Fred Kolling

Also affiliated with Dartmouth Institute for Health Policy and Clinical Practice, Dartmouth Psychiatric Research Center, Dartmouth Hospital, Dartmouth Cancer Center

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 6%percentile

0.317Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Identifying tumor type and cell type-specific gene expression alterations in pediatric central nervous system tumors

Nature Communications(2024)10.1038/s41467-024-47712-8

Top 53%

0.317DataRank

Top 53%5 citations

Nasim Azizgolshani, Joshua A. Shapiro, Lananh Nguyen, Fred Kolling, George Zanazzi +3 more

Papers

Driven by 50 papers — median percentile 47. Top paper: “Alternating 17β-Estradiol and Aromatase Inhibitor Therapies Is Efficacious in Postmenopausal Women with Advanced Endocrine-Resistant ER+ Breast Cancer”.

Alternating 17β-Estradiol and Aromatase Inhibitor Therapies Is Efficacious in Postmenopausal Women with Advanced Endocrine-Resistant ER+ Breast Cancer

Clinical Cancer Research(2023)10.1158/1078-0432.ccr-23-0112

N/A

0.523DataRank · unranked

8 citations

Peter A. Kaufman, Karthik V. Giridhar, Jonathan D. Marotti, Mary D. Chamberlin, Bradley A. Arrick +7 more

The endogenous antigen-specific CD8+ T cell repertoire is composed of unbiased and biased clonotypes with differential fate commitments

Immunity(2025)10.1016/j.immuni.2025.02.001

N/A

0.452DataRank · unranked

11 citations

Francesco E. Emiliani, Chinmay Vaidya, Hannah T. Stuart, Shawn C. Musial, Fred Kolling +7 more

Identifying tumor type and cell type-specific gene expression alterations in pediatric central nervous system tumors

Nature Communications(2024)10.1038/s41467-024-47712-8

Top 53%

0.317DataRank

Top 53%5 citations

Nasim Azizgolshani, Joshua A. Shapiro, Lananh Nguyen, Fred Kolling, George Zanazzi +3 more

Estrogen therapy induces receptor-dependent DNA damage enhanced by PARP inhibition in ER+ breast cancer

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.16.532956

N/A

0.189DataRank · unranked

2 citations

Gary N. Schwartz, Steven Tau, Amanda Jiang, Sarah R. Hosford, Abigail E. Goen +11 more

The Overlooked Role of Specimen Preparation in Bolstering Deep Learning-Enhanced Spatial Transcriptomics Workflows

medRxiv(2023)10.1101/2023.10.09.23296700

N/A

0.104DataRank · unranked

1 citations

Yunrui Lu, Alos Diallo, Gokul Raghavendra Srinivasan, Zarif Azher, Brock C. Christensen +8 more

Let-7b-5p in vesicles secreted by human airway cells reduces biofilm formation and increases antibiotic sensitivity of P. aeruginosa

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2105370118

N/A

0DataRank · unranked

61 citations

Amanda Nymon, BRUCE A. STANTON, Laura Bashor, Zhongyou Li, Thomas H. Hampton +8 more

High-plex expression profiling reveals that implants drive spatiotemporal protein production and innate immune activation for tissue repair

Acta Biomaterialia(2021)10.1016/j.actbio.2021.10.018

N/A

0DataRank · unranked

7 citations

Jason Reeves, Jingjing Gong, Fred Kolling, P. Jack Hoopes, Ulrike G. K. Wegst +1 more

ScRNA-seq expression of IFI27 and APOC2 identifies four alveolar macrophage superclusters in healthy BALF

Life Science Alliance(2022)10.26508/lsa.202201458

N/A

0DataRank · unranked

64 citations

Fred Kolling, Daniel Aridgides, Diane Mellinger, Alix Ashare, Claudia Jakubzick +1 more

ScRNA-seq Expression of IFI27 and APOC2 Identifies Four Alveolar Macrophage Superclusters in Healthy BALF

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.30.478325

N/A

0DataRank · unranked

14 citations

Fred Kolling, Daniel Aridgides, Diane Mellinger, Alix Ashare, Claudia Jakubzick +1 more

Identification of Spatial Proteomic Signatures of Colon Tumor Metastasis: A Digital Spatial Profiling Approach

medRxiv(2022)10.1101/2022.12.04.22283073

N/A

0DataRank · unranked

2 citations

John P. Zavras, Eren M. Veziroglu, Mustafa Nasir-Moin, Fred Kolling, Brock C. Christensen +10 more

Characterizing control of memory CD8 T cell differentiation by BTB-ZF transcription factor Zbtb20

