Chia‐en A. Chang

Also affiliated with University of California, Berkeley

Biochemistry, Genetics and Molecular BiologyComputer ScienceMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 25 papers. Top paper: “Insights Into Dynamics of Inhibitor and Ubiquitin-Like Protein Binding in SARS-CoV-2 Papain-Like Protease”.

Insights Into Dynamics of Inhibitor and Ubiquitin-Like Protein Binding in SARS-CoV-2 Papain-Like Protease

Frontiers in Molecular Biosciences(2020)10.3389/fmolb.2020.00174

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0DataRank · unranked

54 citations

Timothy Cholko, Yuan‐Chao Lou, Kuen‐Phon Wu, Chia‐en A. Chang, Yuliana K. Bosken

Amyloid-β (Aβ42) Peptide Aggregation Rate and Mechanism on Surfaces with Widely Varied Properties: Insights from Brownian Dynamics Simulations

The Journal of Physical Chemistry B(2020)10.1021/acs.jpcb.0c02926

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0DataRank · unranked

10 citations

Joseph Barnum, Chia‐en A. Chang, Timothy Cholko

Structure and noncanonical Cdk8 activation mechanism within an Argonaute-containing Mediator kinase module

Science Advances(2021)10.1126/sciadv.abd4484

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60 citations

Ti‐Chun Chao, Hee Jong Kim, Timothy Cholko, Shin-Fu Chen, Guojie Li +8 more

Discovery of antimicrobial agent targeting tryptophan synthase

Protein Science(2021)10.1002/pro.4236

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0DataRank · unranked

14 citations

Rizi Ai, E. Hilario, Rittik K. Ghosh, Michael F. Dunn, Shih‐hsin Kan +7 more

Molecular Mechanics Study of Flow and Surface Influence in Ligand–Protein Association

Frontiers in Molecular Biosciences(2021)10.3389/fmolb.2021.659687

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4 citations

Chia‐en A. Chang, Shivansh Kaushik

Imaging active site chemistry and protonation states: NMR crystallography of the tryptophan synthase α-aminoacrylate intermediate

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.12.443852

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0DataRank · unranked

0 citations

Viktoriia Liu, Bethany G. Caulkins, E. Hilario, Rittik K. Ghosh, Victoria N. Drago +20 more

Imaging active site chemistry and protonation states: NMR crystallography of the tryptophan synthase α-aminoacrylate intermediate

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2109235119

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0DataRank · unranked

49 citations

Viktoriia Liu, Bethany G. Caulkins, E. Hilario, Rittik K. Ghosh, Victoria N. Drago +20 more

Uncovering water effects in protein–ligand recognition: importance in the second hydration shell and binding kinetics

Physical Chemistry Chemical Physics(2022)10.1039/d2cp04584b

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26 citations

Huan He, Jing Wang, Jiahui Wang, Chia‐en A. Chang, Wei Chen

An Integrated Pharmacological, Structural, and Genetic Analysis of Extracellular Versus Intracellular ROS Production in Neutrophils

Journal of Molecular Biology(2022)10.1016/j.jmb.2022.167533

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0DataRank · unranked

10 citations

Ingred Riça, Jacob S. Kim, Yu‐ming M. Huang, Daniel Lim, Tanya Mitra +12 more

Binding Kinetics Toolkit for Analyzing Transient Molecular Conformations and Computing Free Energy Landscapes

The Journal of Physical Chemistry A(2022)10.1021/acs.jpca.2c05499

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8 citations

Ruben Montes, Jianan Sun, Sihan Chen, Zhiye Tang, Chia‐en A. Chang +1 more

Allosteric regulation of substrate channeling: Salmonella typhimurium tryptophan synthase

Frontiers in Molecular Biosciences(2022)10.3389/fmolb.2022.923042

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12 citations

E. Hilario, Chia‐en A. Chang, Leonard J. Mueller, Michael F. Dunn, Rittik K. Ghosh

Ritonavir and xk263 Binding-Unbinding with HIV-1 Protease: Pathways, Energy and Comparison

