Bruce E. Johnson

MedicineBiochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

25.2Author DataRank

Indexed papers

8in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 8 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Comprehensive genomic characterization of squamous cell lung cancers

Nature(2012)10.1038/nature11404

Top 1%

11.0DataRank

Top 1%4036 citations

Gad Getz, Stephen E. Schumacher, Petar Stojanov, Chang‐Jiun Wu, Hailei Zhang +326 more

Papers

Driven by 61 papers — median percentile 81. Top paper: “Comprehensive genomic characterization of squamous cell lung cancers”.

Comprehensive genomic characterization of squamous cell lung cancers

Nature(2012)10.1038/nature11404

Top 1%

11.0DataRank

Top 1%4036 citations

Gad Getz, Stephen E. Schumacher, Petar Stojanov, Chang‐Jiun Wu, Hailei Zhang +326 more

Multimodal pooled Perturb-CITE-seq screens in patient models define mechanisms of cancer immune evasion

Nature Genetics(2021)10.1038/s41588-021-00779-1

N/A

6.5DataRank · unranked

271 citations

Johannes C. Melms, Pratiksha I. Thakore, Kathryn Geiger-Schuller, Patricia Ho, Adrienne Luoma +17 more

The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution

Cell(2020)10.1016/j.cell.2020.03.053

Top 4%

5.6DataRank

Top 4%609 citations

Aviv Regev, Philipp Oberdoerffer, Tal Nawy, Anna Hupalowska, Jennifer E. Rood +92 more

A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors

Nature Medicine(2020)10.1038/s41591-020-0844-1

Top 4%

5.6DataRank

Top 4%819 citations

Caroline B. M. Porter, Orr Ashenberg, Julia Waldman, Eugene Drokhlyansky, Isaac Wakiro +45 more

A single-cell and single-nucleus RNA-seq toolbox for fresh and frozen human tumors

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/761429

N/A

2.5DataRank · unranked

68 citations

Orr Ashenberg, Julia Waldman, Eugene Drokhlyansky, Isaac Wakiro, Indresh Singh +44 more

Ultrasensitive Detection of Circulating LINE-1 ORF1p as a Specific Multicancer Biomarker

Cancer Discovery(2023)10.1158/2159-8290.cd-23-0313

N/A

1.7DataRank · unranked

85 citations

Connie Wu, Peter C. Fridy, Stephanie J. Zhang, Yasmeen Senussi, Justina C. Wolters +54 more

Concurrent osimertinib plus gefitinib for first-line treatment of EGFR-mutated non-small cell lung cancer (NSCLC).

Journal of Clinical Oncology(2020)10.1200/jco.2020.38.15_suppl.9507

N/A

1.5DataRank · unranked

39 citations

Daniel B. Costa, Cloud P. Paweletz, Mark M. Awad, Paul Marcoux, Deepa Rangachari +13 more

EGFR Mutations in Lung Cancer: Correlation with Clinical Response to Gefitinib Therapy

Science(2004)10.1126/science.1099314

N/A

1.4DataRank · unranked

9384 citations

Pasi A. Jänne, Jeffrey C. Lee, Sean Tracy, Heidi Greulich, Anthony Philippakis +13 more

A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features

Nature Medicine(2024)10.1038/s41591-024-03215-z

Top 15%

1.3DataRank

Top 15%91 citations

Daniel L. Abravanel, Åsa Segerstolpe, Timothy R. Blosser, Yury Goltsev, Yi Cui +57 more

Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses

Proceedings of the National Academy of Sciences(2001)10.1073/pnas.191502998

N/A

1.2DataRank · unranked

2583 citations

William G. Richards, Jane Staunton, Cheng Li, Stefano Monti, Priya Vasa +16 more

Spatially organized multicellular immune hubs in human colorectal cancer

Cell(2021)10.1016/j.cell.2021.08.003

N/A

1.0DataRank · unranked

787 citations

Matan Hofree, Siranush Sarkizova, Joshua D. Pirl, Vjola Jorgji, Alborz Bejnood +73 more

The tumor microenvironment drives transcriptional phenotypes and their plasticity in metastatic pancreatic cancer

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.25.256214

N/A

0.986DataRank · unranked

10 citations

Peter Winter, Andrew W. Navia, Hannah L. Williams, Alan DenAdel, Radha L. Kalekar +36 more

Microenvironment drives cell state, plasticity, and drug response in pancreatic cancer

