Nicolas Coudray

Also affiliated with New York University

Computer ScienceMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 27 papers. Top paper: “LetB Structure Reveals a Tunnel for Lipid Transport across the Bacterial Envelope”.

LetB Structure Reveals a Tunnel for Lipid Transport across the Bacterial Envelope

Cell(2020)10.1016/j.cell.2020.03.030

N/A

2.2DataRank · unranked

70 citations

Nicolas Coudray, Mark R. MacRae, C.T. McManus, Damian C. Ekiert, Gira Bhabha +1 more

Structure of MlaFB uncovers novel mechanisms of ABC transporter regulation

eLife(2020)10.7554/elife.60030

N/A

1.5DataRank · unranked

44 citations

Ya‐Ting Chang, Nicolas Coudray, Sabrina I. Giacometti, Mark R. MacRae, Georgia L. Isom +4 more

Deep Learning and Pathomics Analyses Reveal Cell Nuclei as Important Features for Mutation Prediction of BRAF-Mutated Melanomas

Journal of Investigative Dermatology(2021)10.1016/j.jid.2021.09.034

N/A

1.4DataRank · unranked

49 citations

Sofia Nomikou, Nicolas Coudray, George Jour, Zarmeena Dawood, Runyu Hong +15 more

Structure of bacterial phospholipid transporter MlaFEDB with substrate bound

eLife(2020)10.7554/elife.62518

N/A

0.657DataRank · unranked

79 citations

Georgia L. Isom, Mark R. MacRae, Mariyah N. Saiduddin, Gira Bhabha, Damian C. Ekiert +1 more

Blueprinting extendable nanomaterials with standardized protein blocks

Nature(2024)10.1038/s41586-024-07188-4

N/A

0.624DataRank · unranked

63 citations

Yang Hsia, Ryan D. Kibler, Jinwei Xu, Neville P. Bethel, Deepesh Nagarajan +27 more

Structure and mechanism of the bacterial lipid ABC transporter, MlaFEDB

Current Opinion in Structural Biology(2022)10.1016/j.sbi.2022.102429

N/A

0.483DataRank · unranked

24 citations

Nicolas Coudray, Gira Bhabha, Damian C. Ekiert

Role of Ring6 in the Function of the E. coli MCE Protein LetB

Journal of Molecular Biology(2022)10.1016/j.jmb.2022.167463

N/A

0.369DataRank · unranked

7 citations

Nicolas Coudray, Georgia L. Isom, Gira Bhabha, Damian C. Ekiert, Casey Vieni

Self supervised artificial intelligence predicts poor outcome from primary cutaneous squamous cell carcinoma at diagnosis

npj Digital Medicine(2025)10.1038/s41746-025-01496-3

N/A

0.345DataRank · unranked

9 citations

Michelle C. Juarez, Maressa C. Criscito, Adalberto Claudio Quiros, Reason Wilken, Stephanie R. Jackson +20 more

Structure of MlaFB uncovers novel mechanisms of ABC transporter regulation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.27.064196

N/A

0.269DataRank · unranked

5 citations

Ya‐Ting Chang, Nicolas Coudray, Sabrina I. Giacometti, Mark R. MacRae, Georgia L. Isom +4 more

Conformational states of the microtubule nucleator, the γ-tubulin ring complex

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.19.572162

N/A

0.241DataRank · unranked

4 citations

Sophie M. Travis, Brian P. Mahon, C.T. McManus, Philip D. Jeffrey, Nicolas Coudray +6 more

MetFinder: A Tool for Automated Quantitation of Metastatic Burden in Histological Sections From Preclinical Models

Pigment Cell & Melanoma Research(2024)10.1111/pcmr.13195

N/A

0.104DataRank · unranked

1 citations

Nicolas Coudray, Erol C. Bayraktar, Kristyn Galbraith, George Jour, Arman Alberto Sorin Shadaloey +15 more

The validity of a machine learning algorithm in predicting response to immune checkpoint inhibitors in melanoma.