Life(2022)10.3390/life12010116

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0DataRank · unranked

8 citations

Mark Anthony V. Raymundo, Chia‐en A. Chang, Jianan Sun

What Strengthens Protein-Protein Interactions: Analysis and Applications of Residue Correlation Networks

Journal of Molecular Biology(2023)10.1016/j.jmb.2023.168337

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9 citations

Yun-Jung Hsieh, Wei-Lin Lu, Kuen‐Phon Wu, Chia‐en A. Chang, Ta I Hung

Key Amino Acid Residues of Mitochondrial Transcription Factor A Synergize with Abasic (AP) Site Dynamics To Facilitate AP-Lyase Reactions

ACS Chemical Biology(2023)10.1021/acschembio.3c00047

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0DataRank · unranked

8 citations

Wenyan Xu, Jin Tang, Shivansh Kaushik, Chia‐en A. Chang, Linlin Zhao +1 more

What Strengthens Protein-Protein Interactions: Analysis and Applications of Residue Correlation Networks

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.15.532709

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3 citations

Yun-Jung Hsieh, Wei-Lin Lu, Kuen‐Phon Wu, Chia‐en A. Chang, Ta I Hung

What Strengthens Protein-Protein Interactions: Analysis and Applications of Residue Correlation Networks

Research Square(2023)10.21203/rs.3.rs-2869897/v1

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0DataRank · unranked

0 citations

Ta I Hung, Yun-Jung Hsieh, Wei-Lin Lu, Kuen‐Phon Wu, Chia‐en A. Chang

MYC-Targeting Inhibitors Generated from a Stereodiversified Bicyclic Peptide Library

Journal of the American Chemical Society(2024)10.1021/jacs.3c09615

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25 citations

Yi Huang, Ta I Hung, Jianan Sun, Desiree Aispuro, Boxi Chen +9 more

DNA sequence and lesion-dependent mitochondrial transcription factor A (TFAM)-DNA-binding modulates DNA repair activities and products

Nucleic Acids Research(2024)10.1093/nar/gkae1144

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15 citations

Yu Hsuan Chen, Jin Tang, Ta I Hung, Guodong Zhang, Wenyan Xu +5 more

Molecular mechanics studies of factors affecting overall rate in cascade reactions: Multi‐enzyme colocalization and environment

Protein Science(2024)10.1002/pro.5175

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9 citations

Ta I Hung, Chia‐en A. Chang, Shivansh Kaushik

PROTAC-induced protein structural dynamics in targeted protein degradation

eLife(2024)10.7554/elife.101127

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0DataRank · unranked

4 citations

Ta I Hung, Chia‐en A. Chang, Kingsley Y Wu

PROTAC-induced Protein Functional Dynamics in Targeted Protein Degradation

eLife(2024)10.7554/elife.101127.1

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0DataRank · unranked

1 citations

Ta I Hung, Chia‐en A. Chang, Kingsley Y Wu

Sampling Conformational Ensembles of Highly Dynamic Proteins via Generative Deep Learning

Research Square(2024)10.21203/rs.3.rs-4301803/v1

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0DataRank · unranked

0 citations

Talant Ruzmetov, Ta I Hung, Saisri Padmaja Jonnalagedda, Sihan Chen, Parisa Fasihianifard +3 more

Sampling Conformational Ensembles of Highly Dynamic Proteins via Generative Deep Learning

Journal of Chemical Information and Modeling(2025)10.1021/acs.jcim.4c01838

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0DataRank · unranked

12 citations

Ta I Hung, Saisri Padmaja Jonnalagedda, Sihan Chen, Parisa Fasihianifard, Zhefeng Guo +3 more

Glutathionylated DNA adducts accumulate in mitochondrial DNA and are regulated by AP endonuclease 1 and tyrosyl-DNA phosphodiesterase 1

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2509312122

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0DataRank · unranked

2 citations

María Esperanza Valdés Sánchez, Ta I Hung, Jin Tang, Wenyan Xu, Jiekai Yin +6 more

Pathway Specific Unbinding Free Energy Profiles of Ritonavir Dissociation from HIV-1 Protease

Biochemistry(2025)10.1021/acs.biochem.4c00560

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0DataRank · unranked

0 citations

Jianan Sun, Chia‐en A. Chang, Emily Vig