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.22.504726

N/A

0DataRank · unranked

0 citations

Yasmin Kamal, Owen M. Williams, Chenyang Li, Fred Kolling, Heidi W. Trask +5 more

Inferring Spatially Resolved Transcriptomics Data from Whole Slide Images for the Assessment of Colorectal Tumor Metastasis: A Feasibility Study

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.24.517856

N/A

0DataRank · unranked

0 citations

Eric Feng, Cyril Sharma, Zarif Azher, Tarushii Goel, Ojas A. Ramwala +10 more

CCL5-producing migratory dendritic cells guide CCR5+ monocytes into the draining lymph nodes

The Journal of Experimental Medicine(2023)10.1084/jem.20222129

N/A

0DataRank · unranked

104 citations

Anita Tewari, Xin Li, Arlind B. Mara, W. T. King, Sophie L. Gibbings +5 more

Estrogen Therapy Induces Receptor-Dependent DNA Damage Enhanced by PARP Inhibition in ER+ Breast Cancer

Clinical Cancer Research(2023)10.1158/1078-0432.ccr-23-0488

N/A

0DataRank · unranked

19 citations

Gary N. Schwartz, Steven Tau, Alyssa M. Roberts, Amanda Jiang, Sarah R. Hosford +12 more

Inferring spatial transcriptomics markers from whole slide images to characterize metastasis-related spatial heterogeneity of colorectal tumors: A pilot study

Journal of Pathology Informatics(2023)10.1016/j.jpi.2023.100308

N/A

0DataRank · unranked

23 citations

Eric Feng, Cyril Sharma, Zarif Azher, Tarushii Goel, Ojas A. Ramwala +10 more

Identification of Spatial Proteomic Signatures of Colon Tumor Metastasis

American Journal Of Pathology(2023)10.1016/j.ajpath.2023.02.020

N/A

0DataRank · unranked

21 citations

John P. Zavras, Eren M. Veziroglu, Mustafa Nasir-Moin, Fred Kolling, Brock C. Christensen +10 more

Neoadjuvant Intratumoral Immunotherapy with Cowpea Mosaic Virus Induces Local and Systemic Antitumor Efficacy in Canine Mammary Cancer Patients

Cells(2023)10.3390/cells12182241

N/A

0DataRank · unranked

19 citations

Daniel Alonso‐Miguel, María Dolores Pérez Alenza, Anna Barbara Emilia Zimmermann, Evelien Schaafsma, Fred Kolling +11 more

Characterizing control of memory CD8 T cell differentiation by BTB-ZF transcription factor Zbtb20

Life Science Alliance(2023)10.26508/lsa.202201683

N/A

0DataRank · unranked

6 citations

Yasmin Kamal, Owen M. Wilkins, Chenyang Li, Fred Kolling, Heidi W. Trask +5 more

Potential to Enhance Large Scale Molecular Assessments of Skin Photoaging through Virtual Inference of Spatial Transcriptomics from Routine Staining

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.30.551188

N/A

0DataRank · unranked

7 citations

Matthew Davis, Matthew LeBoeuf, Michael Fatemi, Zarif Azher, Yunrui Lu +12 more

Pharmacological Induction of mesenchymal-epithelial transition chemosensitizes breast cancer cells and prevents metastatic progression

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.19.537586

N/A

0DataRank · unranked

5 citations

Gadisti A. Mohamed, Mohammed Ashick, Mohamed Ashick Mohamed Saleem, Nevena B. Ognjenovic, Hanxu Lu +10 more

Coordinated Chemokine Expression Defines Macrophage Subsets Across Tissues

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.12.540435

N/A

0DataRank · unranked

5 citations

Arlind B. Mara, Shawn C. Musial, Kavita Rawat, W. T. King, Fred Kolling +3 more

Spatial Omics Driven Crossmodal Pretraining Applied to Graph-based Deep Learning for Cancer Pathology Analysis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.30.551187

N/A

0DataRank · unranked

5 citations

Michael Fatemi, Yunrui Lu, Gokul Raghavendra Srinivasan, Alos Diallo, Brock C. Christensen +7 more

Feasibility of Inferring Spatial Transcriptomics from Single-Cell Histological Patterns for Studying Colon Cancer Tumor Heterogeneity

medRxiv(2023)10.1101/2023.10.09.23296701

N/A

0DataRank · unranked

4 citations

Yunrui Lu, Cyril Sharma, Eric Feng, Zarif Azher, Alos Diallo +12 more

Resident memory T cell precursors in tumor draining lymph nodes require type-1 IFN for optimal differentiation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.02.551658

N/A

0DataRank · unranked

2 citations

Tyler G. Searles, Jichang Han, Cameron Messier, Neeti Mittal, Aaron Hawkes +8 more