Cell(2021)10.1016/j.cell.2021.11.017

N/A

0.959DataRank · unranked

597 citations

Peter Winter, Andrew W. Navia, Hannah L. Williams, Alan DenAdel, Kristen E. Lowder +42 more

A single-cell landscape of high-grade serous ovarian cancer

Nature Medicine(2020)10.1038/s41591-020-0926-0

N/A

0.938DataRank · unranked

518 citations

Itay Tirosh, Elizabeth H. Stover, Isaac Wakiro, Michael S. Cuoco, Idan Alter +30 more

Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems

Science(2021)10.1126/science.aax2656

N/A

0.902DataRank · unranked

408 citations

Daniel R. Goodwin, Anubhav Sinha, Asmamaw T. Wassie, Fei Chen, Evan R. Daugharthy +164 more

A spatial cell atlas of neuroblastoma reveals developmental, epigenetic and spatial axis of tumor heterogeneity

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.07.574538

Top 22%

0.898DataRank

Top 22%34 citations

Orr Ashenberg, Natalie B. Collins, Åsa Segerstolpe, Sizun Jiang, Michal Slyper +53 more

Performance of a Machine Learning Algorithm Using Electronic Health Record Data to Identify and Estimate Survival in a Longitudinal Cohort of Patients With Lung Cancer

JAMA Network Open(2021)10.1001/jamanetworkopen.2021.14723

N/A

0.686DataRank · unranked

96 citations

Tianrun Cai, Chuan Hong, Mulong Du, Bruce E. Johnson, Michael Lanuti +3 more

Surgical results of the Lung Cancer Mutation Consortium 3 trial: A phase II multicenter single-arm study to investigate the efficacy and safety of atezolizumab as neoadjuvant therapy in patients with stages IB-select IIIB resectable non–small cell lung cancer

Journal of Thoracic and Cardiovascular Surgery(2022)10.1016/j.jtcvs.2022.10.007

N/A

0.568DataRank · unranked

43 citations

Alan Nicholas, G. Alexander Patterson, Salama N. Waqar, Eric M. Toloza, Eric B. Haura +24 more

Acquiring tissue for advanced lung cancer diagnosis and comprehensive biomarker testing: A National Lung Cancer Roundtable best‐practice guide

CA A Cancer Journal for Clinicians(2023)10.3322/caac.21774

N/A

0.553DataRank · unranked

39 citations

Mizuki Nishino, Raymond U. Osarogiagbon, M. Patricia Rivera, Lauren Rosenthal, Robert A. Smith +5 more

The impact of human EGFR kinase domain mutations on lung tumorigenesis and in vivo sensitivity to EGFR-targeted therapies

UNC Libraries(2021)10.17615/6prg-vp52

N/A

0.546DataRank · unranked

37 citations

Hongbin Ji, Norman E. Sharpless, Pasi A. Jänne, Mitchell Albert, Daniel G. Tenen +16 more

Impact of TMB/PD-L1 expression and pneumonitis on chemoradiation and durvalumab response in stage III NSCLC

Nature Communications(2023)10.1038/s41467-023-39874-8

N/A

0.515DataRank · unranked

30 citations

Biagio Ricciuti, Xinan Wang, Federica Pecci, Alessandro Di Federico, Giuseppe Lamberti +13 more

Features of tumor-microenvironment images predict targeted therapy survival benefit in patients with EGFR-mutant lung cancer

Journal of Clinical Investigation(2023)10.1172/jci160330

N/A

0.464DataRank · unranked

21 citations

Ruichen Rong, Donghan M. Yang, Junya Fujimoto, Justin A. Bishop, Shirley Yan +15 more

Molecular profiling of 888 pediatric tumors informs future precision trials and data-sharing initiatives in pediatric cancer

Nature Communications(2024)10.1038/s41467-024-49944-0

Top 46%

0.400DataRank

Top 46%8 citations

Hersh Gupta, Abigail Ward, Yvonne Li, Duong Doan, Alyaa Al‐Ibraheemi +28 more

Multi-modal pooled Perturb-CITE-Seq screens in patient models define novel mechanisms of cancer immune evasion

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.01.267211

N/A

0.375DataRank · unranked

5 citations

Johannes C. Melms, Pratiksha I. Thakore, Kathryn R. Geiger-Schuller, Patricia Ho, Adrienne Luoma +15 more

A cellular and spatial atlas of TP53-associated tissue remodeling defines a multicellular tumor ecosystem in lung adenocarcinoma

Nature Cancer(2025)10.1038/s43018-025-01053-7

N/A

0.351DataRank · unranked

9 citations

Thinh T. Nguyen, Atharva Bhagwat, Akhil Kumar, Bruno Giotti, Benjamin Kepecs +29 more

