Joseph D. Dougherty

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile

0.567Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A glial circadian gene expression atlas reveals cell type and disease-specific reprogramming in response to amyloid pathology or aging

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.28.596297

Top 41%

0.463DataRank

Top 41%12 citations

Stuart B. Fass, Darshan Sapkota, Sylvia Kang, Henry C. Hollis, Jennifer H. Lawrence +5 more

Papers

Driven by 65 papers — median percentile 41. Top paper: “DNMT3A Haploinsufficiency Results in Behavioral Deficits and Global Epigenomic Dysregulation Shared across Neurodevelopmental Disorders”.

DNMT3A Haploinsufficiency Results in Behavioral Deficits and Global Epigenomic Dysregulation Shared across Neurodevelopmental Disorders

Cell Reports(2020)10.1016/j.celrep.2020.108416

N/A

0.675DataRank · unranked

89 citations

Dennis Y. Wu, Jenna R. Martin, J. Russell Moore, Yiran R. Liu, Adam W. Clemens +8 more

The Neurotoxin DSP-4 Dysregulates the Locus Coeruleus-Norepinephrine System and Recapitulates Molecular and Behavioral Aspects of Prodromal Neurodegenerative Disease

eNeuro(2022)10.1523/eneuro.0483-22.2022

N/A

0.553DataRank · unranked

39 citations

Michael A. Kelberman, Daniel J. Lustberg, Anu Korukonda, Katharine E McCann, Bernard Mulvey +6 more

Transcriptional-regulatory convergence across functional MDD risk variants identified by massively parallel reporter assays

Translational Psychiatry(2021)10.1038/s41398-021-01493-6

N/A

0.477DataRank · unranked

23 citations

Joseph D. Dougherty, Bernard Mulvey

CLIP and Massively Parallel Functional Analysis of CELF6 Reveal a Role in Destabilizing Synaptic Gene mRNAs through Interaction with 3′ UTR Elements

Cell Reports(2020)10.1016/j.celrep.2020.108531

N/A

0.470DataRank · unranked

22 citations

Dana King, Haley Crosby, Yating Liu, Barak A. Cohen, Joseph D. Dougherty +1 more

A glial circadian gene expression atlas reveals cell type and disease-specific reprogramming in response to amyloid pathology or aging

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.28.596297

Top 41%

0.463DataRank

Top 41%12 citations

Stuart B. Fass, Darshan Sapkota, Sylvia Kang, Henry C. Hollis, Jennifer H. Lawrence +5 more

Visual Deprivation during Mouse Critical Period Reorganizes Network-Level Functional Connectivity

Journal of Neuroscience(2024)10.1523/jneurosci.1019-23.2024

N/A

0.417DataRank · unranked

11 citations

Rachel M. Rahn, Annie R. Bice, Seana H. Bice, Jonah A. Padawer-Curry, Keith B. Hengen +3 more

Cnih3Deletion Dysregulates Dorsal Hippocampal Transcription across the Estrous Cycle

eNeuro(2023)10.1523/eneuro.0153-22.2023

N/A

0.269DataRank · unranked

5 citations

Hannah E. Frye, Tania Lintz, Stuart B. Fass, Eric Tycksen, Elliot C. Nelson +3 more

Characterization of early markers of disease in the mouse model of mucopolysaccharidosis IIIB

Journal of Neurodevelopmental Disorders(2024)10.1186/s11689-024-09534-z

N/A

0.208DataRank · unranked

3 citations

Amanda Titus, Kate M Reardon, Sara Conyers, Joseph D. Dougherty, Xia Ge +5 more

Neurobehavioral Profiles and Clinical Consequences of MYT1L-Related Neurodevelopmental Disorder: Insights from the Brain Gene Registry

medRxiv(2025)10.64898/2025.12.01.25340510

Top 78%

0.104DataRank

Top 78%1 citations

Levi Kaster, Daleep Grewal, Allyson Schreiber, Anna M. Abbacchi, Virginia Lanzotti +5 more

A MYT1L Syndrome mouse model recapitulates patient phenotypes and reveals altered brain development due to disrupted neuronal maturation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.17.423095

N/A

0DataRank · unranked

9 citations

Mary E. Lambo, Xia Ge, Joshua T. Dearborn, Yating Liu, Katherine B. McCullough +11 more

DNMT3A haploinsufficiency results in behavioral deficits and global epigenomic dysregulation shared across neurodevelopmental disorders

