Upasana L. Mallimadugula

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 10 papers. Top paper: “SARS-CoV-2 Simulations Go Exascale to Capture Spike Opening and Reveal Cryptic Pockets Across the Proteome”.

SARS-CoV-2 Simulations Go Exascale to Capture Spike Opening and Reveal Cryptic Pockets Across the Proteome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.27.175430

N/A

0DataRank · unranked

61 citations

Justin R. Porter, Michael D. Ward, Sukrit Singh, Neha Vithani, Artur Meller +13 more

SARS-CoV-2 simulations go exascale to predict dramatic spike opening and cryptic pockets across the proteome

Nature Chemistry(2021)10.1038/s41557-021-00707-0

N/A

0DataRank · unranked

304 citations

Justin R. Porter, Michael D. Ward, Sukrit Singh, Neha Vithani, Artur Meller +13 more

Opening of a Cryptic Pocket in β-lactamase Increases Penicillinase Activity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.14.439842

N/A

0DataRank · unranked

2 citations

Upasana L. Mallimadugula, Sukrit Singh, Enrico Rennella, Thomas E. Frederick, Tairan Yuwen +4 more

A cryptic pocket in Ebola VP35 allosterically controls RNA binding

Biophysical Journal(2022)10.1016/j.bpj.2021.11.2561

N/A

0DataRank · unranked

5 citations

Thomas E. Frederick, Upasana L. Mallimadugula, Sukrit Singh, Neha Vithani, Maxwell I. Zimmerman +5 more

Apolipoprotein E4 has extensive conformational heterogeneity in lipid free and bound forms

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.02.478828

N/A

0DataRank · unranked

2 citations

Maxwell I. Zimmerman, Justin J. Miller, Upasana L. Mallimadugula, J. Jeremías Incicco, Debjit Roy +7 more

Apolipoprotein E4 has extensive conformational heterogeneity in lipid-free and lipid-bound forms

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2215371120

N/A

0DataRank · unranked

45 citations

Maxwell I. Zimmerman, Justin J. Miller, Upasana L. Mallimadugula, J. Jeremías Incicco, Debjit Roy +8 more

Accounting for Fast vs Slow Exchange in Single Molecule FRET Experiments Reveals Hidden Conformational States

Journal of Chemical Theory and Computation(2024)10.1021/acs.jctc.4c01068

N/A

0DataRank · unranked

9 citations

Upasana L. Mallimadugula, Maxwell I. Zimmerman, Melissa D. Stuchell‐Brereton, Andrea Soranno, Gregory R. Bowman +1 more

Opening and closing of a cryptic pocket in VP35 toggles it between two different RNA-binding modes

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.22.609218

N/A

0DataRank · unranked

1 citations

Matthew A. Cruz, Neha Vithani, Maxwell I. Zimmerman, Gregory R. Bowman, Upasana L. Mallimadugula

Opening and closing of a cryptic pocket in VP35 toggles it between two different RNA-binding modes

eLife(2025)10.7554/elife.104514.3

N/A

0DataRank · unranked

3 citations

Matthew A. Cruz, Neha Vithani, Maxwell I. Zimmerman, Gregory R. Bowman, Upasana L. Mallimadugula

Opening and closing of a cryptic pocket in VP35 toggles it between two different RNA-binding modes

eLife(2025)10.7554/elife.104514

N/A

0DataRank · unranked

1 citations

Matthew A. Cruz, Neha Vithani, Maxwell I. Zimmerman, Gregory R. Bowman, Upasana L. Mallimadugula