A cellular and spatial atlas of TP53 -associated tissue remodeling in lung adenocarcinoma

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.28.546977

Top 50%

0.349DataRank

Top 50%5 citations

Benjamin Kepecs, Navin R. Mahadevan, Jason L. Weirather, Naomi R. Besson, Bruno Giotti +19 more

Alectinib combined with cobimetinib in ALK-Rearranged lung Cancer: A phase IB study

Lung Cancer(2024)10.1016/j.lungcan.2024.108003

N/A

0.349DataRank · unranked

8 citations

Alissa J. Cooper, Bruce E. Johnson, Justin F. Gainor, W. Marston Linehan, Lecia V. Sequist +6 more

Multi-institutional analysis of aneuploidy and outcomes to chemoradiation and durvalumab in stage III non-small cell lung cancer

Journal for ImmunoTherapy of Cancer(2023)10.1136/jitc-2023-007618

N/A

0.330DataRank · unranked

8 citations

Adam Price, Allison L. Richards, Biagio Ricciuti, Xinan Wang, Arielle Elkrief +14 more

Factors Associated with Disease Progression after Discontinuation of Immune Checkpoint Inhibitors for Immune-Related Toxicity in Patients with Advanced Non–Small Cell Lung Cancer

Clinical Cancer Research(2025)10.1158/1078-0432.ccr-24-2990

N/A

0.312DataRank · unranked

7 citations

Rohit Thummalapalli, Stephanie Alden, Biagio Ricciuti, Joao V. Alessi, Arielle Elkrief +18 more

Multicellular immune hubs and their organization in MMRd and MMRp colorectal cancer

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.30.426796

N/A

0.297DataRank · unranked

4 citations

Matan Hofree, Jonathan Chen, Siranush Sarkizova, Joshua D. Pirl, Vjola Jorgji +71 more

Molecular characterization of HER2-negative breast cancers reveals a distinct patient subgroup with 17q12 deletion and heterozygous loss of ERBB2

ESMO Open(2025)10.1016/j.esmoop.2024.104111

N/A

0.282DataRank · unranked

5 citations

P. Tarantino, Rong Li, Albert Grinshpun, Hersh Gupta, Melissa E. Hughes +12 more

Additional impact of genetic ancestry over race/ethnicity to prevalence of KRAS mutations and allele-specific subtypes in non-small cell lung cancer

Human Genetics and Genomics Advances(2024)10.1016/j.xhgg.2024.100320

N/A

0.269DataRank · unranked

5 citations

Kangcheng Hou, Biagio Ricciuti, Joao V. Alessi, Xihao Li, Federica Pecci +8 more

Tumor volume dynamics and tumor growth rate in ALK-rearranged advanced non-small-cell lung cancer treated with crizotinib

European Journal of Radiology Open(2020)10.1016/j.ejro.2019.12.004

N/A

0.269DataRank · unranked

5 citations

Tomoyuki Hida, Sasha Kravets, Suzanne E. Dahlberg, Christine Lydon, Hiroto Hatabu +3 more

Germline testing data validate inferences of mutational status for variants detected from tumor-only sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.14.439855

N/A

0.241DataRank · unranked

4 citations

Israel Gomy, Samantha Stokes, Alexander Gusev, Bruce E. Johnson, Neal I. Lindeman +5 more

Single-cell RNA-sequencing and -imaging of melanoma ecosystems reveals sources of resistance to immune checkpoint blockade.

Journal of Clinical Oncology(2018)10.1200/jco.2018.36.15_suppl.3074

N/A

0.208DataRank · unranked

1 citations

Livnat Jerby-Arnon, Asaf Rotem, Parin Shah, David Liu, Gao Zhang +13 more

Development and validation of a novel EHR-based tumor progression outcome to support biomarker discovery.

Journal of Clinical Oncology(2020)10.1200/jco.2020.38.15_suppl.e19297

N/A

0.199DataRank · unranked

2 citations

Michael J. Hassett, Katherine A. Stafford, Wenxin Xu, Bruce E. Johnson, Deborah Schrag +1 more

Author Correction: A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features

Nature Medicine(2025)10.1038/s41591-025-03665-z

N/A

0.104DataRank · unranked

1 citations

Daniel L. Abravanel, Åsa Segerstolpe, Timothy R. Blosser, Yury Goltsev, Yi Cui +57 more

Genomic profiling of breast cancer brain metastases reveals targetable alterations.