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.10.195859

N/A

0DataRank · unranked

7 citations

Dennis Y. Wu, Jenna R. Martin, J. Russell Moore, Yiran R. Liu, Adam W. Clemens +7 more

Activity dependent translation in astrocytes dynamically alters the proteome of the perisynaptic astrocyte process

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.08.033027

N/A

0DataRank · unranked

6 citations

Mandy S. J. Kater, Kristina Sakers, Kayla R. Nygaard, Y. Liu, Allison M. Lake +8 more

Extended amygdala-parabrachial circuits alter threat assessment to regulate feeding

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.03.975193

N/A

0DataRank · unranked

4 citations

Andrew T. Luskin, Christian E. Pedersen, Bernard Mulvey, Hannah Oden-Brunson, Kate Kimbell +4 more

Ontogenetic Oxycodone Exposure Affects Early-Life Communicative Behaviors, Sensorimotor Reflexes, and Weight Trajectory in Mice

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.30.321372

N/A

0DataRank · unranked

3 citations

Simona Sarafinovska, Marwa O. Mikati, Kia M. Barclay, Katherine B. McCullough, Joseph D. Dougherty +3 more

Identification of compounds enhancing Aqp4 stop codon readthrough

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.01.363945

N/A

0DataRank · unranked

0 citations

Joseph D. Dougherty, Darshan Sapkota

Single-Cell Deconvolution of Head and Neck Squamous Cell Carcinoma

Cancers(2021)10.3390/cancers13061230

N/A

0DataRank · unranked

39 citations

Yating Liu, Michael Mints, Riley Mullins, Reilly A. Sample, Travis Law +10 more

Sex Differences in the Role of CNIH3 on Spatial Memory and Synaptic Plasticity

Biological Psychiatry(2021)10.1016/j.biopsych.2021.07.014

N/A

0DataRank · unranked

21 citations

Yukitoshi Izumi, Alexis N. Harris, Sidney B. Williams, Christopher Trousdale, Min-Yu Sun +8 more

Ontogenetic Oxycodone Exposure Affects Early Life Communicative Behaviors, Sensorimotor Reflexes, and Weight Trajectory in Mice

Frontiers in Behavioral Neuroscience(2021)10.3389/fnbeh.2021.615798

N/A

0DataRank · unranked

16 citations

Simona Sarafinovska, Marwa O. Mikati, Kia M. Barclay, Katherine B. McCullough, Joseph D. Dougherty +3 more

utr.annotation: a tool for annotating genomic variants that could influence post-transcriptional regulation

Bioinformatics(2021)10.1093/bioinformatics/btab635

N/A

0DataRank · unranked

9 citations

Joseph D. Dougherty, Yating Liu

A Cre-dependent massively parallel reporter assay allows for cell-type specific assessment of the functional effects of non-coding elements in vivo

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.17.444514

N/A

0DataRank · unranked

6 citations

Stephen P. Plassmeyer, Anthony D. Fischer, Ryan Z. Friedman, Michael A. Rieger, Din Selmanovic +7 more

Transcriptional-Regulatory Convergence Across Functional MDD Risk Variants Identified by Massively Parallel Reporter Assays

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.05.434177

N/A

0DataRank · unranked

4 citations

Joseph D. Dougherty, Bernard Mulvey

utR.annotation: a tool for annotating genomic variants that could influence post-transcriptional regulation

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.23.449510

N/A

0DataRank · unranked

1 citations

Joseph D. Dougherty, Yating Liu

Measuring Transcription Factor Binding and Gene Expression using Barcoded Self-Reporting Transposon Calling Cards and Transcriptomes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.15.439516

N/A

0DataRank · unranked

0 citations

Allen Yen, Urvashi Thopte, Fengping Dong, Arnav Moudgil, Xuhua Chen +4 more

Can the “female protective effect” liability threshold model explain sex differences in autism spectrum disorder?