Hydroxymethylation alterations in progenitor-like cell types of pediatric central nervous system tumors are associated with cell type-specific transcriptional changes

Research Square(2023)10.21203/rs.3.rs-2517758/v1

N/A

0DataRank · unranked

1 citations

Nasim Azizgolshani, Ze Zhang, Laurent Perreard, Fred Kolling, Lananh Nguyen +4 more

Coordinated chemokine expression defines macrophage subsets across tissues

Nature Immunology(2024)10.1038/s41590-024-01826-9

N/A

0DataRank · unranked

71 citations

Arlind B. Mara, Shawn C. Musial, Fred Kolling, Sophie L. Gibbings, Nikita Gerebtsov +2 more

Pharmacological induction of chromatin remodeling drives chemosensitization in triple-negative breast cancer

Cell Reports Medicine(2024)10.1016/j.xcrm.2024.101504

N/A

0DataRank · unranked

17 citations

Gadisti A. Mohamed, Mohammed Ashick Mohamed Saleem, Nevena B. Ognjenovic, Hanxu Lu, Fred Kolling +9 more

An Abscopal Effect on Lung Metastases in Canine Mammary Cancer Patients Induced by Neoadjuvant Intratumoral Immunotherapy with Cowpea Mosaic Virus Nanoparticles and Anti-Canine PD-1

Cells(2024)10.3390/cells13171478

N/A

0DataRank · unranked

11 citations

Juan Carlos Pinto‐Cardenas, Adhara Jaciel Arreguin Carrillo, Daniel Luna Dávalos, Marisa Daniela González Pérez, D. Lechuga +16 more

An initial game-theoretic assessment of enhanced tissue preparation and imaging protocols for improved deep learning inference of spatial transcriptomics from tissue morphology

Briefings in Bioinformatics(2024)10.1093/bib/bbae476

N/A

0DataRank · unranked

8 citations

Yunrui Lu, Alos Diallo, Gokul Raghavendra Srinivasan, Zarif Azher, Brock C. Christensen +8 more

Integrative co-registration of elemental imaging and histopathology for enhanced spatial multimodal analysis of tissue sections through TRACE

Bioinformatics Advances(2024)10.1093/bioadv/vbaf001

N/A

0DataRank · unranked

2 citations

Serin Han, Aruesha Srivastava, Neha Shaik, Matthew Chan, Alos Diallo +15 more

Associations in cell type-specific hydroxymethylation and transcriptional alterations of pediatric central nervous system tumors

Nature Communications(2024)10.1038/s41467-024-47943-9

N/A

0DataRank · unranked

2 citations

Nasim Azizgolshani, Ze Zhang, Laurent Perreard, Fred Kolling, Lananh Nguyen +4 more

Buckling instability underlies vertebral segmentation during axolotl tail regeneration

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.31.577464

N/A

0DataRank · unranked

7 citations

Tobias Gerber, Vijayishwer Singh Jamwal, Francisco José Calazans Falcón, Tom Deshayes, Riley Grindle +21 more

Endocrine persistence in ER+ breast cancer is accompanied by metabolic vulnerability in oxidative phosphorylation

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.26.615177

N/A

0DataRank · unranked

3 citations

Mary D. Chamberlin, Huijuan Yang, Jonathan D. Marotti, Alyssa M. Roberts, Melissa M. Carmichael +11 more

Integrative Co-Registration of Elemental Imaging and Histopathology for Enhanced Spatial Multimodal Analysis of Tissue Sections through TRACE

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.06.583819

N/A

0DataRank · unranked

1 citations

Ramsey Steiner, Serin Han, Aruesha Srivastava, Neha Shaik, Matthew Chan +10 more

Hierarchal single-cell lineage tracing reveals differential fate commitment of CD8 T-cell clones in response to acute infection

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.21.586160

N/A

0DataRank · unranked

1 citations

Francesco E. Emiliani, Chinmay Vaidya, Hannah T. Stuart, Fred Kolling, Margaret E. Ackerman +4 more

Oxidative Phosphorylation Is a Metabolic Vulnerability of Endocrine Therapy–Tolerant Persister Cells in ER+ Breast Cancer

Cancer Research(2025)10.1158/0008-5472.can-24-1204

N/A

0DataRank · unranked

17 citations

Mary D. Chamberlin, Huijuan Yang, Jonathan D. Marotti, Patricia C. Muskus, Alyssa M. Roberts +12 more

Integration of elemental imaging and spatial transcriptomic profiling for proof-of-concept metals-based pathway analysis of colon tumor microenvironment

