Anne-Ruxandra Carvunis

Also affiliated with ETH Zurich

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

5.0Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Standardized annotation of translated open reading frames

Nature Biotechnology(2022)10.1038/s41587-022-01369-0

Top 7%

3.2DataRank

Top 7%252 citations

Jorge Ruiz-Orera, John R. Prensner, Marie A. Brunet, Ferriol Calvet, Irwin Jungreis +31 more

Papers

Driven by 21 papers — median percentile 86. Top paper: “Standardized annotation of translated open reading frames”.

Standardized annotation of translated open reading frames

Nature Biotechnology(2022)10.1038/s41587-022-01369-0

Top 7%

3.2DataRank

Top 7%252 citations

Jorge Ruiz-Orera, John R. Prensner, Marie A. Brunet, Ferriol Calvet, Irwin Jungreis +31 more

Revisiting the Saccharomyces cerevisiae predicted ORFeome

Genome Research(2008)10.1101/gr.076661.108

Top 14%

1.4DataRank

Top 14%32 citations

Anne-Ruxandra Carvunis, Gargi Dayama, Jing-Dong J. Han, Quan Zhong, Nicolas Simonis +14 more

Proto-genes and de novo gene birth

Nature(2012)10.1038/nature11184

N/A

0.983DataRank · unranked

699 citations

Thomas Rolland, Ilan Wapinski, Michael A. Calderwood, Muhammed A. Yildirim, Nicolas Simonis +14 more

A community-driven roadmap to advance research on translated open reading frames detected by Ribo-seq

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.10.447896

N/A

0.759DataRank · unranked

22 citations

Jorge Ruiz-Orera, John R. Prensner, Marie A. Brunet, Jose Manuel Gonzalez, Michele Magrane +23 more

Translon: a single term for translated regions

Nature Methods(2025)10.1038/s41592-025-02810-3

N/A

0.389DataRank · unranked

11 citations

Jack A. S. Tierney, M. Mar Albà, Dmitry E. Andreev, Julie L. Aspden, John F. Atkins +164 more

An expanded reference catalog of translated open reading frames for biomedical research

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.03.662928

Top 53%

0.319DataRank

Top 53%7 citations

Jorge Ruiz-Orera, Jack A. S. Tierney, Jim Clauwaert, Eric W. Deutsch, M. Mar Albà +41 more

On the illusion of auxotrophy: met15Δ yeast cells can grow on inorganic sulfur, thanks to the previously uncharacterized homocysteine synthase Yll058w

Journal of Biological Chemistry(2022)10.1016/j.jbc.2022.102697

N/A

0DataRank · unranked

10 citations

Saurin Bipin Parikh, Nelson Castilho Coelho, Aaron Wacholder, Ivan A. Belashov, Sara Zdancewicz +12 more

Elastic network modeling of cellular networks unveils sensor and effector genes that control information flow

PLoS Computational Biology(2022)10.1371/journal.pcbi.1010181

N/A

0DataRank · unranked

7 citations

She Zhang, İvet Bahar, Anne-Ruxandra Carvunis, Omer Acar

On the illusion of auxotrophy: met15Δ yeast cells can grow on inorganic sulfur thanks to the previously uncharacterized homocysteine synthase Yll058w

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.19.476918

N/A

0DataRank · unranked

5 citations

Saurin Bipin Parikh, Nelson Castilho Coelho, Aaron Wacholder, Ivan A. Belashov, Sara Zdancewicz +12 more

A vast evolutionarily transient translatome contributes to phenotype and fitness

Cell Systems(2023)10.1016/j.cels.2023.04.002

N/A

0DataRank · unranked

65 citations

Saurin Bipin Parikh, Nelson Castilho Coelho, Omer Acar, Carly Houghton, Lin Chou +2 more

Biological factors and statistical limitations prevent detection of most noncanonical proteins by mass spectrometry

PLoS Biology(2023)10.1371/journal.pbio.3002409

N/A

0DataRank · unranked

42 citations

Anne-Ruxandra Carvunis, Aaron Wacholder

Biological Factors and Statistical Limitations Prevent Detection of Most Noncanonical Proteins by Mass Spectrometry

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.09.531963

N/A

0DataRank · unranked

5 citations

Anne-Ruxandra Carvunis, Aaron Wacholder

Ancestral Sequence Reconstruction as a Tool to Detect and Study De Novo Gene Emergence

Genome Biology and Evolution(2024)10.1093/gbe/evae151

N/A

0DataRank · unranked

16 citations

Omer Acar, Vijay Cherupally, Anne-Ruxandra Carvunis, Nikolaos Vakirlis

Integrative detection of genome-wide translation using iRibo

STAR Protocols(2024)10.1016/j.xpro.2023.102826

N/A

0DataRank · unranked

5 citations

Jiwon Lee, Aaron Wacholder, Anne-Ruxandra Carvunis, Alistair Turcan

High-quality peptide evidence for annotating non-canonical open reading frames as human proteins

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.09.612016

N/A

0DataRank · unranked

35 citations

Leron W. Kok, Jonathan M. Mudge, Jorge Ruiz-Orera, Ivo Fierro-Monti, Zhi Sun +38 more

Constructive neutral evolution of homodimer to heterodimer transition

Trends in Biochemical Sciences(2024)10.1016/j.tibs.2024.10.003

N/A

0DataRank · unranked

1 citations

Carly Houghton, Aaron Wacholder, Anne-Ruxandra Carvunis, Lin Chou

De novo emergence of adaptive membrane proteins from thymine-rich genomic sequences

Nature Communications(2020)10.1038/s41467-020-14500-z

N/A

0DataRank · unranked

157 citations

Omer Acar, Brian Hsu, Nelson Castilho Coelho, S. Branden Van Oss, Aaron Wacholder +11 more

LI Detector: a framework for sensitive colony-based screens regardless of the distribution of fitness effects

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.27.175216

N/A

0DataRank · unranked

0 citations

Nelson Castilho Coelho, Anne-Ruxandra Carvunis, Saurin Bipin Parikh

LI Detector: a framework for sensitive colony-based screens regardless of the distribution of fitness effects

G3 Genes Genomes Genetics(2021)10.1093/g3journal/jkaa068

N/A

0DataRank · unranked

7 citations

Nelson Castilho Coelho, Anne-Ruxandra Carvunis, Saurin Bipin Parikh

A vast evolutionarily transient translatome contributes to phenotype and fitness

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.17.452746

N/A

0DataRank · unranked

8 citations

Saurin Bipin Parikh, Nelson Castilho Coelho, Omer Acar, Carly Houghton, Lin Chou +2 more

Elastic Network Modeling of Cellular Networks Unveils Sensor and Effector Genes that Control Information Flow

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.04.446730

N/A

0DataRank · unranked

0 citations

She Zhang, İvet Bahar, Anne-Ruxandra Carvunis, Omer Acar

Anne-Ruxandra Carvunis

Indexed papers

Top data-sharing exemplar

Papers