Neuron(2022)10.1016/j.neuron.2022.06.020

N/A

0DataRank · unranked

60 citations

Natasha Marrus, Susan E. Maloney, Benjamin Hon Kei Yip, Sven Sandin, Tychele N. Turner +6 more

Aqp4 stop codon readthrough facilitates amyloid-β clearance from the brain

Brain(2022)10.1093/brain/awac199

N/A

0DataRank · unranked

51 citations

Colin P. Florian, Brookelyn M. Doherty, Kelli McFarland White, Kate M Reardon, Xia Ge +5 more

Activity-dependent translation dynamically alters the proteome of the perisynaptic astrocyte process

Cell Reports(2022)10.1016/j.celrep.2022.111474

N/A

0DataRank · unranked

49 citations

Mandy S. J. Kater, Kristina Sakers, Kayla R. Nygaard, Yating Liu, Sarah K. Koester +11 more

The Translational Landscape of SARS-CoV-2-infected Cells Reveals Suppression of Innate Immune Genes

mBio(2022)10.1128/mbio.00815-22

N/A

0DataRank · unranked

43 citations

Nakyung Lee, Kasyap Tenneti, Yiqing Wang, Hung R. Vuong, Yating Liu +10 more

MYT1L in the making: emerging insights on functions of a neurodevelopmental disorder gene

Translational Psychiatry(2022)10.1038/s41398-022-02058-x

N/A

0DataRank · unranked

26 citations

Allen Yen, Colin P. Florian, Joseph D. Dougherty, Jiayang Chen

Fluoxetine exposure throughout neurodevelopment differentially influences basilar dendritic morphology in the motor and prefrontal cortices

Scientific Reports(2022)10.1038/s41598-022-11614-w

N/A

0DataRank · unranked

9 citations

Dora R. Tabachnick, Christine Jakes, Selma Avdagic, Amy L. Bauernfeind, Joseph D. Dougherty +1 more

Measuring transcription factor binding and gene expression using barcoded self-reporting transposon calling cards and transcriptomes

NAR Genomics and Bioinformatics(2022)10.1093/nargab/lqac061

N/A

0DataRank · unranked

7 citations

Allen Yen, Urvashi Thopte, Fengping Dong, Arnav Moudgil, Xuhua Chen +4 more

A Proposed Role for Interactions between Argonautes, miRISC, and RNA Binding Proteins in the Regulation of Local Translation in Neurons and Glia

Journal of Neuroscience(2022)10.1523/jneurosci.2391-21.2022

N/A

0DataRank · unranked

10 citations

Joseph D. Dougherty, Sarah K. Koester

The Neurotoxin DSP-4 Dysregulates the Locus Coeruleus-Norepinephrine System and Recapitulates Molecular and Behavioral Aspects of Prodromal Neurodegenerative Disease

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.27.509797

N/A

0DataRank · unranked

9 citations

Michael A. Kelberman, Daniel J. Lustberg, Anu Korukonda, Katharine E McCann, Bernard Mulvey +6 more

MYT1L is required for suppressing earlier neuronal development programs in the adult mouse brain

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.17.512591

N/A

0DataRank · unranked

2 citations

Nicole A. Fuhler, Kazuma Noguchi, Joseph D. Dougherty, Jiayang Chen

Typical hippocampal transcriptional response across estrous is dysregulated by Cnih3 gene deletion

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.11.487915

N/A

0DataRank · unranked

0 citations

Hannah E. Frye, Tania Lintz, Stuart B. Fass, Eric Tycksen, Elliot C. Nelson +3 more

Social attention during object engagement: toward a cross-species measure of preferential social orienting

Journal of Neurodevelopmental Disorders(2022)10.1186/s11689-022-09467-5

N/A

0DataRank · unranked

0 citations

Nicole M. Hendrix, Jordan Albright, Joseph D. Dougherty, Kelly N. Botteron, John N. Constantino +2 more

Evaluation of gliovascular functions of AQP4 readthrough isoforms

Frontiers in Cellular Neuroscience(2023)10.3389/fncel.2023.1272391

N/A

0DataRank · unranked

22 citations

Kelli McFarland White, Stuart B. Fass, Siyu Chen, Zhan Shi, Xia Ge +11 more

Distinct disease mutations in DNMT3A result in a spectrum of behavioral, epigenetic, and transcriptional deficits

Cell Reports(2023)10.1016/j.celrep.2023.113411

N/A

0DataRank · unranked

20 citations

Xiyun Zhang, Dennis Y. Wu, Jenna R. Martin, Alyssa Erickson, Jane Valeriane Boua +18 more

MYT1L is required for suppressing earlier neuronal development programs in the adult mouse brain

Genome Research(2023)10.1101/gr.277413.122

N/A

0DataRank · unranked

25 citations

Nicole A. Fuhler, Kazuma Noguchi, Joseph D. Dougherty, Jiayang Chen

Tyrosinase-induced neuromelanin accumulation triggers rapid dysregulation and degeneration of the mouse locus coeruleus

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.07.530845

N/A

0DataRank · unranked

18 citations

Bernard Mulvey, Harris E. Blankenship, L. Cameron Liles, Amanda L. Sharpe, Jean-Francoise Pare +10 more