Journal of Clinical Oncology(2020)10.1200/jco.2020.38.15_suppl.2525

N/A

0.104DataRank · unranked

1 citations

Liam F. Spurr, Melissa E. Hughes, Yvonne Y. Li, José Pablo Leone, Ana C. Garrido-Castro +8 more

HTAPP_Dissociation of human metastatic breast cancer core needle biopsy to a single-cell suspension for single-cell RNA-seq v1

(2019)10.17504/protocols.io.4j7gurn

N/A

0DataRank · unranked

0 citations

Julia Waldman, Jingyi Wu, Abhay Kanodia, Sébastien Vigneau, Asaf Rotem +5 more

Smoking History as a Potential Predictor of Immune Checkpoint Inhibitor Efficacy in Metastatic Non-Small Cell Lung Cancer

JNCI Journal of the National Cancer Institute(2021)10.1093/jnci/djab116

N/A

0DataRank · unranked

68 citations

Biagio Ricciuti, Joao V. Alessi, Tom Nguyen, Mark M. Awad, Xihong Lin +3 more

HTAPP_Dissociation of human primary lung cancer resection to a single-cell suspension for single-cell RNA-seq v2

(2020)10.17504/protocols.io.bhbgj2jw

N/A

0DataRank · unranked

0 citations

Avinash Waghray, Julia Waldman, Isaac Wakiro, Mei-Ju Su, Sébastien Vigneau +6 more

Knowledge and Practice Patterns Among Pulmonologists for Molecular Biomarker Testing in Advanced Non-small Cell Lung Cancer

CHEST Journal(2021)10.1016/j.chest.2021.06.027

N/A

0DataRank · unranked

30 citations

James R. Jett, Upal Basu Roy, Bruce E. Johnson, Jennifer C. King, Nikki A. Martin +6 more

HTAPP_Dissociation of primary neuroblastoma resection to a single-cell suspension for single-cell RNA-seq (using papain, density gradient, and optionally ACK) v1

(2021)10.17504/protocols.io.brvnm65e

N/A

0DataRank · unranked

0 citations

Jingyi Wu, Michal Slyper, Sébastien Vigneau, Asaf Rotem, Orit Rozenblatt–Rosen +4 more

HTAPP_Dissociation of human primary lung cancer resection to a single-cell suspension for single-cell RNA-seq v1

(2019)10.17504/protocols.io.4j8gurw

N/A

0DataRank · unranked

0 citations

Avinash Waghray, Julia Waldman, Isaac Wakiro, Mei-Ju Su, Sébastien Vigneau +6 more

HTAPP_Dissociation of human metastatic breast cancer core needle biopsy to a single-cell suspension for single-cell RNA-seq v2

(2020)10.17504/protocols.io.bhbjj2kn

N/A

0DataRank · unranked

0 citations

Julia Waldman, Jingyi Wu, Abhay Kanodia, Sébastien Vigneau, Asaf Rotem +4 more

HTAPP_Test protocol__Dissociation of primary neuroblastoma resection to a single-cell suspension for single-cell RNA-seq (using collagenase 4) v1

(2021)10.17504/protocols.io.btd7ni9n

N/A

0DataRank · unranked

0 citations

Michal Slyper, Sébastien Vigneau, Asaf Rotem, Orit Rozenblatt–Rosen, Prisca Liberali +3 more

HTAPP_Dissociation of human ovarian cancer resection to a single-cell suspension for single-cell RNA-seq v1

(2019)10.17504/protocols.io.4kaguse

N/A

0DataRank · unranked

0 citations

Sara Napolitano, Jingyi Wu, Sébastien Vigneau, Asaf Rotem, Orit Rozenblatt–Rosen +4 more

HTAPP_Processing human ovarian cancer ascites to a single-cell suspension for single-cell RNA-seq v2

(2020)10.17504/protocols.io.bhbkj2kw

N/A

0DataRank · unranked

0 citations

Parin Shah, Mei-Ju Su, Isaac Wakiro, Sara Napolitano, Jingyi Wu +7 more

Data from Mutations in BRAF and KRAS Converge on Activation of the Mitogen-Activated Protein Kinase Pathway in Lung Cancer Mouse Models

(2023)10.1158/0008-5472.c.6495762

N/A

0DataRank · unranked

0 citations

Zhenxiong Wang, Samanthi A. Perera, Danan Li, Mei‐Chih Liang, Sara Zaghlul +15 more

Data from Mutations in BRAF and KRAS Converge on Activation of the Mitogen-Activated Protein Kinase Pathway in Lung Cancer Mouse Models