Metallomics(2025)10.1093/mtomcs/mfaf034

N/A

0DataRank · unranked

1 citations

Neha Shaik, Yunrui Lu, Matthew Chan, Alos Diallo, John P. Zavras +15 more

A streamlined and comprehensive protocol for the generation and multi-omic analysis of human monocyte-derived macrophages

BMC Biotechnology(2025)10.1186/s12896-025-01071-4

N/A

0DataRank · unranked

1 citations

Laurent Perreard, Fred Kolling, Patricia A. Pioli, Brittany A. Goods, Olivia Palmer

Targeting pyruvate metabolism generates distinct CD8+ T cell responses to gammaherpesvirus and B lymphoma

JCI Insight(2025)10.1172/jci.insight.187680

N/A

0DataRank · unranked

1 citations

Young-Kwang Usherwood, Julie A. Reisz, Sukrut C. Kamerkar, Rachel Culp‐Hill, Owen M. Wilkins +9 more

Histology-Based Virtual RNA Inference Identifies Pathways Associated with Metastasis Risk in Colorectal Cancer

medRxiv(2025)10.1101/2025.04.22.25326170

N/A

0DataRank · unranked

1 citations

Minh‐Khang Le, Zarif Azher, Xiaoying Liu, Louis Vaickus, Harsimran Kaur +7 more

Anti-CD206 CAR T Cell Treatment Restores Fibrosis-Induced Loss of Dermal White Adipose Tissue

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.16.682860

N/A

0DataRank · unranked

1 citations

Asmaa O. Mohamed, Helen Jarnagin, Rajan Bhandari, Jason R. Gunn, Joana Murad-Mabaera +7 more

A streamlined and comprehensive protocol for the generation and multi-omic analysis of human monocyte-derived macrophages

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.30.655544

N/A

0DataRank · unranked

0 citations

Laurent Perreard, Fred Kolling, Patricia A. Pioli, Brittany A. Goods, Olivia Palmer

The Dichotomy of Tumor Control by Recruited and Resident Tumor-Associated Macrophages

Research Square(2025)10.21203/rs.3.rs-6977440/v1

N/A

0DataRank · unranked

0 citations

Soubhik Ghosh, Xin Li, Kavita Rawat, Aishwarya Dighal, Stephanie Kalinowski +3 more

Histology-Based Virtual RNA Inference Identifies Pathways Associated With Metastasis Risk in Colorectal Cancer

Modern Pathology(2025)10.1016/j.modpat.2025.100866

N/A

0DataRank · unranked

0 citations

Minh‐Khang Le, Zarif Azher, Xiaoying Liu, Louis Vaickus, Harsimran Kaur +7 more

Multisite Evaluation of Next-Generation Methods for Small RNA Quantification

Journal of Biomolecular Techniques JBT(2020)10.7171/jbt.20-3102-001

N/A

0DataRank · unranked

21 citations

Jyothi Thimmapuram, Shaojun Xie, Jamie P. Kershner, Fred Kolling, Carol S. Ringelberg +29 more

Resolving B cell migration from SpatialVDJ sequencing with GIBLE 3612

The Journal of Immunology(2025)10.1093/jimmun/vkaf283.1392

N/A

0DataRank · unranked

0 citations

Chinmay Vaidya, Jessie Fielding, Sherry Wu, Fred Kolling, Kevin C. O’Connor +2 more

Cross-Site Evaluation of Commercial Sanger Sequencing Chemistries

Journal of Biomolecular Techniques JBT(2020)10.7171/jbt.20-3103-002

N/A

0DataRank · unranked

3 citations

Lorena Pantano, Molly J. Zeller, Fred Kolling, Yanping Zhang, Yuriy O. Alekseyev +9 more

Genomic analysis of Cryaa -R49C and Cryab -R120G knockin mutant mice: 10-year follow-up

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.16.343186

N/A

0DataRank · unranked

0 citations

Carol S. Ringelberg, M E Wallace, Usha P. Andley, Fred Kolling

Resident memory CD8+ T cells in regional lymph nodes mediate immunity to metastatic melanoma

Immunity(2021)10.1016/j.immuni.2021.08.019

N/A

0DataRank · unranked

164 citations

Nikhil Khatwani, Jennifer L. Vella, Kathryn A. Lewis, Yanding Zhao, Jichang Han +19 more

Resident and circulating memory T cells persist for years in melanoma patients with durable responses to immunotherapy

Nature Cancer(2021)10.1038/s43018-021-00180-1

N/A

0DataRank · unranked

151 citations

Yanding Zhao, Keisuke Shirai, Aleksey Molodtsov, Fred Kolling, Jan L. Fisher +10 more

Fred Kolling

Indexed papers

Top data-sharing exemplar

Papers