Relationship between sex biases in gene expression and sex biases in autism and Alzheimer’s disease

medRxiv(2023)10.1101/2023.08.29.23294773

N/A

0DataRank · unranked

6 citations

Bernard Mulvey, Wei Yang, Din Selmanovic, Sneha Chaturvedi, Eric Tycksen +3 more

Characterization of early markers of disease progression in the mouse model of Mucopolysaccharidosis IIIB

Research Square(2023)10.21203/rs.3.rs-3381843/v1

N/A

0DataRank · unranked

0 citations

Amanda Titus, Kate M Reardon, Sara Conyers, Joseph D. Dougherty, Xia Ge +5 more

Relationship between sex biases in gene expression and sex biases in autism and Alzheimer’s disease

Biology of Sex Differences(2024)10.1186/s13293-024-00622-2

N/A

0DataRank · unranked

24 citations

Bernard Mulvey, Rebecca Chase, Wei Yang, Din Selmanovic, Sneha Chaturvedi +4 more

Mice lacking Astn2 have ASD-like behaviors and altered cerebellar circuit properties

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2405901121

N/A

0DataRank · unranked

12 citations

Kayla Fernando, Susan E. Maloney, Zachi Horn, Shiaoching Gong, Kärt Mätlik +7 more

Parvalbumin expression does not account for discrete electrophysiological profiles of glutamatergic ventral pallidal subpopulations

Addiction Neuroscience(2024)10.1016/j.addicn.2024.100170

N/A

0DataRank · unranked

1 citations

Lisa Z. Fang, Jessica R. Tooley, Vani Kalyanaraman, M. Ständer, Darshan Sapkota +5 more

Mice lacking Astn2 have ASD-like behaviors and altered cerebellar circuit properties

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.18.580354

N/A

0DataRank · unranked

2 citations

Kayla Fernando, Susan E. Maloney, Shioaching Gong, Kärt Mätlik, Jiajia Zhao +6 more

A survey of hypothalamic phenotypes identifies molecular and behavioral consequences of MYT1L haploinsufficiency in male and female mice

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.25.625294

N/A

0DataRank · unranked

2 citations

Katherine B. McCullough, Sneha Chaturvedi, Din Selmanovic, Rebecca Chase, Jiayang Chen +5 more

Chromosomal and gonadal sex have differing effects on social motivation in mice

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.28.620727

N/A

0DataRank · unranked

1 citations

Simona Sarafinovska, Din Selmanovic, Katherine B. McCullough, Raylynn G. Swift, Susan E. Maloney +2 more

Neurodevelopmental Genetic Associations Across the Translational Space-Time Continuum

Biological Psychiatry(2024)10.1016/j.biopsych.2024.02.1010

N/A

0DataRank · unranked

0 citations

Joseph D. Dougherty, Mariam A. Gachechiladze

Immediately following the onset of active whisking, the input layer of barrel cortex exhibits a transient period of increased excitability that depends on prior experience

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.04.597353

N/A

0DataRank · unranked

0 citations

Lucy Tian, Bryan T. Higashikubo, Hudson Lin, Katheryn B. Lefton, Siyu Chen +5 more

A glial circadian gene expression atlas reveals cell-type and disease-specific reprogramming in response to amyloid pathology or aging

Nature Neuroscience(2025)10.1038/s41593-025-02067-1

N/A

0DataRank · unranked

7 citations

Stuart B. Fass, Darshan Sapkota, Sylvia Kang, Henry C Hollis, Jennifer H. Lawrence +8 more

Single-cell technology grows up: Leveraging high-resolution omics approaches to understand neurodevelopmental disorders

Current Opinion in Neurobiology(2025)10.1016/j.conb.2025.102990

N/A

0DataRank · unranked

3 citations

Simona Sarafinovska, Sneha Chaturvedi, Travis Law, Titilope M. Akinwe, Harrison W. Gabel +1 more

The striatal heterogeneous nuclear ribonucleoprotein H1 mRNA targetome associated with methamphetamine administration and behavior

Progress in Neuro-Psychopharmacology and Biological Psychiatry(2025)10.1016/j.pnpbp.2025.111598

N/A

0DataRank · unranked

1 citations

William B. Lynch, Rebecca H. Cole, Michael A. Rieger, Britahny M. Baskin, Sophia A. Miracle +15 more

A survey of hypothalamic phenotypes identifies molecular and behavioral consequences of MYT1L haploinsufficiency in male and female mice

