounds Identifies Fostamatinib as a Candidate for Rapid Repurposing for Acute Lung Injury during the COVID-19 pandemic

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.30.180380

N/A

0.396DataRank · unranked

13 citations

Eriene-Heidi Sidhom, Abhigyan Satyam, Moran Dvela‐Levitt, Michelle Melanson, Brian T. Chamberlain +30 more

A single-nucleus and spatial transcriptomic atlas of the COVID-19 liver reveals topological, functional, and regenerative organ disruption in patients

Genome Biology(2025)10.1186/s13059-025-03499-5

N/A

0.363DataRank · unranked

7 citations

Dimitra Karagkouni, Nikolaos Kalavros, Johannes C. Melms, Sebastian Niezen, Toni Marie Delorey +70 more

RAAS blockade, kidney disease, and expression of ACE2 , the entry receptor for SARS-CoV-2, in kidney epithelial and endothelial cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.23.167098

N/A

0.312DataRank · unranked

7 citations

Katherine A. Vernon, Michal Slyper, Julia Waldman, Malte D. Luecken, Kirk Gosik +13 more

Parental-fetal interplay of immune genes leads to intrauterine growth restriction

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.26.437292

N/A

0.126DataRank · unranked

1 citations

Orr Ashenberg, Jack Lee, Samantha J. Riesenfeld, Matan Hofree, Maria Aggelakopoulou +20 more

CRISPR screens reveal neuropeptide signaling orchestrates T helper cell differentiation

Research Square(2022)10.21203/rs.3.rs-1953978/v1

N/A

0DataRank · unranked

0 citations

Yu Hou, Martin W. LaFleur, Linglin Huang, Conner Lambden, Pratiksha I. Thakore +14 more

Identification of a protective microglial state mediated by miR-155 and interferon-γ signaling in a mouse model of Alzheimer’s disease

Nature Neuroscience(2023)10.1038/s41593-023-01355-y

N/A

0DataRank · unranked

112 citations

Shawn Herron, Sebastian Silveira, Kilian L. Kleemann, Christian Gauthier, Dania Mallah +18 more

Community-wide hackathons to identify central themes in single-cell multi-omics

UNC Libraries(2025)10.17615/96cj-z232

N/A

0DataRank · unranked

0 citations

Al J. Abadi, Emily F. Davis-Marcisak, Lauren Hsu, Arshi Arora, Alexis Coullomb +26 more

Transcription factor TCF1 binds to RORγt and orchestrates a regulatory network that determines homeostatic Th17 cell state

Immunity(2024)10.1016/j.immuni.2024.09.017

N/A

0DataRank · unranked

29 citations

Ayshwarya Subramanian, Linglin Huang, Hanning Cheng, S. Harsha Krovi, Yufan Wu +12 more

Author Correction: Community-wide hackathons to identify central themes in single-cell multi-omics

Genome Biology(2021)10.1186/s13059-021-02468-y

N/A

0DataRank · unranked

0 citations

Al J. Abadi, Emily F. Davis-Marcisak, Lauren Hsu, Arshi Arora, Alexis Coullomb +26 more

Author Correction: Community-wide hackathons to identify central themes in single-cell multi-omics

UNC Libraries(2025)10.17615/vzc0-qk25

N/A

0DataRank · unranked

0 citations

Al J. Abadi, Emily F. Davis-Marcisak, Lauren Hsu, Arshi Arora, Alexis Coullomb +26 more

Ayshwarya Subramanian

Indexed papers

Top data-sharing exemplar

Papers