(2023)10.1158/0008-5472.c.6495762.v1

N/A

0DataRank · unranked

0 citations

Zhenxiong Wang, Samanthi A. Perera, Danan Li, Mei‐Chih Liang, Sara Zaghlul +15 more

Data from Association between Smoking History and Tumor Mutation Burden in Advanced Non–Small Cell Lung Cancer

(2023)10.1158/0008-5472.c.6513225.v1

N/A

0DataRank · unranked

0 citations

Biagio Ricciuti, Tom C. Nguyen, Xihao Li, Michael S. Rabin, Mark M. Awad +4 more

Data from A Novel, Highly Sensitive Antibody Allows for the Routine Detection of ALK-Rearranged Lung Adenocarcinomas by Standard Immunohistochemistry

(2023)10.1158/1078-0432.c.6518359.v1

N/A

0DataRank · unranked

0 citations

Lucian R. Chirieac, Kenny Law, Jason L. Hornick, Neal I. Lindeman, Eugene J. Mark +6 more

The American Cancer Society National Lung Cancer Roundtable strategic plan: Advancing comprehensive biomarker testing in non–small cell lung cancer

Cancer(2024)10.1002/cncr.34628

N/A

0DataRank · unranked

11 citations

Raymond U. Osarogiagbon, Farhood Farjah, James R. Jett, Bruce E. Johnson, M. Patricia Rivera +4 more

BRIDGE- HTAPP_Depletion of CD45+ cells from ovarian cancer ascites single cell suspensions for single-cell RNA-Seq v1

(2019)10.17504/protocols.io.4cqgsvw

N/A

0DataRank · unranked

0 citations

Parin Shah, Mei-Ju Su, Isaac Wakiro, Sara Napolitano, Jingyi Wu +7 more

HTAPP_Dissociation of primary neuroblastoma core needle biopsy to a single-cell suspension for single-cell RNA-seq (using papain, density gradient, and optionally ACK) v1

(2020)10.17504/protocols.io.bkgnktve

N/A

0DataRank · unranked

0 citations

Jingyi Wu, Michal Slyper, Sébastien Vigneau, Asaf Rotem, Orit Rozenblatt–Rosen +4 more

HTAPP_Enrichment of EpCAM+ cells from single-cell suspension for single-cell RNA-seq v1

(2021)10.17504/protocols.io.bucfnstn

N/A

0DataRank · unranked

0 citations

Sara Napolitano, Sébastien Vigneau, Asaf Rotem, Orit Rozenblatt–Rosen, Prisca Liberali +3 more

HTAPP_Dissociation of human metastatic breast cancer lymph node excision biopsy to a single-cell suspension for single-cell RNA-seq (using Collagenase 4 and Dispase II) v1

(2021)10.17504/protocols.io.bua9nsh6

N/A

0DataRank · unranked

0 citations

Jingyi Wu, Sébastien Vigneau, Michal Slyper, Asaf Rotem, Orit Rozenblatt–Rosen +4 more

HTAPP_Designing gene panels for metastatic breast cancer targeted spatial transcriptomics assays v1

(2021)10.17504/protocols.io.bw83phyn

Top 100%

0DataRank

Top 100%0 citations

Nikhil Wagle, Orit Rozenblatt–Rosen, Prisca Liberali, Daniel L. Abravanel, Bruce E. Johnson +2 more

HTAPP_Test protocol_Dissociation of primary neuroblastoma resection to a single-cell suspension for single-cell RNA-seq (using papain and ACK) v1

(2021)10.17504/protocols.io.brvqm65w

N/A

0DataRank · unranked

0 citations

Jingyi Wu, Michal Slyper, Sébastien Vigneau, Asaf Rotem, Orit Rozenblatt–Rosen +4 more

HTAPP_Designing gene panels for neuroblastoma targeted spatial transcriptomics assays v1

(2021)10.17504/protocols.io.bw86phze

N/A

0DataRank · unranked

0 citations

Orr Ashenberg, Anand G. Patel, Natalie Collins, Xiaowei Zhuang, Orit Rozenblatt–Rosen +6 more

HTAPP_Processing human ovarian cancer ascites to a single-cell suspension for single-cell RNA-seq v1

(2019)10.17504/protocols.io.4kbgusn

N/A

0DataRank · unranked

0 citations

Parin Shah, Mei-Ju Su, Isaac Wakiro, Sara Napolitano, Jingyi Wu +7 more

Bruce E. Johnson

Indexed papers

Top data-sharing exemplar

Papers