Hormones and Behavior(2025)10.1016/j.yhbeh.2025.105796

N/A

0DataRank · unranked

1 citations

Katherine B. McCullough, Sneha Chaturvedi, Din Selmanovic, Rebecca Chase, Jiayang Chen +5 more

Chromosomal and gonadal sex have differing effects on social motivation in mice

Biology of Sex Differences(2025)10.1186/s13293-025-00690-y

N/A

0DataRank · unranked

2 citations

Simona Sarafinovska, Din Selmanovic, Katherine B. McCullough, Raylynn G. Swift, Susan E. Maloney +2 more

Approaches for identification of 5′ UTR mutations impacting translation and protein production from neurodevelopmental disorder genes

Cell Reports Methods(2025)10.1016/j.crmeth.2025.101247

N/A

0DataRank · unranked

1 citations

Colin P. Florian, Rebecca Chase, Michael J. Kasper, Shayna Mueller, Yating Liu +8 more

Antecedent enhancer activity predicts future susceptibility to seizures in mice

Nature Communications(2026)10.1038/s41467-025-65346-2

N/A

0DataRank · unranked

0 citations

Mariam A. Gachechiladze, Juanru Guo, Dylan A. Galloway, Shayna M. Mueller, Mark Shabsovich +10 more

Experience-Dependent Intrinsic Plasticity in Layer IV of Barrel Cortex at Whisking Onset

eNeuro(2025)10.1523/eneuro.0252-25.2025

N/A

0DataRank · unranked

0 citations

Lucy Tian, Bryan Higashikubo, Hudson Lin, Katheryn B. Lefton, Siyu Chen +5 more

Self-Reporting Transposons Enable Simultaneous Readout of Gene Expression and Transcription Factor Binding in Single Cells

Cell(2020)10.1016/j.cell.2020.06.037

N/A

0DataRank · unranked

100 citations

Michael Wilkinson, Xuhua Chen, June He, Alexander J. Cammack, Michael J. Vasek +8 more

Human iPSC-Derived Neurons and Cerebral Organoids Establish Differential Effects of Germline NF1 Gene Mutations

Stem Cell Reports(2020)10.1016/j.stemcr.2020.03.007

N/A

0DataRank · unranked

71 citations

Michelle L. Wegscheid, Kelly Hartigan, Jason B. Papke, Nathan Kopp, Jiayang Chen +4 more

CNS microRNA profiles: a database for cell type enriched microRNA expression across the mouse central nervous system

Scientific Reports(2020)10.1038/s41598-020-61307-5

N/A

0DataRank · unranked

41 citations

Yating Liu, Mariah L. Hoye, Joseph D. Dougherty, Timothy M. Miller, Nathan Pomper

DeepH&M: Estimating single-CpG hydroxymethylation and methylation levels from enrichment and restriction enzyme sequencing methods

Science Advances(2020)10.1126/sciadv.aba0521

N/A

0DataRank · unranked

9 citations

H. Josh Jang, Xiaoyun Xing, Daofeng Li, Michael J. Vasek, Joseph D. Dougherty +2 more

Functions of Gtf2i and Gtf2ird1 in the developing brain: transcription, DNA binding and long-term behavioral consequences

Human Molecular Genetics(2020)10.1093/hmg/ddaa070

N/A

0DataRank · unranked

39 citations

Kayla R. Nygaard, Yating Liu, Katherine B. McCullough, Susan E. Maloney, Harrison W. Gabel +2 more

A viral toolkit for recording transcription factor–DNA interactions in live mouse tissues

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.1918241117

N/A

0DataRank · unranked

27 citations

Arnav Moudgil, Jiayang Chen, Michael J. Vasek, Mark Shabsovich, Katherine B. McCullough +11 more

An inducible Cre mouse line to sparsely target nervous system cells, including Remak Schwann cells

Neural Development(2020)10.1186/s13064-020-00140-y

N/A

0DataRank · unranked

4 citations

Joseph D. Dougherty, Darshan Sapkota

High-throughput single-cell functional elucidation of neurodevelopmental disease–associated genes reveals convergent mechanisms altering neuronal differentiation

Genome Research(2020)10.1101/gr.262295.120

N/A

0DataRank · unranked

100 citations

Denis Avey, Joseph D. Dougherty, Jeffrey Milbrandt, Robi D. Mitra, Matthew A. Lalli

Joseph D. Dougherty

Indexed papers

Top data-sharing exemplar

Papers