Journal of Clinical Oncology(2023)10.1200/jco.2023.41.16_suppl.9523

N/A

0.104DataRank · unranked

1 citations

Nicolas Coudray, George Jour, Clara Goldberg, Paul Johannet, Alexander C. Huang +6 more

Inflammation in the tumor-adjacent lung as a predictor of clinical outcome in lung adenocarcinoma

Nature Communications(2023)10.1038/s41467-023-42327-x

N/A

0DataRank · unranked

29 citations

Hua Zhou, Nina Murrell, Hortense Le, Theodore Sakellaropoulos, Nicolas Coudray +35 more

Protein–protein interactions in the Mla lipid transport system probed by computational structure prediction and deep mutational scanning

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.104744

N/A

0DataRank · unranked

25 citations

Dhenesh Puvanendran, Max A. B. Haase, Nicolas Coudray, Ljuvica Kolich, Cherry Lam +4 more

Unlatching of the stem domains in the Staphylococcus aureus pore-forming leukocidin LukAB influences toxin oligomerization

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.105321

N/A

0DataRank · unranked

1 citations

Sofya S. Perelman, Maria C. Panepinto, Irnov Irnov, Nicolas Coudray, Nora M. Samhadaneh +6 more

Blueprinting expandable nanomaterials with standardized protein building blocks

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.09.544258

N/A

0DataRank · unranked

6 citations

Yang Hsia, Ryan D. Kibler, Jinwei Xu, Neville P. Bethel, Deepesh Nagarajan +26 more

Self-supervised artificial intelligence predicts recurrence, metastasis and disease specific death from primary cutaneous squamous cell carcinoma at diagnosis

Research Square(2023)10.21203/rs.3.rs-3607399/v1

N/A

0DataRank · unranked

3 citations

Nicolas Coudray, Michelle C. Juarez, Maressa C. Criscito, Adalberto Claudio Quiros, Reason Wilken +13 more

Mapping the landscape of histomorphological cancer phenotypes using self-supervised learning on unannotated pathology slides

Nature Communications(2024)10.1038/s41467-024-48666-7

N/A

0DataRank · unranked

64 citations

Nicolas Coudray, Anna H. Yeaton, Xinyu Yang, Bojing Liu, Hortense Le +11 more

Self-Supervised Learning Reveals Clinically Relevant Histomorphological Patterns for Therapeutic Strategies in Colon Cancer

ENLIGHTEN (Jurnal Bimbingan dan Konseling Islam)(2024)10.1101/2024.02.26.582106

N/A

0DataRank · unranked

8 citations

Meaghan Polack, Nicolas Coudray, Adalberto Claudio Quiros, Theodore Sakellaropoulos, A. Stijn L. P. Crobach +6 more

Bond-centric modular design of protein assemblies

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.11.617872

N/A

0DataRank · unranked

1 citations

Andrew Favor, Ryan D. Kibler, Joshua M. Lubner, Andrew J. Borst, Nicolas Coudray +10 more

Bond-centric modular design of protein assemblies

Nature Materials(2025)10.1038/s41563-025-02297-5

N/A

0DataRank · unranked

19 citations

Andrew Favor, Ryan D. Kibler, Joshua M. Lubner, Andrew J. Borst, Nicolas Coudray +11 more

Artificial Intelligence Algorithm Predicts Response to Immune Checkpoint Inhibitors

Clinical Cancer Research(2025)10.1158/1078-0432.ccr-24-3720

N/A

0DataRank · unranked

6 citations

Nicolas Coudray, George Jour, Milad Ibrahim, Irineu Illa-Bochaca, Shi Qiu +8 more

Targeting allostery in the Dynein motor domain with small molecule inhibitors

Cell chemical biology(2021)10.1016/j.chembiol.2021.04.024

N/A

0DataRank · unranked

6 citations

Keith J. Mickolajczyk, Jonathan B. Steinman, L. Urnavicius, Nan Chen, Yasuhiro Hirata +6 more

Structure of bacterial phospholipid transporter MlaFEDB with substrate bound

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.02.129247

N/A

0DataRank · unranked

8 citations

Georgia L. Isom, Mark R. MacRae, Mariyah N. Saiduddin, Gira Bhabha, Damian C. Ekiert +1 more

Targeting Allostery in the Dynein Motor Domain with Small Molecule Inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.22.308700

N/A

0DataRank · unranked

3 citations

Keith J. Mickolajczyk, Jonathan B. Steinman, L. Urnavicius, Nan Chen, Yasuhiro Hirata +6 more

Inflammation in the tumor-adjacent lung as a predictor of clinical outcome in lung adenocarcinoma

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.10.516003

N/A

0DataRank · unranked

3 citations

Hua Zhou, Nina Shenker-Tauris, Hortense Le, Theodore Sakellaropoulos, Nicolas Coudray +32 more

Protein-protein interactions in the Mla lipid transport system probed by computational structure prediction and deep mutational scanning

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.09.519820

N/A

0DataRank · unranked

1 citations

Dhenesh Puvanendran, Max A. B. Haase, Nicolas Coudray, Ljuvica Kolich, Cherry Lam +4 more